AT1G04860 : ATUBP2
Query Information
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AGICode AT1G04860
Description ubiquitin-specific protease 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G04860 ubiquitin-specific protease 2 ATUBP2, ubiquitin-specific
protease 2		 1 0.34 -0.29
2 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.81 0.31 -0.31
3 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.8 0.32 -0.32
4 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 0.77 0.33 -0.31
5 AT2G41960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast
hits to 7260 proteins in 458 species: Archae - 17; Bacteria
- 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses
- 38; Other Eukaryotes - 4487 (source: NCBI BLink).		 0.74 0.32 -0.29
6 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 0.73 0.32 -0.31
7 AT1G28060 Pre-mRNA-splicing factor 3 0.72 0.32 -0.3
8 AT2G25970 KH domain-containing protein 0.72 0.31 -0.3
9 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.31 -0.31
10 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.3 -0.31
11 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 0.71 0.29 -0.31
12 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.71 0.33 -0.31
13 AT1G22730 MA3 domain-containing protein 0.71 0.3 -0.32
14 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.7 0.28 -0.32
15 AT5G10630 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.68 0.32 -0.3
16 AT5G41260 Protein kinase protein with tetratricopeptide repeat domain 0.68 0.3 -0.3
17 AT1G06530 Tropomyosin-related peroxisomal and mitochondrial
division factor 2		 0.67 0.31 -0.31
18 AT2G42520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.34 -0.29
19 AT3G57890 Tubulin binding cofactor C domain-containing protein 0.67 0.33 -0.31
20 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 -0.67 0.32 -0.31
21 AT2G42390 protein kinase C substrate, heavy chain-related -0.66 0.31 -0.34
22 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.3 -0.3
23 AT5G42950 GYF domain-containing protein 0.66 0.31 -0.29
24 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 0.66 0.31 -0.33
25 AT3G25890 Integrase-type DNA-binding superfamily protein cytokinin response factor 11 0.65 0.3 -0.29
26 AT5G49500 Signal recognition particle, SRP54 subunit protein -0.65 0.31 -0.31
27 AT4G21170 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.29 -0.3
28 AT5G58130 RNA-binding (RRM/RBD/RNP motifs) family protein REPRESSOR OF SILENCING 3 0.65 0.33 -0.33
29 AT4G18520 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.31 -0.32
30 AT3G12670 CTP synthase family protein embryo defective 2742 0.65 0.32 -0.31
31 AT5G64270 splicing factor, putative 0.65 0.31 -0.33
32 AT2G36360 Galactose oxidase/kelch repeat superfamily protein -0.64 0.33 -0.31
33 AT3G16990 Haem oxygenase-like, multi-helical -0.64 0.32 -0.29
34 AT1G55930 CBS domain-containing protein / transporter associated
domain-containing protein		 0.64 0.3 -0.3
35 AT3G09650 Tetratricopeptide repeat (TPR)-like superfamily protein CRM3, HIGH CHLOROPHYLL
FLUORESCENCE 152		 0.64 0.3 -0.33
36 AT5G44280 RING 1A ARABIDOPSIS THALIANA RING 1A, RING
1A		 0.64 0.32 -0.32
37 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein 0.63 0.33 -0.32
38 AT1G16610 arginine/serine-rich 45 RNPS1, arginine/serine-rich 45 0.63 0.31 -0.31
39 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.63 0.3 -0.32
40 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.63 0.33 -0.32
41 AT4G31880 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Tudor/PWWP/MBT
superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast
hits to 70781 proteins in 2973 species: Archae - 289;
Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants -
6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink).		 0.63 0.29 -0.31
42 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 0.62 0.31 -0.32
43 AT3G04820 Pseudouridine synthase family protein 0.62 0.3 -0.32
44 AT2G39090 tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex 7,
AtAPC7		 -0.62 0.33 -0.31
45 AT5G42370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.6 0.32 -0.29
46 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4		 -0.59 0.32 -0.34
47 AT2G36040 transposable element gene -0.58 0.32 -0.3
48 AT4G19670 RING/U-box superfamily protein -0.58 0.31 -0.29
49 AT5G40020 Pathogenesis-related thaumatin superfamily protein -0.57 0.32 -0.32
50 AT2G05820 transposable element gene -0.53 0.32 -0.31
51 AT4G23660 polyprenyltransferase 1 polyprenyltransferase 1,
polyprenyltransferase 1		 -0.52 0.34 -0.34
52 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 -0.52 0.32 -0.33
53 AT3G19400 Cysteine proteinases superfamily protein -0.51 0.3 -0.34
54 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 -0.51 0.31 -0.34
55 AT1G67640 Transmembrane amino acid transporter family protein -0.5 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
56 C0215 PR_MST_2527.1 - - - 0.75 0.43 -0.41
57 C0213 PR_MST_2410.2 - - - 0.65 0.43 -0.42