AT1G53160 : squamosa promoter binding protein-like 4
Query Information
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AGICode AT1G53160
Description squamosa promoter binding protein-like 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G53160 squamosa promoter binding protein-like 4 squamosa promoter binding
protein-like 4		 1 0.31 -0.32
2 AT4G37550 Acetamidase/Formamidase family protein 0.79 0.3 -0.3
3 AT2G27020 20S proteasome alpha subunit G1 20S proteasome alpha subunit G1 -0.78 0.31 -0.33
4 AT1G22300 general regulatory factor 10 14-3-3 PROTEIN G-BOX FACTOR14
EPSILON, GF14 EPSILON, general
regulatory factor 10		 -0.77 0.3 -0.32
5 AT2G34630 geranyl diphosphate synthase 1 GERANYLPYROPHOSPHATE SYNTHASE,
geranyl diphosphate synthase 1		 -0.77 0.32 -0.32
6 AT5G15090 voltage dependent anion channel 3 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 3, voltage
dependent anion channel 3		 -0.76 0.3 -0.32
7 AT5G58290 regulatory particle triple-A ATPase 3 regulatory particle triple-A
ATPase 3		 -0.76 0.33 -0.33
8 AT5G47200 RAB GTPase homolog 1A RAB GTPase homolog 1A, ARABIDOPSIS
RAB GTPASE HOMOLOG D2B, RAB GTPase
homolog 1A		 -0.76 0.31 -0.31
9 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 -0.76 0.31 -0.31
10 AT5G42790 proteasome alpha subunit F1 ARSENIC TOLERANCE 5, ATPSM30,
proteasome alpha subunit F1		 -0.75 0.3 -0.31
11 AT4G12590 Protein of unknown function DUF106, transmembrane -0.74 0.32 -0.31
12 AT5G42150 Glutathione S-transferase family protein -0.73 0.31 -0.31
13 AT3G09810 isocitrate dehydrogenase VI isocitrate dehydrogenase VI -0.73 0.32 -0.33
14 AT3G01280 voltage dependent anion channel 1 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 1, voltage
dependent anion channel 1		 -0.73 0.32 -0.3
15 AT3G11780 MD-2-related lipid recognition domain-containing protein /
ML domain-containing protein		 -0.72 0.31 -0.34
16 AT1G24180 Thiamin diphosphate-binding fold (THDP-binding) superfamily
protein		 IAA-CONJUGATE-RESISTANT 4 -0.72 0.29 -0.33
17 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 -0.72 0.33 -0.32
18 AT3G46540 ENTH/VHS family protein 0.72 0.33 -0.33
19 AT2G47470 thioredoxin family protein ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 11, PDI-LIKE
2-1, MATERNAL EFFECT EMBRYO ARREST
30, PROTEIN DISULFIDE ISOMERASE
11, UNFERTILIZED EMBRYO SAC 5		 -0.72 0.32 -0.31
20 AT3G60820 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBF1 -0.72 0.28 -0.31
21 AT4G02930 GTP binding Elongation factor Tu family protein -0.72 0.3 -0.31
22 AT4G39690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial
inner membrane protein Mitofilin (InterPro:IPR019133); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.71 0.31 -0.34
23 AT5G23540 Mov34/MPN/PAD-1 family protein -0.71 0.31 -0.31
24 AT5G17600 RING/U-box superfamily protein 0.71 0.32 -0.33
25 AT5G56350 Pyruvate kinase family protein -0.7 0.33 -0.3
26 AT5G40580 20S proteasome beta subunit PBB2 20S proteasome beta subunit PBB2 -0.7 0.31 -0.29
27 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.7 0.32 -0.32
28 AT1G18630 glycine-rich RNA-binding protein 6 glycine-rich RNA-binding protein 6 -0.69 0.32 -0.33
29 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.69 0.32 -0.32
30 AT5G61240 Leucine-rich repeat (LRR) family protein -0.69 0.32 -0.32
31 AT2G45070 Preprotein translocase Sec, Sec61-beta subunit protein SUPPRESSORS OF SECRETION-DEFECTIVE
61 BETA		 -0.69 0.31 -0.31
32 AT4G24820 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 -0.69 0.31 -0.33
33 AT3G13930 Dihydrolipoamide acetyltransferase, long form protein -0.69 0.32 -0.3
34 AT1G51710 ubiquitin-specific protease 6 ATUBP6, ubiquitin-specific
protease 6		 -0.68 0.33 -0.3
35 AT3G15352 cytochrome c oxidase 17 ARABIDOPSIS THALIANA CYTOCHROME C
OXIDASE 17, cytochrome c oxidase
17		 -0.68 0.32 -0.33
36 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4		 0.68 0.35 -0.3
37 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 0.68 0.32 -0.32
38 AT3G11280 Duplicated homeodomain-like superfamily protein 0.68 0.32 -0.31
39 AT1G35670 calcium-dependent protein kinase 2 calcium-dependent protein kinase
2, ATCPK11, calcium-dependent
protein kinase 2, CPK11		 -0.68 0.31 -0.32
40 AT5G48030 gametophytic factor 2 gametophytic factor 2 -0.68 0.3 -0.31
41 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 -0.68 0.32 -0.35
42 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 -0.68 0.33 -0.32
43 AT1G67790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits
to 125 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.32
44 AT1G22840 CYTOCHROME C-1 CYTOCHROME C-A, CYTOCHROME C-1 -0.68 0.3 -0.32
45 AT1G64380 Integrase-type DNA-binding superfamily protein 0.68 0.33 -0.33
46 AT4G17530 RAB GTPase homolog 1C RAB GTPase homolog 1C, ATRABD2C,
RAB1C, RAB GTPase homolog 1C		 -0.68 0.31 -0.31
47 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b -0.67 0.3 -0.32
48 AT5G50850 Transketolase family protein MACCI-BOU -0.67 0.31 -0.3
49 AT1G28210 DNAJ heat shock family protein ATJ1 -0.67 0.33 -0.31
50 AT5G40660 ATP12 protein-related -0.67 0.3 -0.31
51 AT4G31340 myosin heavy chain-related -0.67 0.3 -0.32
52 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 -0.67 0.31 -0.33
53 AT4G39880 Ribosomal protein L23/L15e family protein -0.67 0.32 -0.32
54 AT5G11260 Basic-leucine zipper (bZIP) transcription factor family
protein		 ELONGATED HYPOCOTYL 5, REVERSAL OF
THE DET PHENOTYPE 5		 -0.67 0.32 -0.32
55 AT1G10940 Protein kinase superfamily protein ARABIDOPSIS SERINE/THREONINE
KINASE 1, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-4,
SNF1-related protein kinase 2.4,
SRK2A		 -0.67 0.33 -0.32
56 AT5G44710 CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,
mitochondrial (InterPro:IPR013219); Has 101 Blast hits to
101 proteins in 55 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.67 0.34 -0.3
57 AT1G59620 Disease resistance protein (CC-NBS-LRR class) family CW9 0.66 0.32 -0.31
58 AT2G03120 signal peptide peptidase signal peptide peptidase, signal
peptide peptidase		 -0.66 0.32 -0.29
59 AT5G08260 serine carboxypeptidase-like 35 serine carboxypeptidase-like 35 0.66 0.34 -0.31
60 AT5G67500 voltage dependent anion channel 2 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 2, voltage
dependent anion channel 2		 -0.66 0.31 -0.32
61 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A		 -0.66 0.31 -0.31
62 AT3G58460 RHOMBOID-like protein 15 RHOMBOID-like protein 15,
RHOMBOID-like protein 15		 -0.66 0.34 -0.32
63 AT1G44760 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.66 0.32 -0.35
64 AT5G13780 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.66 0.32 -0.33
65 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 -0.66 0.32 -0.32
66 AT2G38480 Uncharacterised protein family (UPF0497) -0.66 0.32 -0.31
67 AT5G38830 Cysteinyl-tRNA synthetase, class Ia family protein -0.66 0.32 -0.29
68 AT5G27395 Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein		 -0.66 0.3 -0.31
69 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.66 0.3 -0.33
70 AT5G63870 serine/threonine phosphatase 7 ATPP7, serine/threonine
phosphatase 7		 -0.65 0.31 -0.3
71 AT2G16365 F-box family protein -0.65 0.32 -0.3
72 AT5G54980 Uncharacterised protein family (UPF0497) 0.65 0.32 -0.34
73 AT1G22540 Major facilitator superfamily protein 0.65 0.33 -0.31
74 AT1G18670 Protein kinase superfamily protein IMPAIRED IN BABA-INDUCED STERILITY
1		 0.65 0.32 -0.3
75 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 -0.64 0.29 -0.33
76 AT4G39570 Galactose oxidase/kelch repeat superfamily protein 0.64 0.3 -0.31
77 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein -0.64 0.32 -0.32
78 AT5G64760 regulatory particle non-ATPase subunit 5B regulatory particle non-ATPase
subunit 5B		 -0.64 0.31 -0.31
79 AT3G18760 Translation elongation factor EF1B/ribosomal protein S6
family protein		 -0.64 0.32 -0.34
80 AT3G20970 NFU domain protein 4 ARABIDOPSIS THALIANA NFU DOMAIN
PROTEIN 2, NFU domain protein 4		 -0.64 0.3 -0.31
81 AT5G03030 Chaperone DnaJ-domain superfamily protein -0.64 0.34 -0.32
82 AT4G01850 S-adenosylmethionine synthetase 2 AtSAM2, MAT2, S-adenosylmethionine
synthetase 2, S-ADENOSYLMETHIONINE
SYNTHETASE 2		 -0.64 0.31 -0.31
83 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7		 0.64 0.3 -0.31
84 AT1G60570 Galactose oxidase/kelch repeat superfamily protein 0.64 0.31 -0.31
85 AT4G08170 Inositol 1,3,4-trisphosphate 5/6-kinase family protein -0.63 0.32 -0.3
86 AT3G43240 ARID/BRIGHT DNA-binding domain-containing protein -0.63 0.31 -0.3
87 AT2G42910 Phosphoribosyltransferase family protein -0.63 0.32 -0.31
88 AT5G17770 NADH:cytochrome B5 reductase 1 NADH:cytochrome B5 reductase 1,
NADH:cytochrome B5 reductase 1,
NADH:CYTOCHROME B5 REDUCTASE 1		 -0.63 0.32 -0.34
89 AT4G31870 glutathione peroxidase 7 GLUTATHIONE PEROXIDASE 7,
glutathione peroxidase 7		 -0.63 0.3 -0.31
90 AT1G68220 Protein of unknown function (DUF1218) 0.63 0.32 -0.31
91 AT5G25470 AP2/B3-like transcriptional factor family protein 0.63 0.31 -0.32
92 AT2G42920 Pentatricopeptide repeat (PPR-like) superfamily protein 0.62 0.31 -0.3
93 AT4G21370 S-locus protein kinase, putative pseudogene of S-locus receptor
kinase a		 0.61 0.31 -0.3
94 AT1G74440 Protein of unknown function (DUF962) 0.61 0.3 -0.32
95 AT4G03580 BEST Arabidopsis thaliana protein match is: Cysteine
proteinases superfamily protein (TAIR:AT5G17080.1); Has 155
Blast hits to 136 proteins in 31 species: Archae - 0;
Bacteria - 11; Metazoa - 28; Fungi - 14; Plants - 17;
Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).		 0.61 0.31 -0.34
96 AT1G12280 LRR and NB-ARC domains-containing disease resistance
protein		 0.61 0.32 -0.31
97 AT3G28590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G79170.1); Has 1 Blast hits to
1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.6 0.31 -0.29
98 AT5G06530 ABC-2 type transporter family protein ATP-binding cassette G22,
Arabidopsis thaliana ATP-binding
cassette G22		 0.6 0.31 -0.32
99 AT5G63520 CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like
(InterPro:IPR022364), FIST C domain (InterPro:IPR019494),
FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast
hits to 137 proteins in 56 species: Archae - 0; Bacteria -
88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.6 0.32 -0.32
100 AT3G04890 Uncharacterized conserved protein (DUF2358) 0.6 0.33 -0.31
101 AT1G66310 F-box/RNI-like/FBD-like domains-containing protein 0.59 0.32 -0.32
102 AT3G22810 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.59 0.31 -0.32
103 AT1G07340 sugar transporter 2 sugar transporter 2, sugar
transporter 2		 0.59 0.31 -0.3
104 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 0.59 0.33 -0.31
105 AT5G03450 Transducin/WD40 repeat-like superfamily protein 0.59 0.33 -0.31
106 AT1G80870 Protein kinase superfamily protein 0.59 0.32 -0.31
107 AT5G25210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.59 0.32 -0.31
108 AT1G60160 Potassium transporter family protein 0.59 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
109 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - -0.82 0.45 -0.45 C0067
110 C0132 Kaempferol-3-O-rutinoside - - - 0.61 0.43 -0.42