AT1G10910 : EMBRYO DEFECTIVE 3103
Query Information
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AGICode AT1G10910
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G10910 Pentatricopeptide repeat (PPR) superfamily protein EMBRYO DEFECTIVE 3103 1 0.32 -0.31
2 AT5G08650 Small GTP-binding protein 0.87 0.31 -0.32
3 AT1G71720 Nucleic acid-binding proteins superfamily PIGMENT DEFECTIVE 338 0.87 0.32 -0.29
4 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.86 0.31 -0.32
5 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.84 0.3 -0.31
6 AT3G04340 FtsH extracellular protease family embryo defective 2458 0.83 0.31 -0.29
7 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.83 0.35 -0.31
8 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 0.82 0.33 -0.32
9 AT1G64430 Pentatricopeptide repeat (PPR) superfamily protein 0.81 0.33 -0.31
10 AT5G19210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.32 -0.31
11 AT3G10840 alpha/beta-Hydrolases superfamily protein 0.8 0.33 -0.33
12 AT3G58830 haloacid dehalogenase (HAD) superfamily protein 0.8 0.32 -0.32
13 AT2G38330 MATE efflux family protein 0.79 0.28 -0.31
14 AT5G10470 kinesin like protein for actin based chloroplast movement 1 kinesin like protein for actin
based chloroplast movement 1,
KINESIN CDKA;1 ASSOCIATED 1		 0.79 0.31 -0.3
15 AT4G26860 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 0.79 0.32 -0.31
16 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.79 0.33 -0.33
17 AT3G26744 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 A. THALIANA INDUCER OF CBP
EXPRESSION 1, INDUCER OF CBF
EXPRESSION 1, SCREAM		 0.78 0.33 -0.31
18 AT1G50000 methyltransferases 0.78 0.3 -0.32
19 AT1G12330 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi -
14; Plants - 217; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.78 0.32 -0.3
20 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 0.78 0.3 -0.3
21 AT3G23070 CRM family member 3A ATCFM3A, CRM family member 3A 0.78 0.28 -0.32
22 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.78 0.31 -0.31
23 ATCG00630 PSAJ PSAJ 0.77 0.32 -0.33
24 AT5G16620 hydroxyproline-rich glycoprotein family protein translocon at the inner envelope
membrane of chloroplasts 40,
pigment defective embryo 120,
translocon at the inner envelope
membrane of chloroplasts 40		 0.77 0.31 -0.3
25 AT5G04710 Zn-dependent exopeptidases superfamily protein 0.77 0.32 -0.32
26 AT3G24560 Adenine nucleotide alpha hydrolases-like superfamily
protein		 RASPBERRY 3 0.76 0.31 -0.31
27 AT2G31530 SecY protein transport family protein EMBRYO DEFECTIVE 2289, SECY
HOMOLOG 2		 0.76 0.31 -0.3
28 AT1G03320 unknown protein; Has 1038 Blast hits to 683 proteins in 112
species: Archae - 4; Bacteria - 14; Metazoa - 318; Fungi -
117; Plants - 86; Viruses - 8; Other Eukaryotes - 491
(source: NCBI BLink).		 0.75 0.32 -0.31
29 AT1G73020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF590 (InterPro:IPR007632); Has 1198
Blast hits to 1128 proteins in 154 species: Archae - 0;
Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25;
Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).		 0.75 0.33 -0.33
30 AT3G48500 Nucleic acid-binding, OB-fold-like protein PIGMENT DEFECTIVE 312, PLASTID
TRANSCRIPTIONALLY ACTIVE 10		 0.75 0.32 -0.31
31 AT2G47220 DOMAIN OF UNKNOWN FUNCTION 724 5 DOMAIN OF UNKNOWN FUNCTION 724 5,
DOMAIN OF UNKNOWN FUNCTION 724 5		 0.74 0.32 -0.33
32 AT4G18290 potassium channel in Arabidopsis thaliana 2 potassium channel in Arabidopsis
thaliana 2		 0.74 0.34 -0.32
33 AT1G50840 polymerase gamma 2 polymerase gamma 2, polymerase I A 0.74 0.34 -0.32
34 AT3G28950 AIG2-like (avirulence induced gene) family protein -0.73 0.31 -0.3
35 AT4G31500 cytochrome P450, family 83, subfamily B, polypeptide 1 ALTERED TRYPTOPHAN REGULATION 4,
cytochrome P450, family 83,
subfamily B, polypeptide 1, RED
ELONGATED 1, RUNT 1, SUPERROOT 2		 -0.72 0.33 -0.31
36 AT4G37870 phosphoenolpyruvate carboxykinase 1 phosphoenolpyruvate carboxykinase
1, PHOSPHOENOLPYRUVATE
CARBOXYKINASE		 -0.72 0.3 -0.34
37 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.71 0.31 -0.32
38 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.69 0.31 -0.31
39 AT3G62580 Late embryogenesis abundant protein (LEA) family protein -0.68 0.32 -0.31
40 AT5G16510 Alpha-1,4-glucan-protein synthase family protein reversibly glycosylated
polypeptide 5, reversibly
glycosylated protein 5		 -0.66 0.31 -0.3
41 AT1G78780 pathogenesis-related family protein -0.66 0.29 -0.3
42 AT2G24200 Cytosol aminopeptidase family protein -0.66 0.33 -0.31
43 AT1G26820 ribonuclease 3 ribonuclease 3 -0.65 0.33 -0.3
44 AT2G44450 beta glucosidase 15 beta glucosidase 15 -0.65 0.29 -0.31
45 AT5G02420 unknown protein; Has 90 Blast hits to 90 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.3 -0.34
46 AT3G20470 glycine-rich protein 5 ATGRP-5, ATGRP5, GLYCINE-RICH
PROTEIN 5, glycine-rich protein 5		 -0.64 0.32 -0.33
47 AT5G02100 Oxysterol-binding family protein OSBP(OXYSTEROL BINDING
PROTEIN)-RELATED PROTEIN 3A,
UNFERTILIZED EMBRYO SAC 18		 -0.63 0.29 -0.33
48 AT1G10070 branched-chain amino acid transaminase 2 branched-chain amino acid
transaminase 2, branched-chain
amino acid transaminase 2		 -0.62 0.3 -0.32
49 AT1G54990 alpha/beta-Hydrolases superfamily protein AUXIN RESISTANT 4, REDUCED ROOT
GRAVITROPISM, REDUCED ROOT
GRAVITROPISM 1		 -0.61 0.28 -0.32
50 AT2G46140 Late embryogenesis abundant protein -0.61 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.86 0.45 -0.45 C0133
52 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.8 0.47 -0.44
53 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		-0.64 0.44 -0.45 C0239