AT2G42740 : ribosomal protein large subunit 16A
Query Information
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AGICode AT2G42740
Description ribosomal protein large subunit 16A
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 1 0.31 -0.32
2 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase -0.86 0.31 -0.31
3 AT5G52810 NAD(P)-binding Rossmann-fold superfamily protein -0.84 0.3 -0.3
4 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.84 0.32 -0.31
5 AT5G20280 sucrose phosphate synthase 1F sucrose phosphate synthase 1F,
sucrose phosphate synthase 1F,
sucrose-phosphate synthase A1		 -0.83 0.32 -0.33
6 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM -0.83 0.32 -0.34
7 AT5G17860 calcium exchanger 7 calcium exchanger 7 -0.83 0.32 -0.3
8 AT3G22550 Protein of unknown function (DUF581) -0.82 0.32 -0.31
9 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.81 0.29 -0.32
10 AT5G66230 Chalcone-flavanone isomerase family protein 0.81 0.33 -0.3
11 AT1G02305 Cysteine proteinases superfamily protein -0.81 0.33 -0.33
12 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 -0.81 0.33 -0.33
13 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 0.81 0.3 -0.34
14 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.81 0.3 -0.33
15 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.81 0.3 -0.32
16 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 -0.81 0.31 -0.32
17 AT2G37760 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C8		 -0.81 0.3 -0.33
18 AT2G29350 senescence-associated gene 13 senescence-associated gene 13 -0.8 0.29 -0.31
19 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.8 0.32 -0.3
20 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.8 0.31 -0.33
21 AT3G61960 Protein kinase superfamily protein -0.8 0.33 -0.33
22 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.79 0.31 -0.35
23 AT5G07590 Transducin/WD40 repeat-like superfamily protein 0.79 0.31 -0.32
24 AT1G02470 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.79 0.33 -0.31
25 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 -0.79 0.3 -0.31
26 AT2G43510 trypsin inhibitor protein 1 trypsin inhibitor protein 1,
trypsin inhibitor protein 1		 -0.79 0.33 -0.31
27 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.32 -0.31
28 AT1G16920 RAB GTPase homolog A1B RAB GTPase homolog A1B, RAB11, RAB
GTPase homolog A1B		 0.78 0.32 -0.3
29 AT1G66390 myb domain protein 90 ATMYB90, myb domain protein 90,
PRODUCTION OF ANTHOCYANIN PIGMENT
2		 -0.78 0.31 -0.33
30 AT2G18400 ribosomal protein L6 family protein 0.78 0.32 -0.29
31 AT4G30130 Protein of unknown function (DUF630 and DUF632) 0.78 0.3 -0.31
32 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 0.78 0.32 -0.31
33 AT1G08230 Transmembrane amino acid transporter family protein ATGAT1, L-GAMMA-AMINOBUTYRIC ACID
TRANSPORTER 1		 -0.78 0.31 -0.33
34 AT5G52450 MATE efflux family protein -0.78 0.3 -0.3
35 AT2G37770 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C9, Chloroplastic aldo-keto
reductase		 -0.78 0.33 -0.3
36 AT3G21750 UDP-glucosyl transferase 71B1 UDP-glucosyl transferase 71B1 -0.78 0.31 -0.31
37 AT3G02050 K+ uptake transporter 3 ARABIDOPSIS THALIANA POTASSIUM
TRANSPORTER 4, ATKUP3, K+ uptake
transporter 3		 -0.77 0.31 -0.31
38 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).		 -0.77 0.34 -0.32
39 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.77 0.32 -0.3
40 AT5G13100 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.77 0.3 -0.34
41 AT3G23600 alpha/beta-Hydrolases superfamily protein -0.77 0.32 -0.3
42 AT5G27450 mevalonate kinase mevalonate kinase, MEVALONATE
KINASE		 0.77 0.3 -0.31
43 AT3G59140 multidrug resistance-associated protein 14 ATP-binding cassette C10,
multidrug resistance-associated
protein 14, multidrug
resistance-associated protein 14		 -0.77 0.32 -0.31
44 AT3G26380 Melibiase family protein -0.77 0.32 -0.32
45 AT1G17830 Protein of unknown function (DUF789) -0.77 0.3 -0.31
46 AT4G15490 UDP-Glycosyltransferase superfamily protein UGT84A3 -0.77 0.33 -0.28
47 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.77 0.31 -0.29
48 AT4G37310 cytochrome P450, family 81, subfamily H, polypeptide 1 cytochrome P450, family 81,
subfamily H, polypeptide 1		 -0.76 0.31 -0.31
49 AT4G33950 Protein kinase superfamily protein OPEN STOMATA 1, OPEN STOMATA 1,
P44, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-6,
SNF1-RELATED PROTEIN KINASE 2.6,
SRK2E		 -0.76 0.31 -0.31
50 AT1G59700 glutathione S-transferase TAU 16 glutathione S-transferase TAU 16,
glutathione S-transferase TAU 16		 -0.76 0.31 -0.33
51 AT3G51730 saposin B domain-containing protein -0.76 0.3 -0.32
52 AT2G36970 UDP-Glycosyltransferase superfamily protein -0.76 0.32 -0.32
53 AT4G37150 methyl esterase 9 ARABIDOPSIS THALIANA METHYL
ESTERASE 9, methyl esterase 9		 -0.76 0.31 -0.32
54 AT1G04520 plasmodesmata-located protein 2 plasmodesmata-located protein 2 0.76 0.3 -0.32
55 AT3G51430 Calcium-dependent phosphotriesterase superfamily protein STRICTOSIDINE SYNTHASE-LIKE 5,
YELLOW-LEAF-SPECIFIC GENE 2		 -0.76 0.31 -0.33
56 AT3G46110 Domain of unknown function (DUF966) -0.76 0.32 -0.31
57 AT2G29570 proliferating cell nuclear antigen 2 A. THALIANA PROLIFERATING CELL
NUCLEAR ANTIGEN 2, proliferating
cell nuclear antigen 2		 0.76 0.32 -0.31
58 AT5G53350 CLP protease regulatory subunit X CLP protease regulatory subunit X -0.76 0.3 -0.3
59 AT2G01350 quinolinate phoshoribosyltransferase quinolinate
phoshoribosyltransferase		 -0.76 0.29 -0.32
60 AT5G10650 RING/U-box superfamily protein -0.76 0.32 -0.34
61 AT3G02530 TCP-1/cpn60 chaperonin family protein 0.76 0.33 -0.29
62 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 0.76 0.3 -0.32
63 AT5G24330 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 6, SET DOMAIN PROTEIN 34		 0.76 0.32 -0.31
64 AT3G14620 cytochrome P450, family 72, subfamily A, polypeptide 8 cytochrome P450, family 72,
subfamily A, polypeptide 8		 -0.76 0.33 -0.32
65 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 -0.75 0.32 -0.3
66 AT5G22860 Serine carboxypeptidase S28 family protein -0.75 0.32 -0.3
67 AT1G17020 senescence-related gene 1 SENESCENCE-RELATED GENE 1,
senescence-related gene 1		 -0.75 0.31 -0.3
68 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 -0.75 0.33 -0.32
69 AT5G14700 NAD(P)-binding Rossmann-fold superfamily protein -0.75 0.32 -0.34
70 AT2G38810 histone H2A 8 histone H2A 8 0.75 0.33 -0.31
71 AT1G31550 GDSL-like Lipase/Acylhydrolase superfamily protein -0.75 0.31 -0.28
72 AT1G17745 D-3-phosphoglycerate dehydrogenase 3-phosphoglycerate dehydrogenase -0.75 0.33 -0.34
73 AT2G11910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 92883 Blast hits to
31060 proteins in 1576 species: Archae - 765; Bacteria -
32670; Metazoa - 21164; Fungi - 12252; Plants - 4238;
Viruses - 1282; Other Eukaryotes - 20512 (source: NCBI
BLink).		 0.75 0.33 -0.32
74 AT4G33040 Thioredoxin superfamily protein -0.75 0.31 -0.32
75 AT1G79610 Na+/H+ antiporter 6 ARABIDOPSIS NA+/H+ ANTIPORTER 6,
Na+/H+ antiporter 6		 -0.75 0.32 -0.33
76 AT1G02640 beta-xylosidase 2 BETA-XYLOSIDASE 2, beta-xylosidase
2		 0.75 0.3 -0.3
77 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 0.75 0.3 -0.31
78 AT1G21880 lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1
precursor		 0.74 0.31 -0.31
79 AT4G22260 Alternative oxidase family protein IMMUTANS, IM1 -0.74 0.29 -0.31
80 AT1G71140 MATE efflux family protein -0.74 0.33 -0.31
81 AT3G46670 UDP-glucosyl transferase 76E11 UDP-glucosyl transferase 76E11 -0.74 0.31 -0.3
82 AT2G24180 cytochrome p450 71b6 cytochrome p450 71b6 -0.74 0.35 -0.32
83 AT5G46350 WRKY DNA-binding protein 8 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 8, WRKY
DNA-binding protein 8		 -0.74 0.32 -0.29
84 AT1G78670 gamma-glutamyl hydrolase 3 gamma-glutamyl hydrolase 3,
gamma-glutamyl hydrolase 3		 -0.74 0.31 -0.33
85 AT3G48020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.33 -0.29
86 AT2G35940 BEL1-like homeodomain 1 BEL1-like homeodomain 1, embryo
sac development arrest 29		 -0.74 0.32 -0.33
87 AT4G25000 alpha-amylase-like alpha-amylase-like, ATAMY1 -0.74 0.33 -0.3
88 AT5G41060 DHHC-type zinc finger family protein 0.74 0.35 -0.29
89 AT2G38120 Transmembrane amino acid transporter family protein AUXIN RESISTANT 1, MODIFIER OF
ARF7/NPH4 PHENOTYPES 1, PIR1, WAVY
ROOTS 5		 0.73 0.3 -0.32
90 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 -0.73 0.33 -0.31
91 AT5G65990 Transmembrane amino acid transporter family protein -0.73 0.32 -0.28
92 AT5G61640 peptidemethionine sulfoxide reductase 1 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE A1,
peptidemethionine sulfoxide
reductase 1		 -0.73 0.33 -0.33
93 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.73 0.3 -0.32
94 AT1G68300 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.73 0.32 -0.33
95 AT1G64900 cytochrome P450, family 89, subfamily A, polypeptide 2 CYP89, cytochrome P450, family 89,
subfamily A, polypeptide 2		 -0.73 0.3 -0.34
96 AT3G12710 DNA glycosylase superfamily protein 0.73 0.32 -0.31
97 AT1G56650 production of anthocyanin pigment 1 MYB DOMAIN PROTEIN 75,
MYELOBLASTOSIS PROTEIN 75,
production of anthocyanin pigment
1, SUC-INDUCED ANTHOCYANIN
ACCUMULATION 1		 -0.73 0.31 -0.33
98 AT4G34230 cinnamyl alcohol dehydrogenase 5 cinnamyl alcohol dehydrogenase 5,
cinnamyl alcohol dehydrogenase 5,
cinnamyl alcohol dehydrogenase 5		 -0.73 0.31 -0.3
99 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 0.73 0.32 -0.32
100 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 -0.73 0.32 -0.33
101 AT1G49860 glutathione S-transferase (class phi) 14 glutathione S-transferase (class
phi) 14, glutathione S-transferase
(class phi) 14		 0.73 0.3 -0.29
102 AT5G63030 Thioredoxin superfamily protein glutaredoxin C1 -0.73 0.34 -0.32
103 AT1G18720 Protein of unknown function (DUF962) -0.73 0.35 -0.32
104 AT1G11910 aspartic proteinase A1 aspartic proteinase A1, ATAPA1 -0.73 0.32 -0.32
105 AT3G46040 ribosomal protein S15A D ribosomal protein S15A D 0.73 0.32 -0.34
106 AT3G03890 FMN binding -0.72 0.29 -0.31
107 AT1G49670 ARP protein (REF) NQR -0.72 0.31 -0.34
108 AT5G53420 CCT motif family protein -0.72 0.32 -0.31
109 AT3G50770 calmodulin-like 41 calmodulin-like 41 -0.72 0.32 -0.33
110 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.34 -0.33
111 AT3G54650 RNI-like superfamily protein FBL17 0.72 0.33 -0.31
112 AT1G23190 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 3 -0.72 0.31 -0.32
113 AT5G14590 Isocitrate/isopropylmalate dehydrogenase family protein -0.72 0.32 -0.31
114 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.72 0.3 -0.33
115 AT5G62530 aldehyde dehydrogenase 12A1 aldehyde dehydrogenase 12A1,
ARABIDOPSIS THALIANA
DELTA1-PYRROLINE-5-CARBOXYLATE
DEHYDROGENASE,
DELTA1-PYRROLINE-5-CARBOXYLATE
DEHYDROGENASE		 -0.72 0.31 -0.32
116 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.72 0.3 -0.34
117 AT4G24000 cellulose synthase like G2 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G2, cellulose
synthase like G2		 -0.72 0.31 -0.31
118 AT5G25810 Integrase-type DNA-binding superfamily protein TINY 0.72 0.31 -0.33
119 AT4G31460 Ribosomal L28 family 0.72 0.32 -0.34
120 AT4G13210 Pectin lyase-like superfamily protein 0.72 0.32 -0.31
121 AT3G63440 cytokinin oxidase/dehydrogenase 6 CYTOKININ OXIDASE 6, ATCKX7,
cytokinin oxidase/dehydrogenase 6		 0.71 0.33 -0.32
122 AT3G56900 Transducin/WD40 repeat-like superfamily protein 0.71 0.33 -0.31
123 AT5G10240 asparagine synthetase 3 asparagine synthetase 3 0.71 0.32 -0.32
124 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein 0.71 0.31 -0.3
125 AT4G26760 microtubule-associated protein 65-2 microtubule-associated protein
65-2		 0.71 0.31 -0.33
126 AT2G39870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G55690.1); Has 73 Blast hits
to 71 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 2; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.33 -0.29
127 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 0.7 0.32 -0.32
128 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 0.7 0.34 -0.33
129 AT1G78120 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 12 0.7 0.3 -0.33
130 AT3G63240 DNAse I-like superfamily protein 0.7 0.3 -0.31
131 AT2G02470 alfin-like 6 alfin-like 6 0.7 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine 0.78 0.46 -0.43 C0050