AT1G34310 : auxin response factor 12
Query Information
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AGICode AT1G34310
Description auxin response factor 12
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G34310 auxin response factor 12 auxin response factor 12 1 0.35 -0.3
2 AT1G32060 phosphoribulokinase phosphoribulokinase 0.91 0.32 -0.31
3 AT4G21280 photosystem II subunit QA PHOTOSYSTEM II SUBUNIT Q,
PHOTOSYSTEM II SUBUNIT Q-1,
photosystem II subunit QA		 0.91 0.32 -0.33
4 AT5G45680 FK506-binding protein 13 FK506 BINDING PROTEIN 13,
FK506-binding protein 13		 0.91 0.33 -0.33
5 AT3G01480 cyclophilin 38 ARABIDOPSIS CYCLOPHILIN 38,
cyclophilin 38		 0.9 0.32 -0.32
6 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 glyceraldehyde 3-phosphate
dehydrogenase A subunit 2		 0.9 0.29 -0.31
7 AT3G21055 photosystem II subunit T photosystem II subunit T 0.89 0.32 -0.3
8 AT2G46820 photosystem I P subunit PSAP, photosystem I P subunit,
PLASTID TRANSCRIPTIONALLY ACTIVE
8, THYLAKOID MEMBRANE
PHOSPHOPROTEIN OF 14 KDA		 0.89 0.31 -0.3
9 AT3G55330 PsbP-like protein 1 PsbP-like protein 1 0.89 0.33 -0.3
10 AT3G23700 Nucleic acid-binding proteins superfamily 0.89 0.34 -0.31
11 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein LOW QUANTUM YIELD OF PHOTOSYSTEM
II 1		 0.89 0.32 -0.31
12 AT4G37800 xyloglucan endotransglucosylase/hydrolase 7 xyloglucan
endotransglucosylase/hydrolase 7		 0.89 0.32 -0.31
13 AT1G49975 INVOLVED IN: photosynthesis; LOCATED IN: photosystem I,
chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Photosystem I reaction centre subunit N
(InterPro:IPR008796); Has 34 Blast hits to 34 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.88 0.31 -0.33
14 AT2G27060 Leucine-rich repeat protein kinase family protein 0.88 0.31 -0.32
15 AT3G54050 high cyclic electron flow 1 high cyclic electron flow 1 0.88 0.29 -0.34
16 AT3G56940 dicarboxylate diiron protein, putative (Crd1) ACSF, CHL27, COPPER RESPONSE
DEFECT 1		 0.88 0.34 -0.34
17 AT1G70760 inorganic carbon transport protein-related CHLORORESPIRATORY REDUCTION 23,
NADH dehydrogenase-like complex L		 0.88 0.3 -0.31
18 AT1G55670 photosystem I subunit G photosystem I subunit G 0.88 0.33 -0.3
19 AT1G31330 photosystem I subunit F photosystem I subunit F 0.87 0.32 -0.32
20 AT3G47470 light-harvesting chlorophyll-protein complex I subunit A4 CAB4, light-harvesting
chlorophyll-protein complex I
subunit A4		 0.87 0.33 -0.31
21 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.87 0.32 -0.32
22 AT1G15980 NDH-dependent cyclic electron flow 1 NDH-dependent cyclic electron flow
1, NAD(P)H DEHYDROGENASE SUBUNIT
48, Photosynthetic NDH subcomplex
B 1		 0.87 0.33 -0.34
23 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.87 0.32 -0.29
24 AT5G54270 light-harvesting chlorophyll B-binding protein 3 light-harvesting chlorophyll
B-binding protein 3, LHCB3*1		 0.87 0.33 -0.3
25 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.86 0.32 -0.32
26 AT1G09340 chloroplast RNA binding chloroplast RNA binding,
CHLOROPLAST STEM-LOOP BINDING
PROTEIN OF 41 KDA,
heteroglycan-interacting protein
1.3		 0.86 0.34 -0.31
27 AT4G00950 Protein of unknown function (DUF688) maternal effect embryo arrest 47 0.86 0.32 -0.32
28 AT5G62840 Phosphoglycerate mutase family protein 0.86 0.3 -0.32
29 AT3G48200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to
148 proteins in 42 species: Archae - 0; Bacteria - 118;
Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 44 (source: NCBI BLink).		 0.86 0.34 -0.32
30 AT2G38040 acetyl Co-enzyme a carboxylase carboxyltransferase alpha
subunit		 acetyl Co-enzyme a carboxylase
carboxyltransferase alpha subunit		 0.86 0.34 -0.29
31 AT3G46660 UDP-glucosyl transferase 76E12 UDP-glucosyl transferase 76E12 -0.85 0.31 -0.31
32 AT4G13180 NAD(P)-binding Rossmann-fold superfamily protein -0.85 0.31 -0.29
33 AT1G17220 Translation initiation factor 2, small GTP-binding protein fu-gaeri1 0.85 0.33 -0.33
34 AT3G52380 chloroplast RNA-binding protein 33 chloroplast RNA-binding protein
33, PIGMENT DEFECTIVE 322		 0.85 0.31 -0.31
35 AT4G10340 light harvesting complex of photosystem II 5 light harvesting complex of
photosystem II 5		 0.85 0.33 -0.34
36 AT1G61520 photosystem I light harvesting complex gene 3 photosystem I light harvesting
complex gene 3		 0.85 0.34 -0.31
37 AT3G48720 HXXXD-type acyl-transferase family protein DEFICIENT IN CUTIN FERULATE 0.84 0.34 -0.3
38 AT3G04000 NAD(P)-binding Rossmann-fold superfamily protein -0.84 0.34 -0.31
39 AT2G29420 glutathione S-transferase tau 7 glutathione S-transferase tau 7,
GLUTATHIONE S-TRANSFERASE 25,
glutathione S-transferase tau 7		 -0.84 0.32 -0.31
40 AT5G13630 magnesium-chelatase subunit chlH, chloroplast, putative /
Mg-protoporphyrin IX chelatase, putative (CHLH)		 ABA-BINDING PROTEIN, CONDITIONAL
CHLORINA, CCH1, H SUBUNIT OF
MG-CHELATASE, GENOMES UNCOUPLED 5		 0.84 0.3 -0.33
41 AT3G17820 glutamine synthetase 1.3 ARABIDOPSIS THALIANA GLUTAMINE
SYNTHASE CLONE KB6, glutamine
synthetase 1.3, GLUTAMINE
SYNTHETASE 1;3		 -0.84 0.31 -0.31
42 AT4G19710 aspartate kinase-homoserine dehydrogenase ii ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase ii		 0.84 0.31 -0.31
43 AT5G27600 long-chain acyl-CoA synthetase 7 ATLACS7, long-chain acyl-CoA
synthetase 7		 -0.84 0.35 -0.33
44 AT2G29490 glutathione S-transferase TAU 1 glutathione S-transferase TAU 1,
GLUTATHIONE S-TRANSFERASE 19,
glutathione S-transferase TAU 1		 -0.84 0.34 -0.31
45 AT2G17500 Auxin efflux carrier family protein -0.83 0.32 -0.32
46 AT5G65380 MATE efflux family protein -0.83 0.32 -0.31
47 AT1G29330 ER lumen protein retaining receptor family protein ARABIDOPSIS ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ARABIDOPSIS
THALIANA ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ENDOPLASMIC
RETICULUM RETENTION DEFECTIVE 2		 -0.83 0.32 -0.31
48 ATCG00640 ribosomal protein L33 ribosomal protein L33 0.83 0.34 -0.3
49 AT3G55430 O-Glycosyl hydrolases family 17 protein -0.83 0.32 -0.31
50 AT1G14130 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.83 0.31 -0.31
51 AT2G23150 natural resistance-associated macrophage protein 3 ATNRAMP3, natural
resistance-associated macrophage
protein 3		 -0.83 0.32 -0.3
52 AT5G58350 with no lysine (K) kinase 4 with no lysine (K) kinase 4, ZIK2 -0.82 0.33 -0.32
53 AT4G02940 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.82 0.3 -0.33
54 AT1G76520 Auxin efflux carrier family protein -0.81 0.34 -0.31
55 AT2G30140 UDP-Glycosyltransferase superfamily protein -0.81 0.34 -0.31
56 AT5G57910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.81 0.3 -0.32
57 AT2G36380 pleiotropic drug resistance 6 ATP-binding cassette G34,
PLEIOTROPIC DRUG RESISTANCE 6,
pleiotropic drug resistance 6		 -0.81 0.34 -0.32
58 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 -0.8 0.33 -0.3
59 AT1G53580 glyoxalase II 3 ETHE1-LIKE, GLYOXALASE 2-3,
glyoxalase II 3		 -0.8 0.32 -0.32
60 AT1G66760 MATE efflux family protein -0.8 0.33 -0.34
61 AT2G15480 UDP-glucosyl transferase 73B5 UDP-glucosyl transferase 73B5 -0.8 0.31 -0.3
62 AT1G10140 Uncharacterised conserved protein UCP031279 -0.8 0.3 -0.33
63 AT2G41380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.8 0.33 -0.3
64 AT3G05290 peroxisomal adenine nucleotide carrier 1 AtPNC1, peroxisomal adenine
nucleotide carrier 1		 -0.8 0.31 -0.32
65 AT4G19640 Ras-related small GTP-binding family protein ARA-7, ARA7, ARABIDOPSIS RAB
GTPASE HOMOLOG F2B, ATRAB5B,
ATRABF2B, RAB GTPASE HOMOLOG F2B,
RABF2B		 -0.8 0.32 -0.3
66 AT1G33110 MATE efflux family protein -0.8 0.32 -0.32
67 AT1G62300 WRKY family transcription factor ATWRKY6, WRKY6 -0.8 0.3 -0.32
68 AT3G28740 Cytochrome P450 superfamily protein cytochrome P450, family 81,
subfamily D, polypeptide 11		 -0.8 0.31 -0.31
69 AT1G76470 NAD(P)-binding Rossmann-fold superfamily protein -0.79 0.31 -0.33
70 AT4G37370 cytochrome P450, family 81, subfamily D, polypeptide 8 cytochrome P450, family 81,
subfamily D, polypeptide 8		 -0.79 0.32 -0.32
71 AT3G08690 ubiquitin-conjugating enzyme 11 ATUBC11, ubiquitin-conjugating
enzyme 11		 -0.79 0.3 -0.32
72 AT3G44720 arogenate dehydratase 4 arogenate dehydratase 4 -0.79 0.31 -0.34
73 AT5G64250 Aldolase-type TIM barrel family protein -0.79 0.32 -0.34
74 AT1G68620 alpha/beta-Hydrolases superfamily protein -0.79 0.32 -0.32
75 AT1G32690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast
hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.33 -0.29
76 AT3G57380 Glycosyltransferase family 61 protein -0.79 0.31 -0.3
77 AT4G37310 cytochrome P450, family 81, subfamily H, polypeptide 1 cytochrome P450, family 81,
subfamily H, polypeptide 1		 -0.78 0.32 -0.33
78 AT3G51090 Protein of unknown function (DUF1640) -0.78 0.31 -0.3
79 AT5G05110 Cystatin/monellin family protein -0.78 0.33 -0.31
80 AT1G32940 Subtilase family protein ATSBT3.5, SBT3.5 -0.78 0.31 -0.29
81 AT4G31550 WRKY DNA-binding protein 11 ATWRKY11, WRKY DNA-binding protein
11		 -0.78 0.32 -0.29
82 AT5G63790 NAC domain containing protein 102 NAC domain containing protein 102,
NAC domain containing protein 102		 -0.78 0.32 -0.3
83 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 -0.78 0.3 -0.31
84 AT3G48890 membrane-associated progesterone binding protein 3 ARABIDOPSIS THALIANA
MEMBRANE-ASSOCIATED PROGESTERONE
BINDING PROTEIN 3, ATMP2,
membrane-associated progesterone
binding protein 3, MEMBRANE
STEROID BINDING PROTEIN 2		 -0.78 0.3 -0.31
85 AT5G07440 glutamate dehydrogenase 2 glutamate dehydrogenase 2 -0.78 0.33 -0.3
86 AT1G02500 S-adenosylmethionine synthetase 1 AtSAM1, MAT1, METK1,
S-ADENOSYLMETHIONINE SYNTHETASE-1,
S-adenosylmethionine synthetase 1		 -0.78 0.33 -0.35
87 AT4G37990 elicitor-activated gene 3-2 ARABIDOPSIS THALIANA
CINNAMYL-ALCOHOL DEHYDROGENASE 8,
CINNAMYL-ALCOHOL DEHYDROGENASE B2,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-2		 -0.78 0.31 -0.31
88 AT1G13195 RING/U-box superfamily protein -0.78 0.29 -0.31
89 AT3G15500 NAC domain containing protein 3 NAC domain containing protein 55,
NAC domain containing protein 3,
NAC domain containing protein 55,
NAC domain containing protein 3		 -0.78 0.34 -0.32
90 AT2G06255 ELF4-like 3 ELF4-like 3 -0.78 0.32 -0.33
91 AT2G34660 multidrug resistance-associated protein 2 ATP-binding cassette C2,
Arabidopsis thaliana ATP-binding
cassette C2, multidrug
resistance-associated protein 2,
EST4, multidrug
resistance-associated protein 2		 -0.78 0.31 -0.29
92 AT2G37770 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C9, Chloroplastic aldo-keto
reductase		 -0.78 0.32 -0.29
93 AT1G72900 Toll-Interleukin-Resistance (TIR) domain-containing protein -0.78 0.35 -0.3
94 AT5G09440 EXORDIUM like 4 EXORDIUM like 4 -0.78 0.31 -0.33
95 AT3G26690 nudix hydrolase homolog 13 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 13, nudix
hydrolase homolog 13, nudix
hydrolase homolog 13		 -0.77 0.33 -0.3
96 AT1G54570 Esterase/lipase/thioesterase family protein -0.77 0.33 -0.32
97 AT2G25910 3'-5' exonuclease domain-containing protein / K homology
domain-containing protein / KH domain-containing protein		 -0.77 0.32 -0.31
98 AT3G15180 ARM repeat superfamily protein -0.77 0.32 -0.32
99 AT3G03640 beta glucosidase 25 beta glucosidase 25, GLUC -0.77 0.29 -0.32
100 AT4G29210 gamma-glutamyl transpeptidase 4 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 -0.77 0.31 -0.31
101 AT2G47190 myb domain protein 2 MYB DOMAIN PROTEIN 2, myb domain
protein 2		 -0.77 0.3 -0.33
102 AT1G44350 IAA-leucine resistant (ILR)-like gene 6 IAA-leucine resistant (ILR)-like
gene 6		 -0.77 0.31 -0.32
103 AT1G05680 Uridine diphosphate glycosyltransferase 74E2 Uridine diphosphate
glycosyltransferase 74E2		 -0.77 0.29 -0.33
104 AT4G25230 RPM1 interacting protein 2 RPM1 interacting protein 2 -0.77 0.34 -0.31
105 AT5G26340 Major facilitator superfamily protein SUGAR TRANSPORT PROTEIN 13, MSS1,
SUGAR TRANSPORT PROTEIN 13		 -0.77 0.32 -0.29
106 AT2G15490 UDP-glycosyltransferase 73B4 UDP-glycosyltransferase 73B4 -0.77 0.31 -0.31
107 AT3G45130 lanosterol synthase 1 lanosterol synthase 1 -0.76 0.33 -0.33
108 AT2G29500 HSP20-like chaperones superfamily protein -0.76 0.3 -0.32
109 AT5G61820 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod
19 (InterPro:IPR011692); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.76 0.34 -0.34
110 AT1G30040 gibberellin 2-oxidase gibberellin 2-oxidase, gibberellin
2-oxidase, GIBBERELLIN 2-OXIDASE 2		 -0.76 0.32 -0.28
111 AT4G29490 Metallopeptidase M24 family protein -0.76 0.3 -0.31
112 AT1G01720 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 2, ATAF1		 -0.76 0.31 -0.3
113 AT4G14010 ralf-like 32 ralf-like 32 -0.76 0.29 -0.33
114 AT2G32660 receptor like protein 22 receptor like protein 22, receptor
like protein 22		 -0.76 0.3 -0.33
115 AT1G52890 NAC domain containing protein 19 NAC domain containing protein 19,
NAC domain containing protein 19		 -0.76 0.3 -0.32
116 AT1G70530 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 cysteine-rich RLK (RECEPTOR-like
protein kinase) 3		 -0.76 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.78 0.45 -0.43 C0051