AT3G07750 : -
Query Information
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AGICode AT3G07750
Description 3'-5'-exoribonuclease family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G07750 3'-5'-exoribonuclease family protein 1 0.31 -0.34
2 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 0.88 0.3 -0.34
3 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 0.86 0.32 -0.31
4 AT5G15550 Transducin/WD40 repeat-like superfamily protein 0.85 0.3 -0.32
5 AT5G14520 pescadillo-related 0.83 0.3 -0.32
6 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 0.82 0.31 -0.3
7 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.81 0.31 -0.31
8 AT2G40360 Transducin/WD40 repeat-like superfamily protein 0.81 0.32 -0.31
9 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.81 0.28 -0.3
10 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 0.8 0.32 -0.33
11 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.8 0.32 -0.31
12 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 0.8 0.3 -0.32
13 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.8 0.3 -0.32
14 AT5G06550 CONTAINS InterPro DOMAIN/s: Transcription factor
jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347),
F-box domain, Skp2-like (InterPro:IPR022364), Transcription
factor jumonji (InterPro:IPR013129); BEST Arabidopsis
thaliana protein match is: transferases, transferring
glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to
1747 proteins in 292 species: Archae - 0; Bacteria - 297;
Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink).		 0.8 0.32 -0.32
15 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.79 0.33 -0.3
16 AT1G75670 DNA-directed RNA polymerases 0.79 0.33 -0.33
17 AT1G04945 HIT-type Zinc finger family protein 0.79 0.31 -0.31
18 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.79 0.32 -0.31
19 AT3G26782 Tetratricopeptide repeat (TPR)-like superfamily protein 0.78 0.34 -0.3
20 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.78 0.31 -0.32
21 AT5G60730 Anion-transporting ATPase 0.77 0.31 -0.3
22 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.77 0.36 -0.31
23 AT1G27690 Protein of unknown function (DUF620) -0.77 0.32 -0.31
24 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.76 0.32 -0.31
25 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 0.76 0.31 -0.31
26 AT1G24764 microtubule-associated proteins 70-2 microtubule-associated proteins
70-2, microtubule-associated
proteins 70-2		 -0.76 0.3 -0.29
27 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 0.75 0.31 -0.32
28 AT1G61570 translocase of the inner mitochondrial membrane 13 translocase of the inner
mitochondrial membrane 13		 0.75 0.31 -0.33
29 AT1G02370 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.33 -0.34
30 AT2G40430 CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687),
Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has
709 Blast hits to 643 proteins in 201 species: Archae - 0;
Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45;
Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).		 0.75 0.32 -0.32
31 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.3 -0.3
32 AT1G30960 GTP-binding family protein 0.75 0.31 -0.31
33 AT3G11964 RNA binding;RNA binding 0.75 0.3 -0.33
34 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.74 0.3 -0.32
35 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.35 -0.31
36 AT4G38150 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.3 -0.3
37 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 -0.73 0.31 -0.34
38 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.73 0.32 -0.33
39 AT2G25355 PNAS-3 related 0.73 0.29 -0.31
40 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.73 0.34 -0.32
41 AT2G03670 cell division cycle 48B cell division cycle 48B 0.72 0.32 -0.33
42 AT1G04900 Protein of unknown function (DUF185) 0.72 0.32 -0.32
43 AT2G24500 Zinc finger protein 622 FZF 0.72 0.3 -0.32
44 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein 0.72 0.31 -0.31
45 AT3G09720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.3 -0.29
46 AT4G12750 Homeodomain-like transcriptional regulator 0.71 0.3 -0.3
47 AT1G07830 ribosomal protein L29 family protein 0.71 0.32 -0.31
48 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2		 0.71 0.31 -0.32
49 AT2G28450 zinc finger (CCCH-type) family protein 0.71 0.32 -0.32
50 AT2G30160 Mitochondrial substrate carrier family protein 0.71 0.32 -0.32
51 AT3G06330 RING/U-box superfamily protein -0.71 0.3 -0.31
52 AT5G12410 THUMP domain-containing protein 0.71 0.34 -0.31
53 AT4G30990 ARM repeat superfamily protein 0.71 0.33 -0.3
54 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.32 -0.31
55 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.3
56 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.71 0.32 -0.32
57 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein -0.69 0.31 -0.31
58 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 -0.69 0.31 -0.31
59 AT5G18100 copper/zinc superoxide dismutase 3 copper/zinc superoxide dismutase 3 -0.68 0.3 -0.32
60 AT2G23780 RING/U-box superfamily protein -0.67 0.32 -0.35
61 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).		 -0.66 0.31 -0.3
62 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 -0.66 0.29 -0.31
63 AT3G49060 U-box domain-containing protein kinase family protein -0.65 0.31 -0.33
64 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.31 -0.31
65 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.65 0.31 -0.33
66 AT5G07080 HXXXD-type acyl-transferase family protein -0.64 0.31 -0.32
67 AT3G61430 plasma membrane intrinsic protein 1A ARABIDOPSIS THALIANA PLASMA
MEMBRANE INTRINSIC PROTEIN 1,
PLASMA MEMBRANE INTRINSIC PROTEIN
1, PLASMA MEMBRANE INTRINSIC
PROTEIN 1;1, plasma membrane
intrinsic protein 1A		 -0.64 0.31 -0.32
68 AT1G33780 Protein of unknown function (DUF179) -0.64 0.33 -0.3
69 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 -0.64 0.3 -0.3
70 AT1G79420 Protein of unknown function (DUF620) -0.63 0.32 -0.3
71 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.63 0.34 -0.29
72 AT3G19000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.31 -0.32
73 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 -0.63 0.3 -0.32
74 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.63 0.31 -0.3
75 AT1G57870 shaggy-like kinase 42 shaggy-like kinase 42, shaggy-like
kinase 42		 -0.63 0.34 -0.32
76 AT2G44850 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0565
(InterPro:IPR018881); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast
hits to 138 proteins in 53 species: Archae - 0; Bacteria -
0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.63 0.32 -0.3
77 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 -0.62 0.3 -0.3
78 AT1G49740 PLC-like phosphodiesterases superfamily protein -0.62 0.32 -0.31
79 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.62 0.34 -0.31
80 AT5G14500 aldose 1-epimerase family protein -0.62 0.3 -0.33
81 AT3G58350 RESTRICTED TEV MOVEMENT 3 RESTRICTED TEV MOVEMENT 3 -0.61 0.32 -0.32
82 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.61 0.32 -0.33
83 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.6 0.32 -0.31
84 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 -0.59 0.31 -0.32
85 AT5G66420 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP033271 (InterPro:IPR008322), TIM-barrel signal
transduction protein, predicted (InterPro:IPR009215); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.33 -0.3
86 AT3G18295 Protein of unknown function (DUF1639) -0.58 0.32 -0.31
87 AT5G67150 HXXXD-type acyl-transferase family protein -0.58 0.32 -0.32
88 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 -0.58 0.3 -0.33
89 AT3G15353 metallothionein 3 ATMT3, metallothionein 3 -0.58 0.33 -0.31