AT1G71340 : AtGDPD4
Query Information
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AGICode AT1G71340
Description PLC-like phosphodiesterases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 1 0.3 -0.3
2 AT5G50130 NAD(P)-binding Rossmann-fold superfamily protein 0.7 0.29 -0.3
3 AT5G42280 Cysteine/Histidine-rich C1 domain family protein 0.68 0.32 -0.34
4 AT1G69550 disease resistance protein (TIR-NBS-LRR class) 0.67 0.33 -0.33
5 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 0.67 0.3 -0.32
6 AT1G79000 histone acetyltransferase of the CBP family 1 ARABIDOPSIS HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 1, ARABIDOPSIS THALIANA
P300/CBP ACETYLTRANSFERASE-RELATED
PROTEIN 2, histone
acetyltransferase of the CBP
family 1, P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
2		 0.66 0.32 -0.3
7 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.66 0.3 -0.32
8 AT5G40950 ribosomal protein large subunit 27 ribosomal protein large subunit 27 0.65 0.34 -0.32
9 AT5G10140 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 25, FLC, FLOWERING
LOCUS C, FLOWERING LOCUS F		 0.65 0.31 -0.31
10 AT3G46900 copper transporter 2 copper transporter 2 0.65 0.31 -0.29
11 AT1G61040 plus-3 domain-containing protein vernalization independence 5 -0.64 0.33 -0.33
12 AT1G79970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF581)
(TAIR:AT2G25690.2); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.35 -0.32
13 AT5G41140 Myosin heavy chain-related protein 0.62 0.29 -0.32
14 AT1G07180 alternative NAD(P)H dehydrogenase 1 ARABIDOPSIS THALIANA INTERNAL
NON-PHOSPHORYLATING NAD ( P ) H
DEHYDROGENASE, alternative
NAD(P)H dehydrogenase 1		 0.62 0.31 -0.33
15 AT1G57770 FAD/NAD(P)-binding oxidoreductase family protein 0.62 0.31 -0.31
16 AT5G26740 Protein of unknown function (DUF300) -0.62 0.31 -0.33
17 AT5G23020 2-isopropylmalate synthase 2 2-isopropylmalate synthase 2,
METHYLTHIOALKYMALATE
SYNTHASE-LIKE, MAM3		 -0.62 0.29 -0.31
18 AT4G11080 HMG (high mobility group) box protein 3xHigh Mobility Group-box1 0.62 0.3 -0.32
19 AT5G27270 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 976 0.62 0.31 -0.3
20 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 -0.61 0.33 -0.31
21 AT1G61820 beta glucosidase 46 beta glucosidase 46 -0.61 0.29 -0.32
22 AT5G46200 Protein of Unknown Function (DUF239) 0.61 0.32 -0.3
23 AT5G06480 Immunoglobulin E-set superfamily protein 0.6 0.3 -0.3
24 AT5G40910 Disease resistance protein (TIR-NBS-LRR class) family 0.6 0.34 -0.31
25 AT4G12460 OSBP(oxysterol binding protein)-related protein 2B OSBP(oxysterol binding
protein)-related protein 2B		 0.6 0.29 -0.33
26 AT5G24620 Pathogenesis-related thaumatin superfamily protein 0.6 0.32 -0.32
27 AT5G10620 methyltransferases 0.6 0.32 -0.3
28 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.6 0.32 -0.31
29 AT1G78310 VQ motif-containing protein -0.59 0.33 -0.32
30 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 -0.58 0.32 -0.34
31 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein -0.58 0.33 -0.31
32 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.58 0.32 -0.33
33 AT4G22330 Alkaline phytoceramidase (aPHC) ATCES1 -0.58 0.32 -0.31
34 AT1G31290 ARGONAUTE 3 ARGONAUTE 3 -0.58 0.32 -0.3
35 AT5G65470 O-fucosyltransferase family protein 0.57 0.32 -0.3
36 AT3G54500 BEST Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183
Blast hits to 175 proteins in 44 species: Archae - 0;
Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120;
Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).		 0.57 0.31 -0.3
37 AT5G64780 Uncharacterised conserved protein UCP009193 0.57 0.31 -0.31
38 AT1G75710 C2H2-like zinc finger protein 0.57 0.34 -0.32
39 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.33 -0.32
40 AT3G09690 alpha/beta-Hydrolases superfamily protein -0.56 0.3 -0.31
41 AT3G43990 Bromo-adjacent homology (BAH) domain-containing protein 0.56 0.31 -0.32
42 AT4G34880 Amidase family protein -0.56 0.33 -0.33
43 AT5G48690 CONTAINS InterPro DOMAIN/s:
Ubiquitin-associated/translation elongation factor EF1B,
N-terminal, eukaryote (InterPro:IPR015940), PUB domain
(InterPro:IPR018997), PUG domain (InterPro:IPR006567),
UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana
protein match is: ubiquitin-associated (UBA)/TS-N
domain-containing protein (TAIR:AT1G04850.1); Has 7001
Blast hits to 5165 proteins in 492 species: Archae - 9;
Bacteria - 505; Metazoa - 2653; Fungi - 905; Plants - 287;
Viruses - 19; Other Eukaryotes - 2623 (source: NCBI BLink).		 0.56 0.34 -0.33
44 AT5G19950 Domain of unknown function (DUF1767) -0.56 0.31 -0.33
45 AT1G53360 F-box associated ubiquitination effector family protein 0.56 0.32 -0.36
46 AT3G15610 Transducin/WD40 repeat-like superfamily protein -0.55 0.33 -0.32
47 AT1G47790 F-box and associated interaction domains-containing protein 0.55 0.32 -0.33
48 AT3G13220 ABC-2 type transporter family protein ATP-binding cassette G26,
AtABCG26, MSR02, WBC27		 -0.55 0.31 -0.3
49 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 0.55 0.31 -0.31
50 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.55 0.3 -0.3
51 AT1G64300 Protein kinase family protein 0.55 0.32 -0.32
52 AT5G28920 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.54 0.3 -0.33
53 AT4G26770 Phosphatidate cytidylyltransferase family protein -0.54 0.31 -0.33
54 AT1G68640 bZIP transcription factor family protein PERIANTHIA 0.54 0.33 -0.3
55 AT4G09760 Protein kinase superfamily protein 0.54 0.3 -0.32
56 AT5G14340 myb domain protein 40 myb domain protein 40, myb domain
protein 40		 -0.54 0.31 -0.31
57 AT2G20030 RING/U-box superfamily protein -0.54 0.31 -0.31
58 AT3G42250 transposable element gene 0.54 0.32 -0.3
59 AT4G12840 Protein of unknown function (DUF707) 0.54 0.3 -0.34
60 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 0.53 0.31 -0.34
61 ATMG01350 hypothetical protein ORF145C -0.53 0.31 -0.3
62 AT2G11940 transposable element gene -0.53 0.31 -0.32
63 AT1G80960 F-box and Leucine Rich Repeat domains containing protein 0.53 0.34 -0.31
64 AT2G40310 Pectin lyase-like superfamily protein 0.53 0.31 -0.34
65 AT5G52680 Copper transport protein family -0.53 0.33 -0.32
66 AT3G20980 Gag-Pol-related retrotransposon family protein 0.53 0.29 -0.34
67 AT5G60610 F-box/RNI-like superfamily protein -0.52 0.31 -0.3
68 AT5G46040 Major facilitator superfamily protein -0.52 0.32 -0.3
69 AT1G50800 BEST Arabidopsis thaliana protein match is: Plant mobile
domain protein family (TAIR:AT1G50790.1); Has 38 Blast hits
to 34 proteins in 9 species: Archae - 0; Bacteria - 4;
Metazoa - 2; Fungi - 2; Plants - 26; Viruses - 1; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.52 0.32 -0.32
70 AT5G05710 Pleckstrin homology (PH) domain superfamily protein -0.52 0.31 -0.31
71 AT4G36380 Cytochrome P450 superfamily protein ROTUNDIFOLIA 3 -0.52 0.31 -0.32
72 AT3G23010 receptor like protein 36 receptor like protein 36, receptor
like protein 36		 0.52 0.33 -0.31
73 AT2G32930 zinc finger nuclease 2 zinc finger nuclease 2 -0.52 0.31 -0.29
74 AT5G35840 phytochrome C phytochrome C 0.52 0.3 -0.31
75 AT1G50040 Protein of unknown function (DUF1005) -0.51 0.32 -0.32
76 AT5G65550 UDP-Glycosyltransferase superfamily protein -0.51 0.32 -0.31
77 AT3G49700 1-aminocyclopropane-1-carboxylate synthase 9 1-aminocyclopropane-1-carboxylate
synthase 9, AtACS9, ETHYLENE
OVERPRODUCING 3		 -0.5 0.3 -0.32
78 AT2G30470 high-level expression of sugar-inducible gene 2 high-level expression of
sugar-inducible gene 2,
VP1/ABI3-LIKE 1		 -0.5 0.31 -0.32
79 AT1G04180 YUCCA 9 YUCCA 9 -0.5 0.3 -0.32
80 AT1G72220 RING/U-box superfamily protein -0.49 0.33 -0.32
81 AT4G22280 F-box/RNI-like superfamily protein -0.49 0.34 -0.31
82 AT3G42360 transposable element gene -0.49 0.34 -0.31
83 AT5G49000 Galactose oxidase/kelch repeat superfamily protein -0.49 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
84 C0124 Isonicotinic acid - - - -0.73 0.45 -0.44
85 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		0.54 0.29 -0.32 C0244