AT1G73060 : Low PSII Accumulation 3
Query Information
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AGICode AT1G73060
Description Low PSII Accumulation 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G73060 Low PSII Accumulation 3 Low PSII Accumulation 3 1 0.32 -0.33
2 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein embryo sac development arrest 3 0.9 0.32 -0.29
3 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.32 -0.32
4 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.29 -0.32
5 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GIANT CHLOROPLAST 1, SULA 0.88 0.33 -0.33
6 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.87 0.32 -0.31
7 AT5G63310 nucleoside diphosphate kinase 2 ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE
KINASE 2, NUCLEOSIDE DIPHOSPHATE
KINASE IA, NDPK IA IA, NDP KINASE
1A, nucleoside diphosphate kinase
2		 0.86 0.31 -0.32
8 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.85 0.33 -0.32
9 AT5G12130 integral membrane TerC family protein TELLURITE RESISTANCE C, PIGMENT
DEFECTIVE 149		 0.85 0.31 -0.32
10 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.85 0.31 -0.3
11 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.85 0.33 -0.3
12 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.85 0.31 -0.31
13 AT2G01110 Sec-independent periplasmic protein translocase ALBINO AND PALE GREEN 2, PGA2,
TWIN-ARGININE TRANSLOCATION C,
unfertilized embryo sac 3		 0.85 0.31 -0.33
14 AT5G54290 cytochrome c biogenesis protein family CcdA 0.84 0.33 -0.28
15 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.84 0.3 -0.32
16 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.84 0.31 -0.31
17 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74
proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa
- 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes
- 6 (source: NCBI BLink).		 0.83 0.31 -0.3
18 AT4G37040 methionine aminopeptidase 1D methionine aminopeptidase 1D 0.83 0.32 -0.32
19 AT5G39830 Trypsin family protein with PDZ domain DEG8, DEG PROTEASE 8 0.83 0.3 -0.31
20 AT2G32500 Stress responsive alpha-beta barrel domain protein 0.83 0.31 -0.31
21 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.83 0.32 -0.3
22 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.82 0.32 -0.31
23 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.82 0.32 -0.33
24 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.82 0.32 -0.32
25 AT3G62000 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.82 0.31 -0.31
26 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.82 0.32 -0.31
27 AT1G45474 photosystem I light harvesting complex gene 5 photosystem I light harvesting
complex gene 5		 0.82 0.31 -0.34
28 AT2G24020 Uncharacterised BCR, YbaB family COG0718 0.81 0.33 -0.32
29 AT1G21350 Thioredoxin superfamily protein 0.81 0.31 -0.32
30 AT5G47840 adenosine monophosphate kinase adenosine monophosphate kinase 0.81 0.31 -0.3
31 AT5G27560 Domain of unknown function (DUF1995) 0.81 0.3 -0.32
32 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 0.8 0.32 -0.3
33 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.8 0.31 -0.34
34 AT2G26340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast thylakoid
lumen, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38
proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.8 0.32 -0.33
35 AT1G79790 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 Arabidopsis thaliana chloroplast
FMN hydrolase 1, flavin
mononucleotide hydrolase 1		 0.8 0.3 -0.32
36 AT5G23120 photosystem II stability/assembly factor, chloroplast
(HCF136)		 HIGH CHLOROPHYLL FLUORESCENCE 136 0.8 0.3 -0.29
37 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.8 0.32 -0.31
38 AT5G59250 Major facilitator superfamily protein 0.8 0.31 -0.34
39 AT5G22620 phosphoglycerate/bisphosphoglycerate mutase family protein 0.8 0.3 -0.32
40 AT5G20140 SOUL heme-binding family protein 0.8 0.29 -0.31
41 AT5G40160 Ankyrin repeat family protein EMBRYO DEFECTIVE 139, embryo
defective 506		 0.8 0.31 -0.35
42 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.79 0.31 -0.33
43 AT5G16710 dehydroascorbate reductase 1 dehydroascorbate reductase 1 0.79 0.3 -0.35
44 AT5G38660 acclimation of photosynthesis to environment ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT		 0.79 0.32 -0.29
45 AT2G35450 catalytics;hydrolases 0.79 0.31 -0.33
46 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 0.79 0.3 -0.32
47 AT5G03880 Thioredoxin family protein 0.79 0.33 -0.35
48 AT4G33520 P-type ATP-ase 1 Arabidopsis thaliana heavy metal
ATPase 6, HEAVY METAL ATPASE 6,
P-type ATP-ase 1		 0.78 0.31 -0.32
49 AT3G27050 unknown protein; Has 43 Blast hits to 43 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 0.78 0.32 -0.32
50 AT1G32220 NAD(P)-binding Rossmann-fold superfamily protein 0.78 0.3 -0.31
51 AT1G12410 CLP protease proteolytic subunit 2 CLP protease proteolytic subunit
2, CLPR2, EMBRYO DEFECTIVE 3146,
NUCLEAR-ENCODED CLP PROTEASE P2		 0.78 0.32 -0.33
52 AT1G50320 thioredoxin X thioredoxin X, THIOREDOXIN X,
thioredoxin X		 0.78 0.31 -0.31
53 AT3G52155 Phosphoglycerate mutase family protein 0.78 0.29 -0.29
54 AT3G63510 FMN-linked oxidoreductases superfamily protein 0.78 0.29 -0.33
55 AT2G38370 Plant protein of unknown function (DUF827) -0.68 0.33 -0.3
56 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 -0.65 0.3 -0.31
57 AT2G31990 Exostosin family protein -0.65 0.34 -0.31
58 AT3G15300 VQ motif-containing protein -0.64 0.31 -0.29
59 AT1G30080 Glycosyl hydrolase superfamily protein -0.61 0.32 -0.31
60 AT4G37940 AGAMOUS-like 21 AGAMOUS-like 21 -0.61 0.3 -0.32
61 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.6 0.31 -0.33
62 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.6 0.32 -0.32
63 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.6 0.31 -0.35
64 AT1G11420 DOMAIN OF UNKNOWN FUNCTION 724 2 DOMAIN OF UNKNOWN FUNCTION 724 2,
DOMAIN OF UNKNOWN FUNCTION 724 2		 -0.59 0.32 -0.32
65 AT3G14395 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.32 -0.31
66 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.31 -0.32
67 AT2G45830 downstream target of AGL15 2 downstream target of AGL15 2 -0.56 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
68 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.81 0.41 -0.41