AT1G12800 : -
Query Information
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AGICode AT1G12800
Description Nucleic acid-binding, OB-fold-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G12800 Nucleic acid-binding, OB-fold-like protein 1 0.31 -0.35
2 AT4G17740 Peptidase S41 family protein 0.94 0.31 -0.3
3 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.93 0.32 -0.32
4 AT1G71720 Nucleic acid-binding proteins superfamily PIGMENT DEFECTIVE 338 0.93 0.32 -0.3
5 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.92 0.31 -0.32
6 AT3G13180 NOL1/NOP2/sun family protein / antitermination NusB
domain-containing protein		 0.92 0.34 -0.3
7 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.92 0.32 -0.32
8 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein 0.92 0.3 -0.3
9 AT1G50450 Saccharopine dehydrogenase 0.92 0.31 -0.3
10 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.92 0.33 -0.32
11 AT1G14030 Rubisco methyltransferase family protein 0.92 0.3 -0.32
12 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.91 0.33 -0.32
13 AT3G60750 Transketolase 0.91 0.33 -0.32
14 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.91 0.31 -0.31
15 AT4G15110 cytochrome P450, family 97, subfamily B, polypeptide 3 cytochrome P450, family 97,
subfamily B, polypeptide 3		 0.91 0.31 -0.32
16 AT5G05740 ethylene-dependent gravitropism-deficient and
yellow-green-like 2		 ATEGY2, ethylene-dependent
gravitropism-deficient and
yellow-green-like 2		 0.91 0.32 -0.31
17 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2,
embryo defective 1629		 0.91 0.31 -0.31
18 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits
to 146 proteins in 26 species: Archae - 0; Bacteria - 6;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.91 0.31 -0.33
19 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.91 0.31 -0.31
20 AT5G08650 Small GTP-binding protein 0.91 0.31 -0.31
21 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.31 -0.31
22 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.9 0.33 -0.32
23 AT5G10690 pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein		 0.9 0.33 -0.32
24 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.9 0.3 -0.32
25 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.32 -0.31
26 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.9 0.3 -0.32
27 AT1G62750 Translation elongation factor EFG/EF2 protein SNOWY COTYLEDON 1, ATSCO1/CPEF-G,
SNOWY COTYLEDON 1		 0.9 0.32 -0.34
28 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.9 0.31 -0.32
29 AT1G11860 Glycine cleavage T-protein family 0.9 0.31 -0.34
30 AT2G18710 SECY homolog 1 SECY homolog 1 0.9 0.33 -0.32
31 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.9 0.29 -0.3
32 AT5G46420 16S rRNA processing protein RimM family 0.9 0.3 -0.32
33 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.89 0.32 -0.33
34 AT3G51820 UbiA prenyltransferase family protein ATG4, CHLG, G4, PIGMENT DEFECTIVE
325		 0.89 0.3 -0.32
35 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.89 0.33 -0.32
36 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.89 0.31 -0.33
37 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.89 0.31 -0.34
38 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.89 0.32 -0.31
39 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.89 0.33 -0.33
40 AT2G24060 Translation initiation factor 3 protein 0.89 0.3 -0.31
41 AT1G80030 Molecular chaperone Hsp40/DnaJ family protein 0.89 0.31 -0.33
42 AT1G49380 cytochrome c biogenesis protein family 0.89 0.32 -0.34
43 AT1G29070 Ribosomal protein L34 0.89 0.33 -0.33
44 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.89 0.33 -0.31
45 AT3G04340 FtsH extracellular protease family embryo defective 2458 0.88 0.31 -0.31
46 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.88 0.32 -0.3
47 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.88 0.33 -0.32
48 AT5G36170 high chlorophyll fluorescent 109 ATPRFB, high chlorophyll
fluorescent 109		 0.88 0.3 -0.29
49 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.88 0.28 -0.33
50 AT1G26230 TCP-1/cpn60 chaperonin family protein chaperonin-60beta4 0.88 0.33 -0.32
51 AT3G25660 Amidase family protein 0.88 0.31 -0.33
52 AT3G24430 ATP binding HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.88 0.32 -0.31
53 AT3G53130 Cytochrome P450 superfamily protein CYTOCHROME P450 97C1, LUTEIN
DEFICIENT 1		 0.88 0.32 -0.29
54 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.88 0.34 -0.3
55 AT4G04350 tRNA synthetase class I (I, L, M and V) family protein EMBRYO DEFECTIVE 2369 0.88 0.33 -0.32
56 AT3G56940 dicarboxylate diiron protein, putative (Crd1) ACSF, CHL27, COPPER RESPONSE
DEFECT 1		 0.88 0.31 -0.34
57 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.88 0.34 -0.3
58 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.88 0.31 -0.32
59 AT1G60990 Glycine cleavage T-protein family 0.88 0.32 -0.29
60 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.88 0.31 -0.32
61 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.88 0.31 -0.31
62 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.88 0.33 -0.3
63 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.87 0.32 -0.3
64 AT3G10160 DHFS-FPGS homolog C A. THALIANA DHFS-FPGS HOMOLOG C,
DHFS-FPGS homolog C,
folylpolyglutamate synthetase 2		 0.87 0.31 -0.32
65 AT3G10840 alpha/beta-Hydrolases superfamily protein 0.87 0.3 -0.32
66 AT2G04270 RNAse E/G-like RNAse E/G-like 0.87 0.32 -0.32
67 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.87 0.31 -0.32
68 AT4G19100 Protein of unknown function (DUF3464) photosynthesis affected mutant 68 0.87 0.34 -0.32
69 AT1G60600 UbiA prenyltransferase family protein ABERRANT CHLOROPLAST DEVELOPMENT 4 0.87 0.31 -0.32
70 AT3G51870 Mitochondrial substrate carrier family protein 0.87 0.34 -0.3
71 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit glyceraldehyde-3-phosphate
dehydrogenase B subunit		 0.87 0.3 -0.33
72 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.87 0.31 -0.32
73 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.87 0.31 -0.31
74 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.87 0.31 -0.33
75 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.87 0.3 -0.3
76 AT5G63050 embryo defective 2759 embryo defective 2759 0.87 0.33 -0.31
77 AT3G63140 chloroplast stem-loop binding protein of 41 kDa chloroplast stem-loop binding
protein of 41 kDa		 0.87 0.32 -0.3
78 AT3G17040 high chlorophyll fluorescent 107 high chlorophyll fluorescent 107 0.87 0.32 -0.32
79 AT5G52100 Dihydrodipicolinate reductase, bacterial/plant chlororespiration reduction 1 0.87 0.31 -0.31
80 AT4G34090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.87 0.33 -0.32
81 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.87 0.31 -0.34
82 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.86 0.32 -0.33
83 AT2G45270 glycoprotease 1 glycoprotease 1 0.86 0.35 -0.33
84 AT3G03710 polyribonucleotide nucleotidyltransferase, putative PIGMENT DEFECTIVE 326,
POLYNUCLEOTIDE PHOSPHORYLASE,
resistant to inhibition with FSM
10		 0.86 0.32 -0.33
85 AT1G36390 Co-chaperone GrpE family protein 0.86 0.31 -0.3
86 AT5G66470 RNA binding;GTP binding 0.86 0.3 -0.32
87 AT5G62840 Phosphoglycerate mutase family protein 0.86 0.31 -0.31
88 AT3G55330 PsbP-like protein 1 PsbP-like protein 1 0.86 0.29 -0.31
89 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.86 0.34 -0.31
90 AT1G44575 Chlorophyll A-B binding family protein CP22, NONPHOTOCHEMICAL QUENCHING
4, PHOTOSYSTEM II SUBUNIT S		 0.86 0.33 -0.3
91 AT1G32080 membrane protein, putative AtLrgB, LrgB 0.86 0.33 -0.31
92 AT1G12860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 INDUCER OF CBF EXPRESSION 2,
SCREAM 2		 0.86 0.3 -0.33
93 AT5G39210 chlororespiratory reduction 7 CHLORORESPIRATORY REDUCTION 7 0.86 0.32 -0.3
94 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.86 0.32 -0.3
95 AT1G20870 HSP20-like chaperones superfamily protein 0.86 0.3 -0.32
96 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.86 0.32 -0.31
97 AT4G21750 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 MERISTEM LAYER 1 0.86 0.31 -0.31
98 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.86 0.3 -0.32
99 AT5G61410 D-ribulose-5-phosphate-3-epimerase EMBRYO DEFECTIVE 2728,
D-ribulose-5-phosphate-3-epimerase		 0.86 0.31 -0.33
100 AT3G13310 Chaperone DnaJ-domain superfamily protein -0.81 0.34 -0.34
101 AT4G23885 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.81 0.32 -0.32
102 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.8 0.32 -0.31
103 AT5G10820 Major facilitator superfamily protein -0.79 0.31 -0.3
104 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 -0.78 0.3 -0.28
105 AT5G06750 Protein phosphatase 2C family protein -0.78 0.3 -0.29
106 AT3G28850 Glutaredoxin family protein -0.77 0.31 -0.31
107 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.77 0.3 -0.32
108 AT4G19880 Glutathione S-transferase family protein -0.76 0.32 -0.32
109 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 -0.75 0.33 -0.32
110 AT1G32170 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan
endotransglucosylase/hydrolase 30,
xyloglucan endotransglycosylase 4		 -0.75 0.35 -0.3
111 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.75 0.32 -0.32
112 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 -0.74 0.33 -0.31
113 AT3G61980 serine protease inhibitor, Kazal-type family protein -0.73 0.32 -0.31
114 AT1G30040 gibberellin 2-oxidase gibberellin 2-oxidase, gibberellin
2-oxidase, GIBBERELLIN 2-OXIDASE 2		 -0.73 0.31 -0.33
115 AT5G54500 flavodoxin-like quinone reductase 1 flavodoxin-like quinone reductase
1		 -0.73 0.32 -0.3
116 AT3G50260 cooperatively regulated by ethylene and jasmonate 1 ATERF#011, cooperatively regulated
by ethylene and jasmonate 1, DREB
AND EAR MOTIF PROTEIN 1		 -0.72 0.32 -0.3
117 AT2G01650 plant UBX domain-containing protein 2 plant UBX domain-containing
protein 2		 -0.71 0.31 -0.31
118 AT1G35140 Phosphate-responsive 1 family protein EXORDIUM like 1, PHOSPHATE-INDUCED
1		 -0.71 0.31 -0.3
119 AT1G16670 Protein kinase superfamily protein -0.7 0.32 -0.33
120 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.7 0.34 -0.31
121 AT1G25280 tubby like protein 10 tubby like protein 10, tubby like
protein 10		 -0.7 0.32 -0.31
122 AT2G36330 Uncharacterised protein family (UPF0497) -0.7 0.31 -0.31
123 AT1G01730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 42 Blast hits to 42 proteins
in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi
- 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.69 0.32 -0.33
124 AT1G71190 senescence associated gene 18 senescence associated gene 18 -0.69 0.33 -0.34
125 AT5G67310 cytochrome P450, family 81, subfamily G, polypeptide 1 cytochrome P450, family 81,
subfamily G, polypeptide 1		 -0.69 0.29 -0.33
126 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.69 0.31 -0.3
127 AT2G47520 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana ethylene
response factor 71, ethylene
response factor 71, HYPOXIA
RESPONSIVE ERF (ETHYLENE RESPONSE
FACTOR) 2		 -0.69 0.3 -0.32
128 AT5G14180 Myzus persicae-induced lipase 1 Myzus persicae-induced lipase 1 -0.69 0.3 -0.31
129 AT4G37870 phosphoenolpyruvate carboxykinase 1 phosphoenolpyruvate carboxykinase
1, PHOSPHOENOLPYRUVATE
CARBOXYKINASE		 -0.69 0.32 -0.3
130 AT1G74590 glutathione S-transferase TAU 10 GLUTATHIONE S-TRANSFERASE TAU 10,
glutathione S-transferase TAU 10		 -0.69 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
131 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.91 0.44 -0.46 C0133