AT1G59720 : CHLORORESPIRATORY REDUCTION28
Query Information
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AGICode AT1G59720
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G59720 Tetratricopeptide repeat (TPR)-like superfamily protein CHLORORESPIRATORY REDUCTION28 1 0.35 -0.32
2 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.33 -0.3
3 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.85 0.32 -0.33
4 AT5G57180 chloroplast import apparatus 2 chloroplast import apparatus 2 0.85 0.33 -0.31
5 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.84 0.31 -0.32
6 AT3G61150 homeodomain GLABROUS 1 HOMEODOMAIN-GLABRA2 1, homeodomain
GLABROUS 1		 0.84 0.33 -0.31
7 AT4G22530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.84 0.32 -0.31
8 AT4G21190 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1417 0.82 0.33 -0.31
9 AT2G26230 uricase / urate oxidase / nodulin 35, putative -0.81 0.31 -0.33
10 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.81 0.3 -0.34
11 AT1G72680 cinnamyl-alcohol dehydrogenase CINNAMYL ALCOHOL DEHYDROGENASE 1,
cinnamyl-alcohol dehydrogenase		 -0.81 0.33 -0.31
12 AT4G26060 Ribosomal protein L18ae family -0.81 0.32 -0.33
13 AT4G07390 Mannose-P-dolichol utilization defect 1 protein -0.81 0.33 -0.34
14 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.81 0.29 -0.31
15 AT1G60420 DC1 domain-containing protein -0.8 0.33 -0.32
16 AT1G21810 Plant protein of unknown function (DUF869) 0.8 0.32 -0.33
17 AT5G04810 pentatricopeptide (PPR) repeat-containing protein 0.8 0.3 -0.35
18 AT1G27000 Protein of unknown function (DUF1664) -0.8 0.32 -0.3
19 AT3G02360 6-phosphogluconate dehydrogenase family protein -0.79 0.33 -0.32
20 AT4G23885 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.79 0.3 -0.32
21 AT3G46000 actin depolymerizing factor 2 actin depolymerizing factor 2 -0.79 0.28 -0.33
22 AT4G30000 Dihydropterin pyrophosphokinase / Dihydropteroate synthase 0.79 0.32 -0.33
23 AT3G43610 Spc97 / Spc98 family of spindle pole body (SBP) component 0.79 0.3 -0.31
24 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.79 0.32 -0.32
25 AT2G01470 SEC12P-like 2 protein ATSEC12, SEC12P-like 2 protein -0.79 0.31 -0.32
26 AT4G01460 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.79 0.34 -0.32
27 AT3G50530 CDPK-related kinase CDPK-related kinase 0.79 0.31 -0.31
28 AT4G37080 Protein of unknown function, DUF547 0.79 0.3 -0.32
29 AT1G26540 Agenet domain-containing protein 0.79 0.31 -0.3
30 AT5G59140 BTB/POZ domain-containing protein -0.78 0.31 -0.32
31 AT3G15180 ARM repeat superfamily protein -0.78 0.3 -0.32
32 AT2G37450 nodulin MtN21 /EamA-like transporter family protein 0.78 0.32 -0.3
33 AT5G19210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.31 -0.32
34 AT1G68140 Protein of unknown function (DUF1644) -0.78 0.33 -0.34
35 AT3G61780 embryo defective 1703 embryo defective 1703 0.78 0.31 -0.32
36 AT4G32710 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 14		 0.78 0.31 -0.31
37 AT1G23440 Peptidase C15, pyroglutamyl peptidase I-like -0.78 0.29 -0.32
38 AT5G51040 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF339 (InterPro:IPR005631); Has 532 Blast
hits to 532 proteins in 207 species: Archae - 0; Bacteria -
285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0;
Other Eukaryotes - 150 (source: NCBI BLink).		 -0.77 0.31 -0.3
39 AT1G42550 plastid movement impaired1 PLASTID MOVEMENT IMPAIRED1 0.77 0.32 -0.32
40 AT1G61390 S-locus lectin protein kinase family protein 0.77 0.33 -0.33
41 AT2G39725 LYR family of Fe/S cluster biogenesis protein -0.77 0.31 -0.32
42 AT1G54340 isocitrate dehydrogenase isocitrate dehydrogenase -0.77 0.33 -0.32
43 AT1G68300 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.77 0.31 -0.29
44 AT3G16260 tRNAse Z4 tRNAse Z4 0.77 0.32 -0.32
45 AT2G40960 Single-stranded nucleic acid binding R3H protein 0.77 0.35 -0.31
46 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 0.77 0.31 -0.32
47 AT1G10850 Leucine-rich repeat protein kinase family protein 0.76 0.31 -0.32
48 AT4G29750 CRS1 / YhbY (CRM) domain-containing protein 0.76 0.32 -0.33
49 AT4G20330 Transcription initiation factor TFIIE, beta subunit -0.76 0.3 -0.29
50 AT5G17650 glycine/proline-rich protein -0.76 0.32 -0.32
51 AT1G77110 Auxin efflux carrier family protein PIN-FORMED 6 0.76 0.3 -0.3
52 AT5G56150 ubiquitin-conjugating enzyme 30 ubiquitin-conjugating enzyme 30 -0.76 0.31 -0.32
53 AT2G47470 thioredoxin family protein ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 11, PDI-LIKE
2-1, MATERNAL EFFECT EMBRYO ARREST
30, PROTEIN DISULFIDE ISOMERASE
11, UNFERTILIZED EMBRYO SAC 5		 -0.76 0.31 -0.3
54 AT3G44320 nitrilase 3 NITRILASE 3, nitrilase 3 -0.76 0.3 -0.32
55 AT1G77920 bZIP transcription factor family protein -0.75 0.34 -0.33
56 AT3G27380 succinate dehydrogenase 2-1 succinate dehydrogenase 2-1 -0.75 0.33 -0.31
57 AT5G55850 RPM1-interacting protein 4 (RIN4) family protein NOI -0.75 0.31 -0.33
58 AT2G27730 copper ion binding -0.75 0.34 -0.29
59 AT3G53970 proteasome inhibitor-related -0.75 0.32 -0.33
60 AT5G63450 cytochrome P450, family 94, subfamily B, polypeptide 1 cytochrome P450, family 94,
subfamily B, polypeptide 1		 -0.75 0.33 -0.3
61 AT5G63680 Pyruvate kinase family protein -0.75 0.32 -0.31
62 AT2G02810 UDP-galactose transporter 1 UDP-GALACTOSE TRANSPORTER 1,
UDP-galactose transporter 1		 -0.74 0.3 -0.32
63 AT4G33780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40
Blast hits to 40 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.33 -0.31
64 AT4G17830 Peptidase M20/M25/M40 family protein -0.74 0.34 -0.3
65 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.31 -0.34
66 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.73 0.35 -0.33
67 AT1G77510 PDI-like 1-2 PROTEIN DISULFIDE ISOMERASE 6,
PDI-like 1-2, PROTEIN DISULFIDE
ISOMERASE 6, PDI-like 1-2		 -0.73 0.32 -0.31
68 AT1G17080 Ribosomal protein L18ae family -0.73 0.32 -0.32
69 AT5G64370 beta-ureidopropionase beta-ureidopropionase, PYRIMIDINE
3		 -0.73 0.33 -0.28
70 AT5G03160 homolog of mamallian P58IPK homolog of mamallian P58IPK,
homolog of mamallian P58IPK		 -0.73 0.32 -0.32
71 AT1G24050 RNA-processing, Lsm domain -0.73 0.33 -0.31
72 AT2G25110 stromal cell-derived factor 2-like protein precursor Arabidopsis thaliana STROMAL
CELL-DERIVED FACTOR 2-like protein
precursor, ATSDF2-LIKE, stromal
cell-derived factor 2-like protein
precursor		 -0.73 0.33 -0.33
73 AT1G45050 Ubiquitin-conjugating enzyme family protein ATUBC2-1, Arabidopsis thaliana
ubiquitin-conjugating enzyme 15		 -0.73 0.32 -0.31
74 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 -0.73 0.32 -0.33
75 AT5G04830 Nuclear transport factor 2 (NTF2) family protein -0.73 0.32 -0.31
76 AT2G29500 HSP20-like chaperones superfamily protein -0.72 0.33 -0.32
77 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 -0.72 0.31 -0.32
78 AT1G55080 MED9; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757
proteins in 1293 species: Archae - 12; Bacteria - 4374;
Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses -
273; Other Eukaryotes - 24337 (source: NCBI BLink).		 MED9 -0.72 0.3 -0.31
79 AT3G11770 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.72 0.31 -0.3
80 AT3G03740 BTB-POZ and MATH domain 4 BTB-POZ AND MATH DOMAIN 4, BTB-POZ
and MATH domain 4		 -0.72 0.31 -0.32
81 AT5G07220 BCL-2-associated athanogene 3 BCL-2-associated athanogene 3,
BCL-2-associated athanogene 3		 -0.72 0.32 -0.34
82 AT1G26550 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.72 0.33 -0.31
83 AT5G47200 RAB GTPase homolog 1A RAB GTPase homolog 1A, ARABIDOPSIS
RAB GTPASE HOMOLOG D2B, RAB GTPase
homolog 1A		 -0.72 0.32 -0.31
84 AT5G54500 flavodoxin-like quinone reductase 1 flavodoxin-like quinone reductase
1		 -0.72 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
85 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.83 0.41 -0.44 C0120
86 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.76 0.43 -0.44 C0220