AT1G52280 : RAB GTPase homolog G3D
Query Information
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AGICode AT1G52280
Description RAB GTPase homolog G3D
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G52280 RAB GTPase homolog G3D RAB GTPase homolog G3D, RAB GTPase
homolog G3D		 1 0.31 -0.3
2 AT1G28580 GDSL-like Lipase/Acylhydrolase superfamily protein -0.71 0.28 -0.31
3 AT3G53210 nodulin MtN21 /EamA-like transporter family protein -0.71 0.33 -0.31
4 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 0.68 0.31 -0.33
5 AT3G09540 Pectin lyase-like superfamily protein 0.66 0.32 -0.3
6 AT5G60460 Preprotein translocase Sec, Sec61-beta subunit protein -0.65 0.3 -0.32
7 AT5G03345 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Magnesium transporter (InterPro:IPR018937); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.31 -0.3
8 AT3G59800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast
hits to 8061 proteins in 537 species: Archae - 2; Bacteria
- 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses
- 49; Other Eukaryotes - 4961 (source: NCBI BLink).		 0.64 0.34 -0.31
9 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.64 0.31 -0.34
10 AT3G06035 Glycoprotein membrane precursor GPI-anchored 0.64 0.32 -0.31
11 AT3G07090 PPPDE putative thiol peptidase family protein 0.63 0.3 -0.32
12 AT5G41140 Myosin heavy chain-related protein 0.63 0.3 -0.33
13 AT3G27820 monodehydroascorbate reductase 4 MONODEHYDROASCORBATE REDUCTASE 4,
monodehydroascorbate reductase 4		 -0.63 0.33 -0.32
14 AT1G09010 glycoside hydrolase family 2 protein -0.63 0.3 -0.31
15 AT1G31820 Amino acid permease family protein -0.63 0.35 -0.31
16 AT1G13560 aminoalcoholphosphotransferase 1 aminoalcoholphosphotransferase 1,
ATAAPT1		 0.62 0.32 -0.31
17 AT5G42570 B-cell receptor-associated 31-like 0.62 0.31 -0.3
18 AT5G19930 Protein of unknown function DUF92, transmembrane 0.62 0.31 -0.32
19 AT4G05520 EPS15 homology domain 2 EPS15 homology domain 2, EPS15
homology domain 2		 0.61 0.32 -0.3
20 AT5G06970 Protein of unknown function (DUF810) 0.61 0.3 -0.3
21 AT3G53260 phenylalanine ammonia-lyase 2 ATPAL2, phenylalanine
ammonia-lyase 2		 0.61 0.32 -0.32
22 AT2G16860 GCIP-interacting family protein 0.61 0.33 -0.3
23 AT5G64600 O-fucosyltransferase family protein 0.61 0.33 -0.31
24 AT2G26830 Protein kinase superfamily protein embryo defective 1187 0.61 0.28 -0.32
25 AT3G60690 SAUR-like auxin-responsive protein family -0.6 0.32 -0.32
26 AT5G18840 Major facilitator superfamily protein -0.6 0.32 -0.3
27 AT5G63990 Inositol monophosphatase family protein 0.6 0.34 -0.31
28 AT4G05450 mitochondrial ferredoxin 1 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 1, mitochondrial
ferredoxin 1		 0.6 0.3 -0.31
29 AT5G11090 serine-rich protein-related -0.6 0.31 -0.32
30 AT4G22580 Exostosin family protein 0.59 0.32 -0.31
31 AT3G55940 Phosphoinositide-specific phospholipase C family protein 0.59 0.32 -0.31
32 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.59 0.3 -0.32
33 AT1G62330 O-fucosyltransferase family protein 0.59 0.32 -0.31
34 AT4G38960 B-box type zinc finger family protein 0.59 0.3 -0.33
35 AT4G32140 EamA-like transporter family 0.59 0.31 -0.32
36 AT4G34030 3-methylcrotonyl-CoA carboxylase 3-methylcrotonyl-CoA carboxylase -0.58 0.31 -0.33
37 AT5G20620 ubiquitin 4 ubiquitin 4 -0.58 0.31 -0.31
38 AT5G54250 cyclic nucleotide-gated cation channel 4 cyclic nucleotide-gated cation
channel 4, cyclic nucleotide-gated
cation channel 4, DEFENSE, NO
DEATH 2, HLM1		 -0.58 0.31 -0.31
39 AT4G38400 expansin-like A2 expansin-like A2, ATEXPL2, ATHEXP
BETA 2.2, expansin-like A2,
EXPANSIN L2		 0.58 0.31 -0.34
40 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 0.58 0.31 -0.3
41 AT5G36890 beta glucosidase 42 beta glucosidase 42 0.58 0.32 -0.32
42 AT5G42280 Cysteine/Histidine-rich C1 domain family protein 0.57 0.34 -0.32
43 AT5G37850 pfkB-like carbohydrate kinase family protein SALT OVERLY SENSITIVE 4, SALT
OVERLY SENSITIVE 4		 0.57 0.34 -0.31
44 AT1G64490 DEK, chromatin associated protein 0.57 0.3 -0.33
45 AT1G59600 ZCW7 ZCW7 0.57 0.29 -0.33
46 AT5G45840 Leucine-rich repeat protein kinase family protein 0.57 0.34 -0.31
47 AT1G60090 beta glucosidase 4 beta glucosidase 4 -0.56 0.33 -0.3
48 AT3G44240 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.56 0.31 -0.31
49 AT1G75150 unknown protein; Has 38228 Blast hits to 24529 proteins in
1168 species: Archae - 169; Bacteria - 4103; Metazoa -
14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other
Eukaryotes - 11318 (source: NCBI BLink).		 0.56 0.32 -0.34
50 AT4G40000 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.56 0.32 -0.32
51 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.56 0.3 -0.32
52 AT1G20160 Subtilisin-like serine endopeptidase family protein ATSBT5.2 -0.56 0.35 -0.33
53 AT4G39480 cytochrome P450, family 96, subfamily A, polypeptide 9 cytochrome P450, family 96,
subfamily A, polypeptide 9		 -0.55 0.32 -0.3
54 AT1G68670 myb-like transcription factor family protein -0.55 0.33 -0.31
55 AT3G56630 cytochrome P450, family 94, subfamily D, polypeptide 2 cytochrome P450, family 94,
subfamily D, polypeptide 2		 -0.55 0.31 -0.31
56 AT3G12120 fatty acid desaturase 2 fatty acid desaturase 2 -0.55 0.34 -0.31
57 AT1G65350 ubiquitin 13 ubiquitin 13 -0.55 0.31 -0.3
58 AT4G00720 shaggy-like protein kinase 32 SHAGGY-LIKE PROTEIN KINASE THETA,
shaggy-like protein kinase 32,
shaggy-like protein kinase 32		 -0.54 0.3 -0.31
59 AT1G31350 KAR-UP F-box 1 KAR-UP F-box 1 -0.54 0.34 -0.3
60 AT1G49220 RING/U-box superfamily protein 0.54 0.32 -0.3
61 AT4G31770 debranching enzyme 1 ARABIDOPSIS THALIANA DEBRANCHING
ENZYME 1, debranching enzyme 1		 0.54 0.32 -0.31
62 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 0.53 0.33 -0.33
63 AT1G02950 glutathione S-transferase F4 glutathione S-transferase F4,
GLUTATHIONE S-TRANSFERASE 31,
glutathione S-transferase F4		 0.53 0.32 -0.32
64 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 -0.53 0.3 -0.32
65 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 -0.53 0.3 -0.31
66 AT4G35987 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.53 0.33 -0.34
67 AT5G17240 SET domain group 40 SET domain group 40 0.53 0.32 -0.3
68 AT5G64450 BEST Arabidopsis thaliana protein match is: Putative
endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.53 0.29 -0.31
69 AT5G32460 Transcriptional factor B3 family protein -0.53 0.31 -0.33
70 AT4G25020 D111/G-patch domain-containing protein 0.53 0.34 -0.33
71 AT2G36490 demeter-like 1 demeter-like 1, REPRESSOR OF
SILENCING1		 -0.51 0.31 -0.32
72 AT1G06520 glycerol-3-phosphate acyltransferase 1 ATGPAT1, glycerol-3-phosphate
acyltransferase 1		 -0.51 0.34 -0.34
73 AT5G66380 folate transporter 1 folate transporter 1, folate
transporter 1		 -0.51 0.31 -0.33
74 AT5G42750 BRI1 kinase inhibitor 1 BRI1 kinase inhibitor 1 -0.5 0.3 -0.31
75 AT5G35890 Beta-galactosidase related protein -0.5 0.31 -0.3
76 AT3G16640 translationally controlled tumor protein translationally controlled tumor
protein		 -0.5 0.33 -0.32
77 AT5G61520 Major facilitator superfamily protein -0.5 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.8 0.42 -0.44 C0033
79 C0178 MST_2446.7 - - - -0.73 0.45 -0.45