AT2G21860 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G21860
Description violaxanthin de-epoxidase-related
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G21860 violaxanthin de-epoxidase-related 1 0.32 -0.32
2 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.9 0.32 -0.31
3 AT2G43030 Ribosomal protein L3 family protein 0.9 0.31 -0.31
4 AT5G63050 embryo defective 2759 embryo defective 2759 0.9 0.31 -0.29
5 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.89 0.29 -0.32
6 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.89 0.33 -0.34
7 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.89 0.32 -0.33
8 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.89 0.32 -0.3
9 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.89 0.32 -0.31
10 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.88 0.34 -0.32
11 AT3G52380 chloroplast RNA-binding protein 33 chloroplast RNA-binding protein
33, PIGMENT DEFECTIVE 322		 0.88 0.32 -0.31
12 AT5G54600 Translation protein SH3-like family protein 0.88 0.31 -0.32
13 AT1G06190 Rho termination factor 0.87 0.31 -0.32
14 AT4G36390 Methylthiotransferase 0.87 0.3 -0.3
15 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C 0.87 0.34 -0.34
16 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.87 0.32 -0.3
17 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.87 0.32 -0.32
18 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.87 0.33 -0.3
19 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.87 0.3 -0.34
20 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.87 0.32 -0.31
21 AT3G08740 elongation factor P (EF-P) family protein 0.86 0.3 -0.32
22 AT3G19810 Protein of unknown function (DUF177) 0.86 0.32 -0.31
23 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.86 0.31 -0.32
24 AT1G15690 Inorganic H pyrophosphatase family protein ARABIDOPSIS THALIANA V-PPASE 3,
AtVHP1;1, AVP-3, AVP1, FUGU 5		 0.86 0.32 -0.32
25 AT5G59500 protein C-terminal S-isoprenylcysteine carboxyl
O-methyltransferases		 0.85 0.29 -0.31
26 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.85 0.31 -0.32
27 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.85 0.32 -0.34
28 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.85 0.33 -0.31
29 AT3G04760 Pentatricopeptide repeat (PPR-like) superfamily protein 0.85 0.33 -0.32
30 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.85 0.31 -0.29
31 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.85 0.33 -0.32
32 AT5G42130 Mitochondrial substrate carrier family protein AtMfl1, MitoFerrinLike1 0.84 0.32 -0.31
33 AT2G20020 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ATCAF1, CAF1 0.84 0.31 -0.31
34 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.84 0.32 -0.32
35 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.84 0.3 -0.3
36 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.84 0.29 -0.3
37 AT4G39120 myo-inositol monophosphatase like 2 HISTIDINE BIOSYNTHESIS 7,
myo-inositol monophosphatase like
2		 0.83 0.33 -0.3
38 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.83 0.33 -0.34
39 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.83 0.32 -0.3
40 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.83 0.29 -0.31
41 AT1G08640 Chloroplast J-like domain 1 Chloroplast J-like domain 1 0.83 0.3 -0.32
42 AT3G60620 cytidinediphosphate diacylglycerol synthase 5 cytidinediphosphate diacylglycerol
synthase 5		 0.82 0.31 -0.31
43 AT3G20320 trigalactosyldiacylglycerol2 ATP-binding cassette I15,
trigalactosyldiacylglycerol2		 0.82 0.31 -0.3
44 AT5G20720 chaperonin 20 ATCPN21, CHLOROPLAST CHAPERONIN
10, CHLOROPLAST CHAPERONIN 10,
chaperonin 20, CPN21		 0.82 0.32 -0.34
45 AT3G56330 N2,N2-dimethylguanosine tRNA methyltransferase 0.82 0.32 -0.32
46 AT2G47400 CP12 domain-containing protein 1 CP12 DOMAIN-CONTAINING PROTEIN 1,
CP12 domain-containing protein 1		 0.82 0.3 -0.32
47 AT1G70730 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 2 0.82 0.33 -0.29
48 AT2G41980 Protein with RING/U-box and TRAF-like domains 0.82 0.3 -0.31
49 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.75 0.34 -0.32
50 AT2G40110 Yippee family putative zinc-binding protein -0.73 0.32 -0.32
51 AT5G66650 Protein of unknown function (DUF607) -0.71 0.33 -0.31
52 AT1G24440 RING/U-box superfamily protein -0.71 0.32 -0.3
53 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.7 0.31 -0.32
54 AT2G43290 Calcium-binding EF-hand family protein multicopy suppressors of snf4
deficiency in yeast 3		 -0.7 0.31 -0.29
55 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.69 0.31 -0.33
56 AT2G36220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52710.1); Has 74 Blast hits
to 74 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.3 -0.31
57 AT1G76040 calcium-dependent protein kinase 29 calcium-dependent protein kinase
29		 -0.68 0.31 -0.31
58 AT2G33580 Protein kinase superfamily protein -0.68 0.31 -0.32
59 AT2G01180 phosphatidic acid phosphatase 1 ATLPP1, phosphatidic acid
phosphatase 1, LIPID PHOSPHATE
PHOSPHATASE 1, phosphatidic acid
phosphatase 1		 -0.68 0.32 -0.32
60 AT5G10695 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.33 -0.33
61 AT2G23810 tetraspanin8 tetraspanin8 -0.67 0.33 -0.31
62 AT2G32030 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.67 0.31 -0.3
63 AT5G45110 NPR1-like protein 3 ATNPR3, NPR1-like protein 3 -0.67 0.31 -0.32
64 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.66 0.31 -0.32
65 AT2G31880 Leucine-rich repeat protein kinase family protein EVERSHED, SUPPRESSOR OF BIR1 1 -0.66 0.32 -0.31
66 AT1G59590 ZCF37 ZCF37 -0.66 0.31 -0.32
67 AT5G14130 Peroxidase superfamily protein -0.65 0.31 -0.32
68 AT3G52400 syntaxin of plants 122 ATSYP122, syntaxin of plants 122 -0.64 0.31 -0.3
69 AT3G19580 zinc-finger protein 2 zinc-finger protein 2, zinc-finger
protein 2		 -0.63 0.3 -0.32
70 AT1G28130 Auxin-responsive GH3 family protein GH3.17 -0.63 0.33 -0.3
71 AT3G49530 NAC domain containing protein 62 NAC domain containing protein 62,
NAC domain containing protein 62,
NTM1 (NAC WITH TRANSMEMBRANE MOTIF
1)-LIKE 6		 -0.63 0.3 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
72 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.77 0.44 -0.45 C0051