AT1G12370 : photolyase 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G12370
Description photolyase 1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G12370 photolyase 1 photolyase 1, UV RESISTANCE 2 1 0.3 -0.3
2 AT5G67150 HXXXD-type acyl-transferase family protein -0.77 0.33 -0.31
3 AT3G14890 phosphoesterase 0.76 0.3 -0.32
4 AT3G50270 HXXXD-type acyl-transferase family protein -0.76 0.32 -0.32
5 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3		 -0.72 0.31 -0.32
6 AT3G14100 RNA-binding (RRM/RBD/RNP motifs) family protein -0.72 0.31 -0.32
7 AT3G01360 Family of unknown function (DUF716) -0.71 0.31 -0.3
8 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.71 0.33 -0.34
9 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.32 -0.32
10 AT2G23380 SET domain-containing protein CURLY LEAF, INCURVATA 1, SETDOMAIN
GROUP 1, SETDOMAIN 1		 0.7 0.33 -0.3
11 AT4G28990 RNA-binding protein-related 0.69 0.35 -0.29
12 AT4G28020 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0066
(InterPro:IPR001378); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.69 0.31 -0.3
13 AT1G17340 Phosphoinositide phosphatase family protein -0.69 0.31 -0.31
14 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 0.68 0.32 -0.32
15 AT5G54250 cyclic nucleotide-gated cation channel 4 cyclic nucleotide-gated cation
channel 4, cyclic nucleotide-gated
cation channel 4, DEFENSE, NO
DEATH 2, HLM1		 -0.68 0.34 -0.3
16 AT3G54480 SKP1/ASK-interacting protein 5 SKP1/ASK-interacting protein 5,
SKP5		 -0.67 0.31 -0.31
17 AT2G36290 alpha/beta-Hydrolases superfamily protein 0.67 0.34 -0.33
18 AT5G19530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ACAULIS 5 0.67 0.31 -0.3
19 AT2G18120 SHI-related sequence 4 SHI-related sequence 4 0.67 0.31 -0.31
20 AT3G50880 DNA glycosylase superfamily protein -0.67 0.3 -0.32
21 AT1G47670 Transmembrane amino acid transporter family protein 0.67 0.32 -0.32
22 AT5G23810 amino acid permease 7 amino acid permease 7 -0.66 0.31 -0.3
23 AT1G28320 protease-related DEG15 -0.66 0.32 -0.29
24 AT1G56700 Peptidase C15, pyroglutamyl peptidase I-like -0.66 0.31 -0.31
25 AT1G67560 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
6, lipoxygenase 6		 -0.66 0.31 -0.32
26 AT5G17210 Protein of unknown function (DUF1218) 0.66 0.31 -0.31
27 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.66 0.31 -0.32
28 AT2G32520 alpha/beta-Hydrolases superfamily protein -0.65 0.3 -0.31
29 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.65 0.3 -0.35
30 AT1G22040 Galactose oxidase/kelch repeat superfamily protein -0.65 0.33 -0.27
31 AT4G36610 alpha/beta-Hydrolases superfamily protein 0.65 0.33 -0.31
32 AT1G16900 Alg9-like mannosyltransferase family 0.65 0.32 -0.33
33 AT1G05060 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.33 -0.3
34 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 -0.65 0.32 -0.33
35 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.3
36 AT1G20440 cold-regulated 47 AtCOR47, cold-regulated 47, RD17 0.64 0.29 -0.31
37 AT1G53650 CTC-interacting domain 8 CTC-interacting domain 8 -0.64 0.34 -0.31
38 AT2G21050 like AUXIN RESISTANT 2 like AUXIN RESISTANT 2 0.64 0.34 -0.31
39 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.64 0.33 -0.32
40 AT4G10890 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2439 (InterPro:IPR018838); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.32 -0.32
41 AT3G14920 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 -0.64 0.29 -0.31
42 AT2G44760 Domain of unknown function (DUF3598) -0.64 0.3 -0.32
43 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.64 0.33 -0.3
44 AT5G42470 CONTAINS InterPro DOMAIN/s: Brain/reproductive
organ-expressed protein (InterPro:IPR010358); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.64 0.31 -0.3
45 AT1G03905 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette I19 0.64 0.32 -0.3
46 AT5G61520 Major facilitator superfamily protein -0.64 0.29 -0.32
47 AT4G17280 Auxin-responsive family protein 0.64 0.31 -0.3
48 AT1G01490 Heavy metal transport/detoxification superfamily protein -0.64 0.32 -0.3
49 AT5G57110 autoinhibited Ca2+ -ATPase, isoform 8 autoinhibited Ca2+ -ATPase,
isoform 8, AUTOINHIBITED CA2+
-ATPASE, ISOFORM 8		 0.63 0.3 -0.33
50 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 -0.63 0.34 -0.29
51 AT5G65670 indole-3-acetic acid inducible 9 indole-3-acetic acid inducible 9 0.63 0.32 -0.34
52 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 -0.63 0.32 -0.34
53 AT4G25320 AT hook motif DNA-binding family protein 0.63 0.29 -0.31
54 AT1G78100 F-box family protein auxin up-regulated f-box protein 1 0.63 0.33 -0.3
55 AT3G06580 Mevalonate/galactokinase family protein GALACTOSE KINASE 1, GALK -0.63 0.3 -0.33
56 AT1G12580 phosphoenolpyruvate carboxylase-related kinase 1 phosphoenolpyruvate
carboxylase-related kinase 1		 0.63 0.31 -0.31
57 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 -0.63 0.33 -0.32
58 AT1G05910 cell division cycle protein 48-related / CDC48-related 0.63 0.32 -0.32
59 AT2G38660 Amino acid dehydrogenase family protein -0.62 0.29 -0.3
60 AT5G41040 HXXXD-type acyl-transferase family protein 0.62 0.32 -0.31
61 AT2G16940 Splicing factor, CC1-like 0.62 0.33 -0.31
62 AT1G35470 SPla/RYanodine receptor (SPRY) domain-containing protein -0.62 0.31 -0.31
63 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1		 0.62 0.31 -0.32
64 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.62 0.31 -0.33
65 AT1G08680 ARF GAP-like zinc finger-containing protein ZIGA4 ARF-GAP domain 14, ARF GAP-like
zinc finger-containing protein
ZIGA4		 -0.62 0.3 -0.32
66 AT5G19120 Eukaryotic aspartyl protease family protein -0.61 0.32 -0.33
67 AT3G04620 Alba DNA/RNA-binding protein D NUCLDUO1-ACTIVATEEIC ACID
BINDING PROTEIN 1		 0.61 0.3 -0.33
68 AT5G62650 Tic22-like family protein -0.61 0.29 -0.33
69 AT1G69180 Plant-specific transcription factor YABBY family protein CRABS CLAW 0.61 0.3 -0.32
70 AT1G12240 Glycosyl hydrolases family 32 protein ATBETAFRUCT4, VACUOLAR INVERTASE -0.61 0.33 -0.32
71 AT1G17980 poly(A) polymerase 1 poly(A) polymerase 1 -0.61 0.31 -0.31
72 AT4G38130 histone deacetylase 1 ARABIDOPSIS HISTONE DEACETYLASE 1,
ARABIDOPSIS HISTONE DEACETYLASE
19, histone deacetylase 1, HDA1,
HISTONE DEACETYLASE 19, RPD3A		 0.61 0.3 -0.33
73 AT3G59800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast
hits to 8061 proteins in 537 species: Archae - 2; Bacteria
- 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses
- 49; Other Eukaryotes - 4961 (source: NCBI BLink).		 0.61 0.32 -0.3
74 AT5G01010 CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has
172 Blast hits to 172 proteins in 43 species: Archae - 0;
Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 63; Viruses
- 0; Other Eukaryotes - 14 (source: NCBI BLink).		 -0.61 0.33 -0.33
75 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.61 0.32 -0.32
76 AT1G10150 Carbohydrate-binding protein -0.6 0.28 -0.31
77 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.6 0.29 -0.34
78 AT5G62680 Major facilitator superfamily protein -0.6 0.31 -0.32
79 AT1G10540 nucleobase-ascorbate transporter 8 ATNAT8, nucleobase-ascorbate
transporter 8		 -0.6 0.34 -0.3
80 AT1G19880 Regulator of chromosome condensation (RCC1) family protein 0.6 0.3 -0.32
81 AT5G40390 Raffinose synthase family protein raffinose synthase 5, seed
imbibition 1-like		 0.6 0.32 -0.33
82 AT5G58490 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.31 -0.3
83 AT3G02700 NC domain-containing protein-related -0.59 0.31 -0.32
84 AT1G68670 myb-like transcription factor family protein -0.59 0.31 -0.31
85 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 0.59 0.33 -0.3
86 AT1G68850 Peroxidase superfamily protein 0.59 0.32 -0.31
87 AT1G19670 chlorophyllase 1 chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1,
chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1		 -0.59 0.31 -0.31
88 AT5G09520 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 2 0.59 0.32 -0.32
89 AT5G42750 BRI1 kinase inhibitor 1 BRI1 kinase inhibitor 1 -0.59 0.31 -0.3
90 AT1G57600 MBOAT (membrane bound O-acyl transferase) family protein -0.59 0.31 -0.28
91 AT5G64500 Major facilitator superfamily protein -0.59 0.32 -0.33
92 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 -0.58 0.3 -0.33
93 AT5G05800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.32 -0.32
94 AT2G46490 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits
to 34 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.32 -0.32
95 AT3G18270 cytochrome P450, family 77, subfamily A, polypeptide 5
pseudogene		 cytochrome P450, family 77,
subfamily A, polypeptide 5
pseudogene		 -0.58 0.31 -0.31
96 AT3G28920 homeobox protein 34 homeobox protein 34, homeobox
protein 34, ZINC FINGER
HOMEODOMAIN 9		 -0.58 0.3 -0.29
97 AT2G27590 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.58 0.33 -0.3
98 AT5G50720 HVA22 homologue E ARABIDOPSIS THALIANA HVA22
HOMOLOGUE E, HVA22 homologue E		 0.58 0.3 -0.31
99 AT3G25640 Protein of unknown function, DUF617 0.58 0.33 -0.32
100 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
I		 0.57 0.31 -0.32
101 AT2G19580 tetraspanin2 tetraspanin2 0.57 0.33 -0.32
102 AT4G14560 indole-3-acetic acid inducible AUXIN RESISTANT 5, indole-3-acetic
acid inducible		 0.57 0.31 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		0.86 0.43 -0.46 C0093
104 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - -0.76 0.46 -0.45
105 C0070 Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl)xylosyl) 6''-O-(p-O-coumaroyl) glucoside] 5-O-[6''''-O-(malonyl) glucoside] - - - -0.76 0.43 -0.46
106 C0071 Cyanidin 3-O-[2''-O-(6'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-(6''''-O-malonyl) glucoside - - - -0.75 0.44 -0.44
107 C0177 MST_2429.6 - - - -0.64 0.44 -0.46
108 C0009 myo-Inositol - myo-Inositol stachyose biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
D-myo-inositol (1,4,5)-trisphosphate degradation,
galactosylcyclitol biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
phytate degradation I,
myo-inositol biosynthesis,
ajugose biosynthesis I (galactinol-dependent),
phospholipid biosynthesis II 		-0.63 0.45 -0.44 C0009
109 C0196 Phosphatidylcholine-34:3 - Phosphatidylcholine-34:3 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		-0.58 0.46 -0.48 C0196