AT2G47270 : UPBEAT1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G47270
Description sequence-specific DNA binding transcription factors;transcription regulators
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 1 0.32 -0.31
2 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 0.83 0.31 -0.31
3 AT5G48560 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.74 0.32 -0.31
4 AT1G05230 homeodomain GLABROUS 2 homeodomain GLABROUS 2 -0.73 0.34 -0.34
5 AT2G20570 GBF's pro-rich region-interacting factor 1 ARABIDOPSIS GOLDEN2-LIKE 1,
GOLDEN2-LIKE 1, GBF's pro-rich
region-interacting factor 1		 -0.73 0.3 -0.29
6 AT1G20900 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 27, ESCAROLA, ORESARA 7		 0.72 0.32 -0.32
7 AT3G03770 Leucine-rich repeat protein kinase family protein -0.71 0.34 -0.3
8 AT5G13910 Integrase-type DNA-binding superfamily protein LEAFY PETIOLE 0.7 0.31 -0.29
9 AT3G14610 cytochrome P450, family 72, subfamily A, polypeptide 7 cytochrome P450, family 72,
subfamily A, polypeptide 7		 0.7 0.32 -0.32
10 AT3G61250 myb domain protein 17 myb domain protein 17, LATE
MERISTEM IDENTITY2, myb domain
protein 17		 -0.7 0.3 -0.31
11 AT1G30160 Protein of unknown function (DUF295) -0.69 0.33 -0.33
12 AT5G45850 Protein of unknown function (DUF688) -0.69 0.29 -0.32
13 AT1G12950 root hair specific 2 root hair specific 2 0.69 0.33 -0.3
14 AT4G13660 pinoresinol reductase 2 ATPRR2, pinoresinol reductase 2 0.69 0.31 -0.34
15 AT2G15740 C2H2-like zinc finger protein -0.69 0.32 -0.31
16 AT2G25980 Mannose-binding lectin superfamily protein 0.68 0.31 -0.32
17 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 0.67 0.32 -0.33
18 AT5G05880 UDP-Glycosyltransferase superfamily protein 0.67 0.33 -0.32
19 AT3G21510 histidine-containing phosphotransmitter 1 histidine-containing
phosphotransmitter 1		 0.66 0.32 -0.32
20 AT3G44960 unknown protein; Has 34 Blast hits to 34 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.34 -0.33
21 AT1G33800 Protein of unknown function (DUF579) 0.65 0.3 -0.31
22 AT2G22190 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
E		 -0.65 0.32 -0.3
23 AT3G49960 Peroxidase superfamily protein 0.65 0.31 -0.31
24 AT1G70370 polygalacturonase 2 polygalacturonase 2 -0.65 0.32 -0.33
25 AT1G73700 MATE efflux family protein -0.64 0.31 -0.32
26 AT3G24450 Heavy metal transport/detoxification superfamily protein 0.64 0.31 -0.33
27 AT1G28610 GDSL-like Lipase/Acylhydrolase superfamily protein -0.64 0.31 -0.32
28 AT1G36060 Integrase-type DNA-binding superfamily protein 0.64 0.31 -0.31
29 AT2G23170 Auxin-responsive GH3 family protein GH3.3 0.64 0.3 -0.33
30 AT1G79450 ALA-interacting subunit 5 ALA-interacting subunit 5 0.64 0.33 -0.31
31 AT3G19230 Leucine-rich repeat (LRR) family protein -0.64 0.32 -0.3
32 AT5G67400 root hair specific 19 root hair specific 19 0.64 0.31 -0.31
33 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits
to 397 proteins in 95 species: Archae - 0; Bacteria - 294;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink).		 -0.64 0.3 -0.3
34 AT2G41970 Protein kinase superfamily protein 0.64 0.29 -0.3
35 AT2G41200 unknown protein; Has 26 Blast hits to 26 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.31 -0.32
36 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 -0.64 0.31 -0.31
37 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 0.63 0.29 -0.32
38 AT3G01140 myb domain protein 106 myb domain protein 106, myb domain
protein 106, NOECK		 -0.63 0.32 -0.31
39 AT4G00490 beta-amylase 2 beta-amylase 2, BETA-AMYLASE 9 -0.63 0.31 -0.33
40 AT5G04960 Plant invertase/pectin methylesterase inhibitor superfamily 0.63 0.32 -0.32
41 AT2G24980 Proline-rich extensin-like family protein extensin 6 0.63 0.3 -0.31
42 AT5G53320 Leucine-rich repeat protein kinase family protein 0.63 0.31 -0.33
43 AT2G45210 SAUR-like auxin-responsive protein family 0.63 0.34 -0.31
44 AT1G16500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits
to 134 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.31
45 AT5G67280 receptor-like kinase receptor-like kinase -0.63 0.31 -0.29
46 AT3G12200 NIMA-related kinase 7 NIMA-related kinase 7,
NIMA-related kinase 7		 -0.63 0.32 -0.29
47 AT3G43190 sucrose synthase 4 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 4, sucrose synthase 4		 0.63 0.33 -0.3
48 AT1G53180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.63 0.33 -0.33
49 AT5G39220 alpha/beta-Hydrolases superfamily protein -0.62 0.29 -0.3
50 AT1G33330 Class I peptide chain release factor -0.62 0.32 -0.32
51 AT3G10710 root hair specific 12 root hair specific 12 0.62 0.31 -0.3
52 AT3G08770 lipid transfer protein 6 lipid transfer protein 6 -0.62 0.32 -0.32
53 AT5G65140 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
J		 0.62 0.32 -0.32
54 AT5G66985 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.31 -0.32
55 AT3G62680 proline-rich protein 3 ARABIDOPSIS THALIANA PROLINE-RICH
PROTEIN 3, proline-rich protein 3		 0.61 0.3 -0.3
56 AT1G20640 Plant regulator RWP-RK family protein -0.61 0.32 -0.33
57 AT1G55550 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.31 -0.32
58 AT5G62130 Per1-like family protein -0.61 0.32 -0.33
59 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 0.61 0.35 -0.29
60 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 0.6 0.3 -0.29
61 AT5G35190 proline-rich extensin-like family protein extensin 13 0.6 0.3 -0.32
62 AT2G44930 Plant protein of unknown function (DUF247) -0.6 0.32 -0.28
63 AT1G60680 NAD(P)-linked oxidoreductase superfamily protein 0.6 0.31 -0.3
64 AT1G80100 histidine phosphotransfer protein 6 histidine phosphotransfer protein
6, histidine phosphotransfer
protein 6		 0.6 0.32 -0.3
65 AT5G05500 Pollen Ole e 1 allergen and extensin family protein MOP10 0.6 0.3 -0.3
66 AT3G12460 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.6 0.31 -0.32
67 AT4G14210 phytoene desaturase 3 PIGMENT DEFECTIVE 226, PHYTOENE
DESATURASE, phytoene desaturase 3		 -0.6 0.31 -0.33
68 AT2G23030 SNF1-related protein kinase 2.9 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-9, SNF1-related
protein kinase 2.9		 0.6 0.3 -0.32
69 AT1G53460 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF
zinc finger-like superfamily protein (TAIR:AT1G70650.2);
Has 485 Blast hits to 413 proteins in 88 species: Archae -
11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101;
Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink).		 0.59 0.32 -0.31
70 AT5G57655 xylose isomerase family protein 0.59 0.32 -0.29
71 AT1G26600 CLAVATA3/ESR-RELATED 9 CLAVATA3/ESR-RELATED 9 -0.59 0.32 -0.33
72 AT3G44630 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.31 -0.33
73 AT1G12750 RHOMBOID-like protein 6 RHOMBOID-like protein 6,
RHOMBOID-like protein 6		 -0.59 0.32 -0.3
74 AT1G67330 Protein of unknown function (DUF579) 0.59 0.33 -0.31
75 AT5G50260 Cysteine proteinases superfamily protein cysteine endopeptidase 1 0.59 0.33 -0.31
76 AT5G67350 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.59 0.33 -0.31
77 AT5G54510 Auxin-responsive GH3 family protein DWARF IN LIGHT 1, GH3.6 0.58 0.31 -0.32
78 AT3G02830 zinc finger protein 1 zinc finger protein 1 -0.58 0.32 -0.34
79 AT1G62960 ACC synthase 10 ACC synthase 10 -0.58 0.34 -0.3
80 AT2G07020 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.58 0.35 -0.32
81 AT2G34960 cationic amino acid transporter 5 cationic amino acid transporter 5 -0.58 0.33 -0.33
82 AT1G78010 tRNA modification GTPase, putative -0.58 0.33 -0.3
83 AT1G53340 Cysteine/Histidine-rich C1 domain family protein 0.58 0.3 -0.31
84 AT1G51670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48180.1); Has 37 Blast hits
to 37 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.3 -0.32
85 AT2G21850 Cysteine/Histidine-rich C1 domain family protein 0.57 0.31 -0.32
86 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.57 0.3 -0.32
87 AT2G17470 Aluminium activated malate transporter family protein ALuminium activated Malate
Transporter 6, AtALMT6		 -0.57 0.31 -0.31
88 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein -0.57 0.31 -0.32
89 AT4G00680 actin depolymerizing factor 8 actin depolymerizing factor 8 0.57 0.33 -0.32
90 AT2G05640 transposable element gene -0.57 0.31 -0.3
91 AT1G75540 salt tolerance homolog2 B BOX 21, B-box domain protein 21,
long hypocotyl under shade, salt
tolerance homolog2		 0.57 0.31 -0.32
92 AT4G21760 beta-glucosidase 47 beta-glucosidase 47 -0.57 0.32 -0.33
93 AT5G62070 IQ-domain 23 IQ-domain 23 -0.57 0.31 -0.33
94 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.57 0.33 -0.32
95 AT3G16680 DNA binding;DNA-directed RNA polymerases -0.57 0.31 -0.31
96 AT5G14880 Potassium transporter family protein -0.56 0.31 -0.32
97 AT5G65640 beta HLH protein 93 beta HLH protein 93 0.56 0.33 -0.3
98 AT5G47370 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein HAT2 0.56 0.31 -0.31
99 AT3G11000 DCD (Development and Cell Death) domain protein -0.56 0.33 -0.3
100 AT5G62230 ERECTA-like 1 ERECTA-like 1 -0.56 0.31 -0.3
101 AT3G16280 Integrase-type DNA-binding superfamily protein -0.56 0.31 -0.32
102 AT4G11650 osmotin 34 osmotin 34, osmotin 34 0.56 0.31 -0.3
103 AT5G40300 Uncharacterised protein family (UPF0497) 0.56 0.34 -0.32
104 AT1G33430 Galactosyltransferase family protein -0.56 0.33 -0.32
105 AT1G19010 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74860.1); Has 337 Blast hits
to 320 proteins in 97 species: Archae - 0; Bacteria - 14;
Metazoa - 153; Fungi - 26; Plants - 76; Viruses - 0; Other
Eukaryotes - 68 (source: NCBI BLink).		 -0.56 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0204 Phosphatidylglycerol-34:2 - Phosphatidylglycerol-34:2 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.82 0.47 -0.46 C0204
107 C0025 2-Hydroxy-3-butenylglucosinolate (R),(S)-2-Hydroxy-3-butenylglucosinolate 2-hydroxy-3-butenylglucosinolate glucosinolate biosynthesis from dihomomethionine 0.59 0.43 -0.44 C0025