AT1G10490 : -
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AGICode AT1G10490
Description Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)
1 0.32 -0.33
2 AT1G13030 sphere organelles protein-related 0.89 0.31 -0.29
3 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase
0.87 0.31 -0.31
4 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1
0.87 0.3 -0.3
5 AT3G11964 RNA binding;RNA binding 0.87 0.31 -0.32
6 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.86 0.33 -0.29
7 AT5G11240 transducin family protein / WD-40 repeat family protein 0.85 0.31 -0.3
8 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.84 0.34 -0.32
9 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.84 0.3 -0.31
10 AT1G79150 binding 0.84 0.32 -0.29
11 AT4G25340 FK506 BINDING PROTEIN 53 ATFKBP53, FK506 BINDING PROTEIN 53 0.84 0.28 -0.31
12 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.84 0.32 -0.31
13 AT3G55510 Noc2p family REBELOTE 0.84 0.32 -0.3
14 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1
0.83 0.32 -0.28
15 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.83 0.3 -0.32
16 AT2G40430 CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687),
Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has
709 Blast hits to 643 proteins in 201 species: Archae - 0;
Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45;
Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).
0.83 0.31 -0.31
17 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1
0.82 0.32 -0.3
18 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.82 0.31 -0.32
19 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.82 0.32 -0.33
20 AT3G58660 Ribosomal protein L1p/L10e family 0.82 0.3 -0.3
21 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.82 0.33 -0.32
22 AT5G20600 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: preribosome, small subunit
precursor; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits
to 530 proteins in 201 species: Archae - 0; Bacteria - 10;
Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other
Eukaryotes - 112 (source: NCBI BLink).
0.82 0.32 -0.33
23 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).
0.81 0.33 -0.32
24 AT4G25730 FtsJ-like methyltransferase family protein 0.81 0.33 -0.31
25 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 0.81 0.34 -0.33
26 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.81 0.29 -0.32
27 AT3G06530 ARM repeat superfamily protein 0.81 0.32 -0.33
28 AT3G16810 pumilio 24 pumilio 24, pumilio 24 0.81 0.3 -0.31
29 AT3G21540 transducin family protein / WD-40 repeat family protein 0.81 0.31 -0.33
30 AT5G14520 pescadillo-related 0.81 0.32 -0.31
31 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.8 0.3 -0.33
32 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)
0.8 0.32 -0.31
33 AT1G13160 ARM repeat superfamily protein 0.8 0.31 -0.32
34 AT1G79150 binding 0.8 0.31 -0.32
35 AT3G12270 protein arginine methyltransferase 3 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 3,
protein arginine methyltransferase
3
0.8 0.31 -0.32
36 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).
0.8 0.3 -0.31
37 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2
0.8 0.31 -0.33
38 AT1G10270 glutamine-rich protein 23 glutamine-rich protein 23 0.79 0.3 -0.31
39 AT4G04940 transducin family protein / WD-40 repeat family protein 0.79 0.31 -0.33
40 AT5G15550 Transducin/WD40 repeat-like superfamily protein 0.79 0.3 -0.31
41 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.79 0.3 -0.32
42 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.79 0.3 -0.32
43 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.79 0.31 -0.32
44 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2
0.79 0.29 -0.31
45 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.79 0.33 -0.31
46 AT5G66540 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: cytosol, nucleolus, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: U3 small
nucleolar ribonucleoprotein complex, subunit Mpp10p
(InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).
0.78 0.31 -0.31
47 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).
AtNUFIP, nuclear FMRP-interacting
protein
0.78 0.33 -0.31
48 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f -0.78 0.31 -0.32
49 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.78 0.31 -0.31
50 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2
0.78 0.32 -0.33
51 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4
0.78 0.31 -0.3
52 AT4G30990 ARM repeat superfamily protein 0.78 0.31 -0.31
53 AT3G07750 3'-5'-exoribonuclease family protein 0.78 0.31 -0.32
54 AT1G69950 transposable element gene 0.78 0.31 -0.32
55 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain
0.78 0.31 -0.31
56 AT1G30960 GTP-binding family protein 0.78 0.32 -0.34
57 AT4G23540 ARM repeat superfamily protein 0.78 0.29 -0.33
58 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain 0.78 0.32 -0.31
59 AT5G12200 pyrimidine 2 pyrimidine 2 -0.77 0.31 -0.32
60 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).
0.77 0.31 -0.33
61 AT1G54380 spliceosome protein-related 0.77 0.31 -0.3
62 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.77 0.34 -0.32
63 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.77 0.33 -0.32
64 AT5G20200 nucleoporin-related 0.77 0.31 -0.3
65 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 0.77 0.32 -0.3
66 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.77 0.31 -0.32
67 AT5G05210 Surfeit locus protein 6 0.76 0.31 -0.31
68 AT2G34357 ARM repeat superfamily protein 0.76 0.33 -0.31
69 AT5G59980 Polymerase/histidinol phosphatase-like 0.76 0.32 -0.32
70 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.32
71 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein
0.76 0.31 -0.32
72 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative 0.76 0.32 -0.31
73 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.76 0.33 -0.31
74 AT5G64420 DNA polymerase V family 0.75 0.33 -0.31
75 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.75 0.31 -0.3
76 AT4G28990 RNA-binding protein-related 0.74 0.32 -0.32
77 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein
0.74 0.31 -0.32
78 AT3G60340 alpha/beta-Hydrolases superfamily protein -0.74 0.32 -0.32
79 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.74 0.32 -0.32
80 AT3G10690 DNA GYRASE A DNA GYRASE A 0.74 0.31 -0.31
81 AT1G02370 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.31 -0.32
82 AT1G64600 methyltransferases;copper ion binding 0.74 0.31 -0.31
83 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2
0.74 0.31 -0.3
84 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein
0.74 0.31 -0.32
85 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.74 0.31 -0.3
86 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).
0.74 0.34 -0.3
87 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).
-0.73 0.3 -0.32
88 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.73 0.33 -0.31
89 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin -0.73 0.31 -0.33
90 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 -0.72 0.3 -0.3
91 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 -0.72 0.3 -0.33
92 AT1G47330 CBS domain-containing protein with a domain of unknown
function (DUF21)
-0.72 0.32 -0.32
93 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A
-0.72 0.34 -0.31
94 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1
-0.72 0.31 -0.33
95 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.72 0.32 -0.29
96 AT5G45350 proline-rich family protein -0.71 0.33 -0.31
97 AT5G19590 Protein of unknown function, DUF538 -0.71 0.32 -0.31
98 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.71 0.33 -0.31
99 AT3G18295 Protein of unknown function (DUF1639) -0.71 0.32 -0.32
100 AT5G27350 Major facilitator superfamily protein SFP1 -0.71 0.33 -0.32
101 AT2G23780 RING/U-box superfamily protein -0.71 0.32 -0.3
102 AT2G44850 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0565
(InterPro:IPR018881); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast
hits to 138 proteins in 53 species: Archae - 0; Bacteria -
0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).
-0.71 0.33 -0.32
103 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.7 0.3 -0.31
104 AT5G65760 Serine carboxypeptidase S28 family protein -0.7 0.29 -0.35
105 AT5G13760 Plasma-membrane choline transporter family protein -0.7 0.32 -0.31
106 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.7 0.32 -0.32
107 AT5G48810 cytochrome B5 isoform D ATB5-B, ARABIDOPSIS CYTOCHROME B5
ISOFORM D, B5 #3, cytochrome B5
isoform D
-0.69 0.29 -0.3
108 AT5G19120 Eukaryotic aspartyl protease family protein -0.69 0.33 -0.31
109 AT1G09415 NIM1-interacting 3 NIM1-interacting 3 -0.69 0.32 -0.3
110 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein -0.69 0.32 -0.3
111 AT3G11230 Yippee family putative zinc-binding protein -0.69 0.32 -0.31
112 AT1G33780 Protein of unknown function (DUF179) -0.69 0.31 -0.31
113 AT3G54480 SKP1/ASK-interacting protein 5 SKP1/ASK-interacting protein 5,
SKP5
-0.68 0.34 -0.3
114 AT1G55000 peptidoglycan-binding LysM domain-containing protein -0.68 0.32 -0.31
115 AT1G80920 Chaperone DnaJ-domain superfamily protein AtJ8, translocon at the outer
envelope membrane of chloroplasts
12, J8, translocon at the outer
envelope membrane of chloroplasts
12
-0.68 0.31 -0.31
116 AT1G67560 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
6, lipoxygenase 6
-0.68 0.32 -0.3
117 AT5G67150 HXXXD-type acyl-transferase family protein -0.67 0.28 -0.32
118 AT4G14930 Survival protein SurE-like phosphatase/nucleotidase -0.67 0.33 -0.31
119 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.67 0.33 -0.3
120 AT2G36360 Galactose oxidase/kelch repeat superfamily protein -0.66 0.33 -0.31
121 AT1G10150 Carbohydrate-binding protein -0.66 0.3 -0.32
122 AT3G45770 Polyketide synthase, enoylreductase family protein -0.66 0.29 -0.32
123 AT1G05060 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.66 0.31 -0.3
124 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
-0.66 0.31 -0.3
125 AT4G13950 ralf-like 31 ralf-like 31 -0.65 0.31 -0.31
126 AT3G48350 Cysteine proteinases superfamily protein cysteine endopeptidase 3 -0.65 0.31 -0.31
127 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.64 0.31 -0.32
128 AT1G49740 PLC-like phosphodiesterases superfamily protein -0.64 0.32 -0.31
129 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.63 0.31 -0.3
130 AT3G53180 glutamate-ammonia ligases;catalytics;glutamate-ammonia
ligases
nodulin/glutamine synthase-like
protein
-0.63 0.32 -0.31
131 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.63 0.3 -0.31
132 AT4G23410 tetraspanin5 tetraspanin5 -0.63 0.29 -0.34
133 AT4G20820 FAD-binding Berberine family protein -0.63 0.31 -0.32
134 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3
-0.62 0.31 -0.3
135 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 -0.62 0.31 -0.32
136 AT3G61430 plasma membrane intrinsic protein 1A ARABIDOPSIS THALIANA PLASMA
MEMBRANE INTRINSIC PROTEIN 1,
PLASMA MEMBRANE INTRINSIC PROTEIN
1, PLASMA MEMBRANE INTRINSIC
PROTEIN 1;1, plasma membrane
intrinsic protein 1A
-0.62 0.31 -0.32
137 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B -0.62 0.32 -0.32
138 AT2G20630 PP2C induced by AVRRPM1 PP2C induced by AVRRPM1 -0.62 0.3 -0.31
139 AT3G15353 metallothionein 3 ATMT3, metallothionein 3 -0.62 0.31 -0.31
140 AT2G34690 Glycolipid transfer protein (GLTP) family protein ACCELERATED CELL DEATH 11 -0.62 0.32 -0.3