AT1G15310 : signal recognition particle 54 kDa subunit
Query Information
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AGICode AT1G15310
Description signal recognition particle 54 kDa subunit
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 1 0.31 -0.31
2 AT4G16240 unknown protein; Has 17010 Blast hits to 4557 proteins in
509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537;
Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes
- 1688 (source: NCBI BLink).		 0.79 0.31 -0.31
3 AT2G30010 TRICHOME BIREFRINGENCE-LIKE 45 TRICHOME BIREFRINGENCE-LIKE 45 -0.77 0.32 -0.32
4 AT2G43570 chitinase, putative chitinase, putative 0.77 0.33 -0.3
5 AT1G04520 plasmodesmata-located protein 2 plasmodesmata-located protein 2 -0.76 0.3 -0.32
6 AT5G18780 F-box/RNI-like superfamily protein 0.75 0.31 -0.3
7 AT2G42580 tetratricopetide-repeat thioredoxin-like 3 tetratricopetide-repeat
thioredoxin-like 3,
VHI-INTERACTING TPR CONTAINING
PROTEIN		 -0.74 0.31 -0.31
8 AT4G36210 Protein of unknown function (DUF726) 0.74 0.3 -0.29
9 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.73 0.31 -0.31
10 AT3G06750 hydroxyproline-rich glycoprotein family protein -0.73 0.33 -0.31
11 AT2G18050 histone H1-3 histone H1-3 0.73 0.31 -0.33
12 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 -0.73 0.32 -0.31
13 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.73 0.33 -0.34
14 AT5G53870 early nodulin-like protein 1 AtENODL1, early nodulin-like
protein 1		 0.72 0.32 -0.31
15 AT5G13100 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.72 0.28 -0.31
16 AT3G18780 actin 2 actin 2, DEFORMED ROOT HAIRS 1,
ENHANCER OF LRX1 2, FRIZZY AND
KINKED SHOOTS 2, LIGHT
STRESS-REGULATED 2		 -0.72 0.31 -0.32
17 AT1G04530 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 4 -0.72 0.32 -0.32
18 AT5G51460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 ATTPPA -0.72 0.31 -0.31
19 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 0.72 0.33 -0.29
20 AT1G12500 Nucleotide-sugar transporter family protein -0.72 0.31 -0.33
21 AT5G16480 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP5, plant and fungi
atypical dual-specificity
phosphatase 5		 -0.71 0.32 -0.31
22 AT1G33170 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.71 0.34 -0.32
23 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein -0.71 0.33 -0.31
24 AT4G30960 SOS3-interacting protein 3 CBL-INTERACTING PROTEIN KINASE 6,
CBL-INTERACTING PROTEIN KINASE 6,
SOS3-interacting protein 3,
SNF1-RELATED PROTEIN KINASE 3.14		 0.71 0.3 -0.32
25 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 0.71 0.32 -0.34
26 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B 0.71 0.33 -0.31
27 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 0.71 0.29 -0.31
28 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 -0.71 0.33 -0.3
29 AT3G46040 ribosomal protein S15A D ribosomal protein S15A D -0.71 0.31 -0.31
30 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 0.7 0.31 -0.31
31 AT5G62360 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.7 0.34 -0.33
32 AT1G48610 AT hook motif-containing protein -0.7 0.3 -0.33
33 AT4G02020 SET domain-containing protein EZA1, SET DOMAIN-CONTAINING
PROTEIN 10, SWINGER		 0.7 0.32 -0.28
34 AT3G01860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to cadmium ion; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast
hits to 66 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.32
35 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 0.7 0.32 -0.33
36 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 0.69 0.31 -0.31
37 AT1G74770 zinc ion binding -0.69 0.33 -0.29
38 AT2G19620 N-MYC downregulated-like 3 N-MYC downregulated-like 3 -0.69 0.28 -0.29
39 AT1G32740 SBP (S-ribonuclease binding protein) family protein 0.69 0.35 -0.32
40 AT1G17830 Protein of unknown function (DUF789) 0.69 0.33 -0.33
41 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 -0.69 0.32 -0.3
42 AT1G55265 Protein of unknown function, DUF538 0.68 0.28 -0.32
43 AT3G07320 O-Glycosyl hydrolases family 17 protein -0.68 0.3 -0.3
44 AT1G03790 Zinc finger C-x8-C-x5-C-x3-H type family protein SOMNUS 0.68 0.31 -0.29
45 AT1G71020 ARM repeat superfamily protein -0.68 0.31 -0.3
46 AT2G35650 cellulose synthase like cellulose synthase like, ATCSLA7,
CSLA07, cellulose synthase like,
CELLULOSE SYNTHASE LIKE A7		 -0.68 0.3 -0.33
47 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 -0.68 0.31 -0.29
48 AT1G08810 myb domain protein 60 myb domain protein 60, myb domain
protein 60		 -0.68 0.35 -0.31
49 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 -0.68 0.3 -0.32
50 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 0.67 0.32 -0.32
51 AT2G05760 Xanthine/uracil permease family protein -0.67 0.32 -0.33
52 AT5G35360 acetyl Co-enzyme a carboxylase biotin carboxylase subunit acetyl Co-enzyme a carboxylase
biotin carboxylase subunit		 -0.67 0.31 -0.32
53 AT4G33550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.67 0.29 -0.32
54 AT1G77940 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.67 0.3 -0.31
55 AT2G20840 Secretory carrier membrane protein (SCAMP) family protein -0.67 0.32 -0.33
56 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 0.67 0.31 -0.34
57 AT5G07300 Calcium-dependent phospholipid-binding Copine family
protein		 BONZAI 2 -0.67 0.33 -0.31
58 AT5G27470 seryl-tRNA synthetase / serine--tRNA ligase -0.67 0.3 -0.3
59 AT2G40610 expansin A8 ATEXP8, expansin A8, ATHEXP ALPHA
1.11, EXP8, expansin A8		 -0.67 0.32 -0.32
60 AT3G03630 cysteine synthase 26 cysteine synthase 26 -0.66 0.3 -0.34
61 AT3G46880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G59080.1); Has 51 Blast
hits to 51 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.31
62 AT4G22010 SKU5 similar 4 SKU5 similar 4 -0.66 0.31 -0.31
63 AT1G30825 Arp2/3 complex, 34 kD subunit p34-Arc ACTIN-RELATED PROTEIN C2A,
DISTORTED TRICHOMES 2		 -0.66 0.32 -0.33
64 AT5G22740 cellulose synthase-like A02 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE A02, ARABIDOPSIS
THALIANA CELLULOSE SYNTHASE-LIKE
A2, cellulose synthase-like A02,
CELLULOSE SYNTHASE-LIKE A 2		 -0.66 0.31 -0.31
65 AT5G04190 phytochrome kinase substrate 4 phytochrome kinase substrate 4 -0.66 0.32 -0.33
66 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 -0.66 0.33 -0.31
67 AT3G05730 Encodes a defensin-like (DEFL) family protein. -0.66 0.32 -0.32
68 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.65 0.31 -0.3
69 AT1G69740 Aldolase superfamily protein HEMB1 -0.65 0.32 -0.29
70 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.65 0.31 -0.31
71 AT1G01830 ARM repeat superfamily protein 0.65 0.31 -0.3
72 AT5G05010 clathrin adaptor complexes medium subunit family protein -0.65 0.32 -0.28
73 AT4G17560 Ribosomal protein L19 family protein -0.65 0.31 -0.33
74 AT4G26610 D6 protein kinase like 1 AGC1-2, D6 protein kinase like 1 -0.65 0.31 -0.31
75 AT2G38320 TRICHOME BIREFRINGENCE-LIKE 34 TRICHOME BIREFRINGENCE-LIKE 34 -0.65 0.35 -0.31
76 AT5G60490 FASCICLIN-like arabinogalactan-protein 12 FASCICLIN-like
arabinogalactan-protein 12		 -0.65 0.31 -0.3
77 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 0.65 0.3 -0.32
78 AT4G34265 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast
hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.3 -0.3
79 AT5G22580 Stress responsive A/B Barrel Domain -0.65 0.31 -0.31
80 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 -0.64 0.32 -0.33
81 AT1G12310 Calcium-binding EF-hand family protein -0.64 0.3 -0.31
82 AT5G22460 alpha/beta-Hydrolases superfamily protein 0.64 0.31 -0.32
83 AT3G24570 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.64 0.32 -0.33
84 AT1G04270 cytosolic ribosomal protein S15 cytosolic ribosomal protein S15 -0.64 0.33 -0.32
85 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 -0.64 0.31 -0.31
86 AT5G15930 plant adhesion molecule 1 plant adhesion molecule 1 -0.64 0.33 -0.3
87 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 -0.64 0.31 -0.31
88 AT2G20140 AAA-type ATPase family protein regulatory particle AAA-ATPase 2b -0.63 0.32 -0.3
89 AT2G17120 lysm domain GPI-anchored protein 2 precursor lysm domain GPI-anchored protein 2
precursor		 0.63 0.3 -0.3
90 AT3G05990 Leucine-rich repeat (LRR) family protein -0.63 0.31 -0.3
91 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 -0.63 0.31 -0.3
92 AT1G56590 Clathrin adaptor complexes medium subunit family protein ZIG SUPPRESSOR 4 -0.63 0.34 -0.32
93 AT3G11945 homogentisate prenyltransferase homogentisate prenyltransferase,
homogentisate prenyltransferase,
PHYTOENE DESATURATION 2		 -0.63 0.29 -0.33
94 AT1G76010 Alba DNA/RNA-binding protein -0.63 0.33 -0.33
95 AT1G20160 Subtilisin-like serine endopeptidase family protein ATSBT5.2 0.63 0.32 -0.29
96 AT4G09730 RH39 RH39 -0.63 0.31 -0.32
97 AT1G54360 TBP-ASSOCIATED FACTOR 6B TBP-ASSOCIATED FACTOR 6B,
TBP-ASSOCIATED FACTOR 6B1,
TBP-ASSOCIATED FACTOR 6B2,
TBP-associated factor 6B4		 0.63 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0138 Linarin - - - -0.7 0.46 -0.46