AT1G30610 : EMBRYO DEFECTIVE 2279
Query Information
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AGICode AT1G30610
Description pentatricopeptide (PPR) repeat-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 1 0.3 -0.3
2 AT1G71720 Nucleic acid-binding proteins superfamily PIGMENT DEFECTIVE 338 0.88 0.31 -0.28
3 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.87 0.32 -0.28
4 AT4G21190 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1417 0.87 0.31 -0.33
5 AT3G29375 XH domain-containing protein 0.86 0.32 -0.33
6 AT3G10160 DHFS-FPGS homolog C A. THALIANA DHFS-FPGS HOMOLOG C,
DHFS-FPGS homolog C,
folylpolyglutamate synthetase 2		 0.84 0.32 -0.32
7 AT2G31530 SecY protein transport family protein EMBRYO DEFECTIVE 2289, SECY
HOMOLOG 2		 0.84 0.31 -0.32
8 AT2G04270 RNAse E/G-like RNAse E/G-like 0.84 0.31 -0.32
9 AT3G60620 cytidinediphosphate diacylglycerol synthase 5 cytidinediphosphate diacylglycerol
synthase 5		 0.83 0.34 -0.32
10 AT3G04340 FtsH extracellular protease family embryo defective 2458 0.83 0.31 -0.31
11 AT3G51870 Mitochondrial substrate carrier family protein 0.83 0.31 -0.34
12 AT1G20870 HSP20-like chaperones superfamily protein 0.83 0.3 -0.3
13 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.83 0.3 -0.33
14 AT1G67690 Zincin-like metalloproteases family protein 0.83 0.3 -0.31
15 AT4G24810 Protein kinase superfamily protein 0.82 0.33 -0.3
16 AT3G23070 CRM family member 3A ATCFM3A, CRM family member 3A 0.82 0.35 -0.3
17 AT1G50450 Saccharopine dehydrogenase 0.82 0.33 -0.3
18 AT1G64430 Pentatricopeptide repeat (PPR) superfamily protein 0.81 0.31 -0.31
19 AT2G47220 DOMAIN OF UNKNOWN FUNCTION 724 5 DOMAIN OF UNKNOWN FUNCTION 724 5,
DOMAIN OF UNKNOWN FUNCTION 724 5		 0.81 0.33 -0.35
20 AT5G19210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.32 -0.31
21 AT1G77110 Auxin efflux carrier family protein PIN-FORMED 6 0.81 0.31 -0.27
22 AT2G13440 glucose-inhibited division family A protein 0.8 0.3 -0.33
23 AT4G18240 starch synthase 4 ARABIDOPSIS THALIANA STARCH
SYNTHASE 4, starch synthase 4,
STARCH SYNTHASE 4		 0.79 0.33 -0.3
24 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 0.79 0.3 -0.31
25 AT3G28850 Glutaredoxin family protein -0.79 0.3 -0.31
26 AT4G17360 Formyl transferase 0.79 0.32 -0.31
27 AT3G13310 Chaperone DnaJ-domain superfamily protein -0.78 0.33 -0.33
28 AT5G18940 Mo25 family protein 0.78 0.3 -0.32
29 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.78 0.32 -0.29
30 AT1G75010 GTP binding ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 3		 0.77 0.32 -0.33
31 AT1G45230 Protein of unknown function (DUF3223) 0.77 0.33 -0.3
32 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 0.77 0.3 -0.31
33 AT1G59720 Tetratricopeptide repeat (TPR)-like superfamily protein CHLORORESPIRATORY REDUCTION28 0.77 0.32 -0.32
34 AT1G25280 tubby like protein 10 tubby like protein 10, tubby like
protein 10		 -0.77 0.3 -0.32
35 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.77 0.33 -0.32
36 AT5G15760 Ribosomal protein PSRP-3/Ycf65 0.77 0.35 -0.33
37 AT4G30825 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.32 -0.3
38 ATCG00630 PSAJ PSAJ 0.76 0.33 -0.31
39 AT4G34020 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog C, DJ-1 homolog C 0.76 0.32 -0.3
40 AT2G45700 sterile alpha motif (SAM) domain-containing protein 0.76 0.33 -0.29
41 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.76 0.32 -0.33
42 AT2G47520 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana ethylene
response factor 71, ethylene
response factor 71, HYPOXIA
RESPONSIVE ERF (ETHYLENE RESPONSE
FACTOR) 2		 -0.76 0.31 -0.31
43 AT2G37300 unknown protein; Has 93 Blast hits to 62 proteins in 29
species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi -
19; Plants - 25; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink).		 ATP-binding cassette I16 0.76 0.31 -0.3
44 AT1G71810 Protein kinase superfamily protein 0.76 0.33 -0.32
45 ATCG00480 ATP synthase subunit beta ATP synthase subunit beta, ATP
synthase subunit beta		 0.75 0.31 -0.31
46 AT4G38780 Pre-mRNA-processing-splicing factor 0.75 0.31 -0.32
47 AT3G43610 Spc97 / Spc98 family of spindle pole body (SBP) component 0.75 0.31 -0.32
48 AT2G45150 cytidinediphosphate diacylglycerol synthase 4 cytidinediphosphate diacylglycerol
synthase 4		 0.75 0.32 -0.32
49 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 0.75 0.34 -0.3
50 AT3G61980 serine protease inhibitor, Kazal-type family protein -0.74 0.32 -0.33
51 AT5G54500 flavodoxin-like quinone reductase 1 flavodoxin-like quinone reductase
1		 -0.74 0.31 -0.34
52 AT5G59140 BTB/POZ domain-containing protein -0.73 0.31 -0.33
53 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.72 0.31 -0.31
54 AT4G07390 Mannose-P-dolichol utilization defect 1 protein -0.72 0.33 -0.31
55 AT1G74590 glutathione S-transferase TAU 10 GLUTATHIONE S-TRANSFERASE TAU 10,
glutathione S-transferase TAU 10		 -0.72 0.33 -0.31
56 AT3G55600 Membrane fusion protein Use1 -0.71 0.32 -0.31
57 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 -0.71 0.31 -0.31
58 AT1G02400 gibberellin 2-oxidase 6 Arabidopsis thaliana gibberellin
2-oxidase 4, ARABIDOPSIS THALIANA
GIBBERELLIN 2-OXIDASE 6,
DOWNSTREAM TARGET OF AGL15 1,
gibberellin 2-oxidase 6		 -0.7 0.31 -0.34
59 AT2G47470 thioredoxin family protein ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 11, PDI-LIKE
2-1, MATERNAL EFFECT EMBRYO ARREST
30, PROTEIN DISULFIDE ISOMERASE
11, UNFERTILIZED EMBRYO SAC 5		 -0.7 0.32 -0.33
60 AT5G58500 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 5 -0.7 0.3 -0.32
61 AT2G16595 Translocon-associated protein (TRAP), alpha subunit -0.7 0.3 -0.31
62 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 -0.69 0.32 -0.32
63 AT5G40660 ATP12 protein-related -0.69 0.32 -0.3
64 AT5G11970 Protein of unknown function (DUF3511) -0.69 0.28 -0.31
65 AT2G36330 Uncharacterised protein family (UPF0497) -0.69 0.31 -0.32
66 AT2G46140 Late embryogenesis abundant protein -0.69 0.31 -0.33
67 AT3G04060 NAC domain containing protein 46 NAC domain containing protein 46,
NAC domain containing protein 46		 -0.69 0.34 -0.3
68 AT1G05280 Protein of unknown function (DUF604) -0.68 0.33 -0.32
69 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.68 0.32 -0.32
70 AT1G71190 senescence associated gene 18 senescence associated gene 18 -0.68 0.35 -0.32
71 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.68 0.33 -0.31
72 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 -0.68 0.31 -0.33
73 AT3G50900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits
to 45 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.32 -0.3
74 AT5G16440 isopentenyl diphosphate isomerase 1 isopentenyl diphosphate isomerase
1		 -0.68 0.3 -0.31
75 AT1G28280 VQ motif-containing protein -0.68 0.33 -0.32
76 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 -0.67 0.32 -0.32
77 AT1G35330 RING/U-box superfamily protein -0.67 0.32 -0.34
78 AT2G33710 Integrase-type DNA-binding superfamily protein -0.67 0.32 -0.35
79 AT1G59590 ZCF37 ZCF37 -0.67 0.31 -0.31
80 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.66 0.33 -0.3
81 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A -0.66 0.32 -0.32
82 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.66 0.3 -0.32
83 AT5G42790 proteasome alpha subunit F1 ARSENIC TOLERANCE 5, ATPSM30,
proteasome alpha subunit F1		 -0.66 0.3 -0.32
84 AT3G55950 CRINKLY4 related 3 ATCRR3, CRINKLY4 related 3 -0.66 0.3 -0.32
85 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 -0.66 0.29 -0.32
86 AT3G06760 Drought-responsive family protein -0.65 0.32 -0.3
87 AT3G27560 Protein kinase superfamily protein ATN1 -0.65 0.29 -0.31
88 AT4G13130 Cysteine/Histidine-rich C1 domain family protein -0.65 0.31 -0.33
89 AT2G45400 NAD(P)-binding Rossmann-fold superfamily protein BEN1 -0.65 0.33 -0.3
90 AT4G15120 VQ motif-containing protein -0.65 0.32 -0.33
91 AT5G57620 myb domain protein 36 myb domain protein 36, myb domain
protein 36		 -0.65 0.31 -0.29
92 AT2G31090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.31 -0.3
93 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.3
94 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.64 0.3 -0.32
95 AT5G44710 CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,
mitochondrial (InterPro:IPR013219); Has 101 Blast hits to
101 proteins in 55 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.64 0.31 -0.31
96 AT4G15955 alpha/beta-Hydrolases superfamily protein -0.64 0.31 -0.33