AT2G40200 : -
Query Information
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AGICode AT2G40200
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 1 0.33 -0.32
2 AT1G76390 ARM repeat superfamily protein plant U-box 43 0.87 0.31 -0.32
3 AT3G52850 vacuolar sorting receptor homolog 1 ARABIDOPSIS THALIANA EPIDERMAL
GROWTH FACTOR RECEPTOR-LIKE
PROTEIN, ATELP1, ATVSR1, BP-80,
BP80, binding protein of 80 kDa
1;1, BP80B, Green fluorescent seed
1, vacuolar sorting receptor
homolog 1, VACUOLAR SORTING
RECEPTOR 1;1		 0.84 0.32 -0.32
4 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM 0.83 0.31 -0.29
5 AT5G14590 Isocitrate/isopropylmalate dehydrogenase family protein 0.83 0.32 -0.31
6 AT3G02875 Peptidase M20/M25/M40 family protein IAA-LEUCINE RESISTANT 1 0.83 0.29 -0.31
7 AT1G69930 glutathione S-transferase TAU 11 glutathione S-transferase TAU 11,
glutathione S-transferase TAU 11		 0.83 0.31 -0.34
8 AT3G57520 seed imbibition 2 seed imbibition 2, raffinose
synthase 2, seed imbibition 2		 0.82 0.3 -0.31
9 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 0.81 0.32 -0.33
10 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ATBSMT1, BSMT1 0.81 0.32 -0.32
11 AT3G05970 long-chain acyl-CoA synthetase 6 ATLACS6, long-chain acyl-CoA
synthetase 6		 0.81 0.31 -0.32
12 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 0.81 0.32 -0.28
13 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 0.81 0.31 -0.29
14 AT2G32660 receptor like protein 22 receptor like protein 22, receptor
like protein 22		 0.81 0.32 -0.32
15 AT5G57150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.81 0.31 -0.31
16 AT5G51560 Leucine-rich repeat protein kinase family protein -0.8 0.32 -0.3
17 AT1G20560 acyl activating enzyme 1 acyl activating enzyme 1 0.8 0.31 -0.33
18 AT2G27820 prephenate dehydratase 1 arogenate dehydratase 3,
prephenate dehydratase 1		 0.8 0.33 -0.31
19 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 0.8 0.29 -0.29
20 AT3G21250 multidrug resistance-associated protein 6 ATP-binding cassette C8,
ARABIDOPSIS THALIANA MULTIDRUG
RESISTANCE-ASSOCIATED PROTEIN 6,
multidrug resistance-associated
protein 6		 0.8 0.33 -0.32
21 AT5G11420 Protein of unknown function, DUF642 -0.8 0.33 -0.3
22 AT3G08030 Protein of unknown function, DUF642 -0.8 0.35 -0.32
23 AT5G65750 2-oxoglutarate dehydrogenase, E1 component 0.8 0.3 -0.32
24 AT3G60130 beta glucosidase 16 beta glucosidase 16 0.8 0.32 -0.33
25 AT3G22550 Protein of unknown function (DUF581) 0.79 0.3 -0.32
26 AT4G24000 cellulose synthase like G2 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G2, cellulose
synthase like G2		 0.79 0.31 -0.28
27 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.79 0.32 -0.29
28 AT1G21880 lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1
precursor		 -0.78 0.31 -0.35
29 AT1G22930 T-complex protein 11 0.78 0.32 -0.31
30 AT1G10540 nucleobase-ascorbate transporter 8 ATNAT8, nucleobase-ascorbate
transporter 8		 0.78 0.32 -0.32
31 AT5G48900 Pectin lyase-like superfamily protein -0.78 0.31 -0.33
32 AT3G12710 DNA glycosylase superfamily protein -0.78 0.31 -0.32
33 AT1G02470 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.78 0.32 -0.33
34 AT2G29470 glutathione S-transferase tau 3 glutathione S-transferase tau 3,
GLUTATHIONE S-TRANSFERASE 21,
glutathione S-transferase tau 3		 0.78 0.31 -0.31
35 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 0.78 0.29 -0.33
36 AT4G38860 SAUR-like auxin-responsive protein family -0.78 0.29 -0.32
37 AT1G04680 Pectin lyase-like superfamily protein -0.77 0.33 -0.32
38 AT5G64770 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 9 -0.77 0.3 -0.31
39 AT1G05940 cationic amino acid transporter 9 cationic amino acid transporter 9 0.77 0.32 -0.32
40 AT2G25950 Protein of unknown function (DUF1000) 0.77 0.31 -0.33
41 AT1G72800 RNA-binding (RRM/RBD/RNP motifs) family protein 0.77 0.34 -0.29
42 AT5G06260 TLD-domain containing nucleolar protein 0.77 0.3 -0.32
43 AT1G16520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast
hits to 234 proteins in 69 species: Archae - 2; Bacteria -
2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0;
Other Eukaryotes - 44 (source: NCBI BLink).		 -0.77 0.31 -0.3
44 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 0.77 0.32 -0.33
45 AT1G30690 Sec14p-like phosphatidylinositol transfer family protein -0.77 0.31 -0.3
46 AT1G04240 AUX/IAA transcriptional regulator family protein indole-3-acetic acid inducible 3,
SHORT HYPOCOTYL 2		 -0.77 0.3 -0.3
47 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8		 -0.77 0.31 -0.33
48 AT1G30090 Galactose oxidase/kelch repeat superfamily protein 0.77 0.32 -0.31
49 AT3G16370 GDSL-like Lipase/Acylhydrolase superfamily protein -0.76 0.32 -0.32
50 AT5G44240 aminophospholipid ATPase 2 aminophospholipid ATPase 2 0.76 0.3 -0.31
51 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 0.76 0.31 -0.29
52 AT5G40210 nodulin MtN21 /EamA-like transporter family protein 0.76 0.33 -0.32
53 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.76 0.31 -0.31
54 AT2G29350 senescence-associated gene 13 senescence-associated gene 13 0.76 0.31 -0.33
55 AT2G36950 Heavy metal transport/detoxification superfamily protein 0.76 0.33 -0.32
56 AT5G25460 Protein of unknown function, DUF642 -0.76 0.32 -0.29
57 AT3G63150 MIRO-related GTP-ase 2 CALCIUM BINDING GTP-ASE,
MIRO-related GTP-ase 2		 0.76 0.32 -0.32
58 AT5G18060 SAUR-like auxin-responsive protein family -0.76 0.29 -0.32
59 AT5G55120 galactose-1-phosphate guanylyltransferase
(GDP)s;GDP-D-glucose phosphorylases;quercetin
4'-O-glucosyltransferases		 VITAMIN C DEFECTIVE 5 0.75 0.31 -0.33
60 AT5G66460 Glycosyl hydrolase superfamily protein AtMAN7, endo-beta-mannase 7 -0.75 0.32 -0.28
61 AT3G17250 Protein phosphatase 2C family protein 0.75 0.32 -0.33
62 AT2G38810 histone H2A 8 histone H2A 8 -0.75 0.32 -0.33
63 AT4G05160 AMP-dependent synthetase and ligase family protein 0.75 0.29 -0.34
64 AT4G10050 esterase/lipase/thioesterase family protein 0.75 0.32 -0.34
65 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1		 0.75 0.31 -0.31
66 AT3G30390 Transmembrane amino acid transporter family protein 0.75 0.32 -0.32
67 AT2G41820 Leucine-rich repeat protein kinase family protein -0.75 0.31 -0.31
68 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 0.75 0.3 -0.31
69 AT1G80160 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 7 0.75 0.32 -0.3
70 AT2G38050 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATDET2, DE-ETIOLATED 2, DWARF 6 0.75 0.32 -0.32
71 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B -0.75 0.31 -0.33
72 AT5G19530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ACAULIS 5 -0.74 0.32 -0.33
73 AT1G23080 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 7,
PIN-FORMED 7		 -0.74 0.32 -0.32
74 AT3G54560 histone H2A 11 histone H2A 11 -0.74 0.3 -0.31
75 AT4G31840 early nodulin-like protein 15 AtENODL15, early nodulin-like
protein 15		 -0.73 0.32 -0.31
76 AT2G37190 Ribosomal protein L11 family protein -0.73 0.32 -0.34
77 AT3G29280 unknown protein; Has 24 Blast hits to 24 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.34 -0.32
78 AT5G66310 ATP binding microtubule motor family protein -0.73 0.32 -0.33
79 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 -0.73 0.3 -0.32
80 AT2G35190 novel plant snare 11 ATNPSN11, novel plant snare 11,
NSPN11		 -0.73 0.31 -0.32
81 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 -0.73 0.31 -0.31
82 AT5G27720 Small nuclear ribonucleoprotein family protein embryo defective 1644, SM-like
protein 4		 -0.72 0.31 -0.32
83 AT1G16920 RAB GTPase homolog A1B RAB GTPase homolog A1B, RAB11, RAB
GTPase homolog A1B		 -0.72 0.32 -0.31
84 AT5G01910 unknown protein; Has 66 Blast hits to 66 proteins in 27
species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7;
Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.72 0.32 -0.32
85 AT3G62630 Protein of unknown function (DUF1645) -0.72 0.29 -0.31
86 AT5G07590 Transducin/WD40 repeat-like superfamily protein -0.72 0.32 -0.3
87 AT5G66920 SKU5 similar 17 SKU5 similar 17 -0.72 0.31 -0.31
88 AT5G24330 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 6, SET DOMAIN PROTEIN 34		 -0.72 0.32 -0.32
89 AT5G08640 flavonol synthase 1 ATFLS1, FLAVONOL SYNTHASE,
flavonol synthase 1		 -0.72 0.32 -0.33
90 AT3G62620 sucrose-phosphatase-related -0.71 0.33 -0.33
91 AT3G56810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 14 Blast hits to 14 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.3 -0.31
92 AT2G44440 Emsy N Terminus (ENT) domain-containing protein AtEML4, EMSY-like 4 -0.71 0.32 -0.33
93 AT5G19670 Exostosin family protein -0.71 0.33 -0.34
94 AT1G72230 Cupredoxin superfamily protein -0.71 0.32 -0.31
95 AT3G56130 biotin/lipoyl attachment domain-containing protein -0.7 0.32 -0.31
96 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 -0.7 0.3 -0.31
97 AT4G26760 microtubule-associated protein 65-2 microtubule-associated protein
65-2		 -0.7 0.29 -0.33
98 AT5G15160 BANQUO 2 BASIC HELIX-LOOP-HELIX PROTEIN
134, BANQUO 2		 -0.7 0.32 -0.32
99 AT1G29500 SAUR-like auxin-responsive protein family -0.7 0.3 -0.32
100 AT5G45670 GDSL-like Lipase/Acylhydrolase superfamily protein -0.7 0.36 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.86 0.47 -0.47 C0220