AT1G04770 : -
Query Information
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AGICode AT1G04770
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.31 -0.32
2 AT1G36370 serine hydroxymethyltransferase 7 serine hydroxymethyltransferase 7 0.82 0.32 -0.31
3 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 0.79 0.3 -0.33
4 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 0.79 0.3 -0.29
5 AT4G32720 La protein 1 La protein 1, La protein 1 -0.79 0.33 -0.31
6 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 -0.77 0.29 -0.3
7 AT3G12520 sulfate transporter 4;2 sulfate transporter 4;2 0.77 0.31 -0.32
8 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.31 -0.31
9 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.76 0.32 -0.33
10 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 -0.76 0.32 -0.32
11 AT5G23880 cleavage and polyadenylation specificity factor 100 CLEAVAGE AND POLYADENYLATION
SPECIFICITY FACTOR 100, cleavage
and polyadenylation specificity
factor 100, EMBRYO DEFECTIVE 1265,
ENHANCED SILENCING PHENOTYPE 5		 -0.75 0.33 -0.31
12 AT1G52980 GTP-binding family protein nuclear/nucleolar GTPase 2,
nuclear/nucleolar GTPase 2		 -0.75 0.33 -0.3
13 AT2G44460 beta glucosidase 28 beta glucosidase 28 0.75 0.32 -0.32
14 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 -0.75 0.34 -0.32
15 AT5G01200 Duplicated homeodomain-like superfamily protein 0.74 0.34 -0.3
16 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 0.74 0.3 -0.31
17 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 0.74 0.3 -0.33
18 AT1G50920 Nucleolar GTP-binding protein -0.74 0.31 -0.3
19 AT3G21540 transducin family protein / WD-40 repeat family protein -0.74 0.35 -0.29
20 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 -0.74 0.3 -0.31
21 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 -0.73 0.32 -0.32
22 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 -0.73 0.3 -0.33
23 AT1G80750 Ribosomal protein L30/L7 family protein -0.73 0.28 -0.31
24 AT3G57000 nucleolar essential protein-related -0.73 0.32 -0.3
25 AT1G24510 TCP-1/cpn60 chaperonin family protein -0.73 0.31 -0.32
26 AT5G16070 TCP-1/cpn60 chaperonin family protein -0.73 0.33 -0.33
27 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.73 0.31 -0.33
28 AT1G25350 glutamine-tRNA ligase, putative / glutaminyl-tRNA
synthetase, putative / GlnRS, putative		 ovule abortion 9 -0.73 0.32 -0.31
29 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 -0.73 0.33 -0.32
30 AT5G20890 TCP-1/cpn60 chaperonin family protein -0.73 0.33 -0.34
31 AT3G22660 rRNA processing protein-related -0.73 0.31 -0.29
32 AT4G20820 FAD-binding Berberine family protein 0.73 0.31 -0.31
33 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 -0.72 0.32 -0.32
34 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 -0.72 0.32 -0.32
35 AT3G51270 protein serine/threonine kinases;ATP binding;catalytics -0.72 0.33 -0.36
36 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE -0.72 0.31 -0.33
37 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 -0.71 0.31 -0.3
38 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family
protein		 -0.71 0.31 -0.31
39 AT3G05400 Major facilitator superfamily protein 0.71 0.31 -0.32
40 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 -0.71 0.32 -0.32
41 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.71 0.32 -0.31
42 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.71 0.32 -0.36
43 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.3 -0.29
44 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 -0.71 0.32 -0.31
45 AT1G52930 Ribosomal RNA processing Brix domain protein -0.71 0.32 -0.31
46 AT3G12270 protein arginine methyltransferase 3 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 3,
protein arginine methyltransferase
3		 -0.71 0.31 -0.33
47 AT1G25260 Ribosomal protein L10 family protein -0.71 0.3 -0.31
48 AT5G52820 WD-40 repeat family protein / notchless protein, putative -0.71 0.31 -0.32
49 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.71 0.32 -0.31
50 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 -0.71 0.31 -0.34
51 AT5G17440 LUC7 related protein -0.71 0.32 -0.31
52 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 0.71 0.32 -0.33
53 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.71 0.3 -0.32
54 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 -0.71 0.33 -0.33
55 AT5G11240 transducin family protein / WD-40 repeat family protein -0.71 0.32 -0.33
56 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.31 -0.32
57 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 -0.7 0.31 -0.31
58 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 -0.7 0.33 -0.31
59 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 0.7 0.31 -0.32
60 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 -0.7 0.3 -0.32
61 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 -0.7 0.33 -0.3
62 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 -0.7 0.31 -0.31
63 AT2G36290 alpha/beta-Hydrolases superfamily protein -0.7 0.31 -0.32
64 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 -0.7 0.29 -0.3
65 AT2G40660 Nucleic acid-binding, OB-fold-like protein -0.7 0.31 -0.31
66 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein -0.7 0.31 -0.32
67 AT5G62440 Protein of unknown function (DUF3223) -0.7 0.32 -0.31
68 AT3G13230 RNA-binding KH domain-containing protein -0.7 0.31 -0.3
69 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 -0.69 0.3 -0.31
70 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.31 -0.33
71 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 -0.69 0.31 -0.32
72 AT3G02760 Class II aaRS and biotin synthetases superfamily protein -0.69 0.3 -0.3
73 AT3G23620 Ribosomal RNA processing Brix domain protein -0.69 0.32 -0.31
74 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 0.69 0.32 -0.27
75 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 0.69 0.3 -0.32
76 AT4G17250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits
to 31 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.31 -0.33
77 AT3G58510 DEA(D/H)-box RNA helicase family protein -0.69 0.32 -0.32
78 AT2G18670 RING/U-box superfamily protein 0.69 0.3 -0.32
79 AT1G04080 Tetratricopeptide repeat (TPR)-like superfamily protein PRP39 -0.69 0.33 -0.3
80 AT2G47790 Transducin/WD40 repeat-like superfamily protein -0.69 0.31 -0.34
81 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.69 0.3 -0.33
82 AT1G13030 sphere organelles protein-related -0.69 0.34 -0.32
83 AT4G25340 FK506 BINDING PROTEIN 53 ATFKBP53, FK506 BINDING PROTEIN 53 -0.69 0.31 -0.3
84 AT1G12270 stress-inducible protein, putative Hop1 -0.69 0.31 -0.31
85 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.31 -0.32
86 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 -0.68 0.33 -0.33
87 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 -0.68 0.31 -0.31
88 AT1G13160 ARM repeat superfamily protein -0.68 0.32 -0.32
89 AT1G06380 Ribosomal protein L1p/L10e family -0.68 0.32 -0.3
90 AT4G07410 Transducin family protein / WD-40 repeat family protein POPCORN -0.68 0.32 -0.33
91 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 -0.68 0.31 -0.28
92 AT5G28740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.33 -0.31
93 AT4G38710 glycine-rich protein -0.68 0.32 -0.32
94 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 0.68 0.31 -0.32
95 AT5G22320 Leucine-rich repeat (LRR) family protein -0.68 0.32 -0.29
96 AT1G06670 nuclear DEIH-boxhelicase nuclear DEIH-boxhelicase -0.68 0.32 -0.31
97 AT2G19740 Ribosomal protein L31e family protein -0.68 0.32 -0.31
98 AT2G03670 cell division cycle 48B cell division cycle 48B -0.67 0.31 -0.31
99 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 -0.67 0.31 -0.31
100 AT1G07230 non-specific phospholipase C1 non-specific phospholipase C1 0.67 0.33 -0.34
101 AT3G10530 Transducin/WD40 repeat-like superfamily protein -0.67 0.32 -0.33
102 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 -0.67 0.32 -0.31
103 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 -0.67 0.32 -0.29
104 AT3G26850 histone-lysine N-methyltransferases -0.67 0.29 -0.3
105 AT1G72320 pumilio 23 pumilio 23, pumilio 23 -0.67 0.31 -0.31
106 AT3G62940 Cysteine proteinases superfamily protein -0.67 0.3 -0.32
107 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 -0.67 0.33 -0.3
108 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.67 0.31 -0.29
109 AT2G20960 Arabidopsis phospholipase-like protein (PEARLI 4) family pEARLI4 0.67 0.31 -0.32
110 AT4G02400 U3 ribonucleoprotein (Utp) family protein -0.67 0.3 -0.31
111 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 -0.67 0.3 -0.35
112 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.67 0.31 -0.32
113 AT3G45140 lipoxygenase 2 ARABIODOPSIS THALIANA LIPOXYGENASE
2, lipoxygenase 2		 0.66 0.34 -0.32
114 AT5G26220 ChaC-like family protein 0.66 0.31 -0.31
115 AT5G24660 response to low sulfur 2 RESPONSE TO LOW SULFUR 2 0.66 0.32 -0.31
116 AT5G13880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G47920.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.31 -0.3
117 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 0.66 0.32 -0.3
118 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 0.66 0.32 -0.32
119 AT4G39190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits
to 3562 proteins in 401 species: Archae - 12; Bacteria -
497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses -
22; Other Eukaryotes - 3119 (source: NCBI BLink).		 0.66 0.32 -0.33
120 AT5G42800 dihydroflavonol 4-reductase dihydroflavonol 4-reductase, M318,
TT3		 0.65 0.31 -0.32
121 AT1G12030 Protein of unknown function (DUF506) 0.65 0.32 -0.32
122 AT5G37670 HSP20-like chaperones superfamily protein 0.65 0.32 -0.31
123 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 0.65 0.32 -0.33
124 AT1G10150 Carbohydrate-binding protein 0.64 0.32 -0.31
125 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.33 -0.31
126 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 0.64 0.34 -0.31
127 AT2G05590 TLD-domain containing nucleolar protein 0.62 0.31 -0.32
128 AT2G30540 Thioredoxin superfamily protein 0.62 0.34 -0.33
129 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 0.61 0.32 -0.32
130 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.61 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
131 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.71 0.46 -0.46 C0010
132 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		-0.68 0.48 -0.45 C0239