AT1G76460 : -
Query Information
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AGICode AT1G76460
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.3 -0.32
2 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 0.79 0.31 -0.3
3 AT5G22850 Eukaryotic aspartyl protease family protein 0.78 0.34 -0.3
4 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.78 0.33 -0.32
5 AT5G64090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Hyccin
(InterPro:IPR018619); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G21050.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.32 -0.32
6 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 -0.74 0.31 -0.32
7 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 0.74 0.29 -0.32
8 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 0.74 0.3 -0.32
9 AT5G05570 transducin family protein / WD-40 repeat family protein 0.73 0.33 -0.32
10 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 -0.73 0.32 -0.3
11 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 0.73 0.31 -0.31
12 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.73 0.33 -0.32
13 AT3G57000 nucleolar essential protein-related -0.72 0.33 -0.31
14 AT5G18640 alpha/beta-Hydrolases superfamily protein 0.72 0.33 -0.35
15 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 0.72 0.32 -0.32
16 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 0.72 0.31 -0.29
17 AT1G50030 target of rapamycin target of rapamycin 0.72 0.31 -0.29
18 AT2G45910 U-box domain-containing protein kinase family protein 0.71 0.31 -0.31
19 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 -0.71 0.33 -0.3
20 AT1G10590 Nucleic acid-binding, OB-fold-like protein -0.71 0.31 -0.31
21 AT2G15530 RING/U-box superfamily protein 0.71 0.32 -0.31
22 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.71 0.32 -0.32
23 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.7 0.32 -0.31
24 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 -0.7 0.32 -0.32
25 AT3G19930 sugar transporter 4 SUGAR TRANSPORTER 4, sugar
transporter 4		 -0.7 0.32 -0.32
26 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.7 0.31 -0.3
27 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.7 0.31 -0.32
28 AT5G03970 F-box associated ubiquitination effector family protein -0.69 0.32 -0.32
29 AT5G02470 Transcription factor DP DPA -0.69 0.32 -0.32
30 AT2G27720 60S acidic ribosomal protein family -0.69 0.33 -0.34
31 AT3G09000 proline-rich family protein 0.69 0.32 -0.31
32 AT3G27400 Pectin lyase-like superfamily protein -0.69 0.31 -0.32
33 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 -0.69 0.31 -0.3
34 AT5G15240 Transmembrane amino acid transporter family protein 0.69 0.31 -0.32
35 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.69 0.32 -0.29
36 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 0.69 0.3 -0.32
37 AT5G41970 Metal-dependent protein hydrolase -0.68 0.34 -0.33
38 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 0.68 0.29 -0.3
39 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 -0.68 0.32 -0.32
40 AT5G01410 Aldolase-type TIM barrel family protein ATPDX1, ARABIDOPSIS THALIANA
PYRIDOXINE BIOSYNTHESIS 1.3, PDX1,
PYRIDOXINE BIOSYNTHESIS 1.3,
REDUCED SUGAR RESPONSE 4		 -0.68 0.32 -0.33
41 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 0.68 0.3 -0.31
42 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 -0.68 0.32 -0.31
43 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 -0.68 0.34 -0.31
44 AT1G08680 ARF GAP-like zinc finger-containing protein ZIGA4 ARF-GAP domain 14, ARF GAP-like
zinc finger-containing protein
ZIGA4		 0.68 0.3 -0.31
45 AT5G18630 alpha/beta-Hydrolases superfamily protein 0.68 0.3 -0.31
46 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 -0.67 0.33 -0.3
47 AT2G44120 Ribosomal protein L30/L7 family protein -0.67 0.31 -0.3
48 AT2G45710 Zinc-binding ribosomal protein family protein -0.67 0.31 -0.31
49 AT3G53950 glyoxal oxidase-related protein 0.67 0.32 -0.31
50 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.67 0.31 -0.32
51 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.67 0.34 -0.32
52 AT4G16265 RNA polymerases M/15 Kd subunit NRPB9B, NRPD9B, NRPE9B -0.67 0.31 -0.31
53 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.32 -0.31
54 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 -0.67 0.34 -0.33
55 AT2G44370 Cysteine/Histidine-rich C1 domain family protein -0.67 0.28 -0.32
56 AT2G26440 Plant invertase/pectin methylesterase inhibitor superfamily -0.67 0.31 -0.3
57 AT2G15900 Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.67 0.32 -0.31
58 AT2G40780 Nucleic acid-binding, OB-fold-like protein -0.67 0.33 -0.33
59 AT3G02300 Regulator of chromosome condensation (RCC1) family protein 0.66 0.34 -0.31
60 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.66 0.32 -0.34
61 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.66 0.3 -0.34
62 AT1G17340 Phosphoinositide phosphatase family protein 0.66 0.32 -0.34
63 AT5G41100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in
220 species: Archae - 4; Bacteria - 108; Metazoa - 481;
Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes -
367 (source: NCBI BLink).		 0.66 0.32 -0.34
64 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 -0.66 0.33 -0.3
65 AT5G24840 tRNA (guanine-N-7) methyltransferase -0.65 0.32 -0.3
66 AT1G78460 SOUL heme-binding family protein -0.65 0.34 -0.31
67 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein 0.65 0.31 -0.32
68 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 0.65 0.3 -0.32
69 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.29 -0.31
70 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 -0.65 0.3 -0.32
71 AT5G65670 indole-3-acetic acid inducible 9 indole-3-acetic acid inducible 9 -0.65 0.33 -0.29
72 AT2G25680 molybdate transporter 1 molybdate transporter 1 -0.65 0.31 -0.33
73 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 0.65 0.33 -0.31
74 AT5G23870 Pectinacetylesterase family protein -0.65 0.33 -0.31
75 AT2G44510 CDK inhibitor P21 binding protein -0.65 0.31 -0.33
76 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 0.64 0.31 -0.3
77 AT1G20370 Pseudouridine synthase family protein -0.64 0.33 -0.31
78 AT5G64060 NAC domain containing protein 103 NAC domain containing protein 103,
NAC domain containing protein 103		 -0.64 0.31 -0.32
79 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.64 0.32 -0.31
80 AT2G20230 Tetraspanin family protein 0.64 0.31 -0.31
81 AT2G42850 cytochrome P450, family 718 cytochrome P450, family 718 -0.64 0.31 -0.31
82 AT5G60790 ABC transporter family protein ATP-binding cassette F1,
ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 1, GENERAL
CONTROL NON-REPRESSIBLE 1		 -0.64 0.32 -0.3
83 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 -0.64 0.31 -0.29
84 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE 0.64 0.33 -0.32
85 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 -0.64 0.31 -0.33
86 AT5G12370 exocyst complex component sec10 exocyst complex component sec10 0.63 0.31 -0.3
87 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.63 0.31 -0.32
88 AT3G27670 ARM repeat superfamily protein RESURRECTION1 0.62 0.33 -0.31
89 AT1G78790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2008
(InterPro:IPR018552); Has 27 Blast hits to 27 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.33 -0.3
90 AT4G34310 alpha/beta-Hydrolases superfamily protein 0.62 0.32 -0.3
91 AT1G17980 poly(A) polymerase 1 poly(A) polymerase 1 0.62 0.32 -0.3
92 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.62 0.32 -0.31
93 AT3G05670 RING/U-box protein 0.62 0.33 -0.33
94 AT5G62850 Nodulin MtN3 family protein AtSWEET5, VEGETATIVE CELL
EXPRESSED1, SWEET5		 0.62 0.31 -0.31
95 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 0.61 0.31 -0.33
96 AT1G67140 HEAT repeat-containing protein SWEETIE 0.61 0.31 -0.3
97 AT3G63180 TIC-like TICKLE, TIC-like 0.61 0.32 -0.31
98 AT5G54680 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 105,
iaa-leucine resistant3		 0.61 0.33 -0.31