AT1G04190 : tetratricopeptide repeat 3
Query Information
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AGICode AT1G04190
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 1 0.34 -0.29
2 AT3G07110 Ribosomal protein L13 family protein 0.9 0.33 -0.32
3 AT2G19730 Ribosomal L28e protein family 0.9 0.3 -0.35
4 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.89 0.32 -0.32
5 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.89 0.33 -0.34
6 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.88 0.31 -0.32
7 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.88 0.32 -0.32
8 AT3G11250 Ribosomal protein L10 family protein 0.88 0.32 -0.32
9 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 0.88 0.34 -0.3
10 AT3G03960 TCP-1/cpn60 chaperonin family protein 0.88 0.34 -0.31
11 AT3G60770 Ribosomal protein S13/S15 0.87 0.34 -0.31
12 AT4G14320 Zinc-binding ribosomal protein family protein 0.87 0.3 -0.32
13 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 0.87 0.3 -0.33
14 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.33 -0.31
15 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.86 0.31 -0.34
16 AT3G16780 Ribosomal protein L19e family protein 0.86 0.32 -0.32
17 AT1G20950 Phosphofructokinase family protein 0.86 0.31 -0.3
18 AT3G06610 DNA-binding enhancer protein-related 0.86 0.32 -0.31
19 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.86 0.32 -0.33
20 AT4G16720 Ribosomal protein L23/L15e family protein 0.85 0.32 -0.34
21 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 0.85 0.31 -0.31
22 AT2G27720 60S acidic ribosomal protein family 0.85 0.31 -0.33
23 AT1G07070 Ribosomal protein L35Ae family protein 0.85 0.3 -0.3
24 AT2G20450 Ribosomal protein L14 0.85 0.31 -0.32
25 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 0.85 0.31 -0.34
26 AT5G64670 Ribosomal protein L18e/L15 superfamily protein 0.85 0.3 -0.33
27 AT1G73980 Phosphoribulokinase / Uridine kinase family -0.84 0.33 -0.32
28 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein -0.84 0.3 -0.32
29 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.84 0.31 -0.33
30 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 0.84 0.3 -0.31
31 AT2G35605 SWIB/MDM2 domain superfamily protein 0.84 0.32 -0.29
32 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 0.83 0.33 -0.31
33 AT1G08230 Transmembrane amino acid transporter family protein ATGAT1, L-GAMMA-AMINOBUTYRIC ACID
TRANSPORTER 1		 -0.83 0.31 -0.31
34 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.83 0.31 -0.32
35 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 0.83 0.32 -0.33
36 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.83 0.32 -0.32
37 AT1G77750 Ribosomal protein S13/S18 family 0.83 0.32 -0.33
38 AT1G04340 HR-like lesion-inducing protein-related 0.82 0.31 -0.32
39 AT4G25890 60S acidic ribosomal protein family 0.82 0.33 -0.32
40 AT2G41840 Ribosomal protein S5 family protein 0.82 0.3 -0.32
41 AT3G25620 ABC-2 type transporter family protein ATP-binding cassette G21 -0.82 0.31 -0.31
42 AT3G02080 Ribosomal protein S19e family protein 0.82 0.31 -0.3
43 AT3G10550 Myotubularin-like phosphatases II superfamily Arabidopsis thaliana myotubularin
1, myotubularin 1		 -0.82 0.3 -0.31
44 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 0.82 0.32 -0.29
45 AT1G04680 Pectin lyase-like superfamily protein 0.81 0.32 -0.32
46 AT5G41970 Metal-dependent protein hydrolase 0.81 0.33 -0.31
47 AT3G57000 nucleolar essential protein-related 0.81 0.33 -0.31
48 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.81 0.33 -0.31
49 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.81 0.31 -0.29
50 AT3G44590 60S acidic ribosomal protein family 0.81 0.31 -0.32
51 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein 0.81 0.32 -0.33
52 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.81 0.31 -0.32
53 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 0.81 0.32 -0.33
54 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.81 0.32 -0.31
55 AT5G64100 Peroxidase superfamily protein 0.81 0.3 -0.33
56 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 0.81 0.31 -0.34
57 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.81 0.31 -0.31
58 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 -0.8 0.33 -0.32
59 AT5G15520 Ribosomal protein S19e family protein 0.8 0.31 -0.3
60 AT5G61840 Exostosin family protein GUT1 0.8 0.31 -0.31
61 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.8 0.33 -0.31
62 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 0.8 0.33 -0.31
63 AT3G53960 Major facilitator superfamily protein -0.8 0.32 -0.32
64 AT5G22850 Eukaryotic aspartyl protease family protein -0.8 0.3 -0.32
65 AT1G42470 Patched family protein -0.8 0.31 -0.3
66 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.8 0.31 -0.32
67 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.8 0.3 -0.31
68 AT1G05210 Transmembrane protein 97, predicted 0.8 0.29 -0.32
69 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.8 0.32 -0.32
70 AT5G02470 Transcription factor DP DPA 0.79 0.31 -0.32
71 AT5G05570 transducin family protein / WD-40 repeat family protein -0.79 0.3 -0.32
72 AT1G52300 Zinc-binding ribosomal protein family protein 0.79 0.32 -0.31
73 AT3G24740 Protein of unknown function (DUF1644) -0.79 0.33 -0.31
74 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.33 -0.33
75 AT3G51730 saposin B domain-containing protein -0.79 0.31 -0.34
76 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.79 0.31 -0.32
77 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 0.79 0.34 -0.29
78 AT4G23290 cysteine-rich RLK (RECEPTOR-like protein kinase) 21 cysteine-rich RLK (RECEPTOR-like
protein kinase) 21		 0.79 0.33 -0.33
79 AT5G53350 CLP protease regulatory subunit X CLP protease regulatory subunit X -0.79 0.32 -0.29
80 AT1G34130 staurosporin and temperature sensitive 3-like b staurosporin and temperature
sensitive 3-like b		 0.79 0.31 -0.31
81 AT5G66920 SKU5 similar 17 SKU5 similar 17 0.79 0.32 -0.32
82 AT3G26380 Melibiase family protein -0.79 0.31 -0.32
83 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.79 0.3 -0.32
84 AT2G32380 Transmembrane protein 97, predicted 0.79 0.33 -0.31
85 AT3G56620 nodulin MtN21 /EamA-like transporter family protein -0.79 0.33 -0.28
86 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein -0.78 0.31 -0.3
87 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 -0.78 0.31 -0.31
88 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.78 0.34 -0.31
89 AT5G35560 DENN (AEX-3) domain-containing protein -0.78 0.31 -0.31
90 AT3G16940 calmodulin binding;transcription regulators -0.77 0.34 -0.32
91 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.33 -0.33
92 AT1G68820 Transmembrane Fragile-X-F-associated protein -0.77 0.32 -0.32
93 AT1G05940 cationic amino acid transporter 9 cationic amino acid transporter 9 -0.77 0.33 -0.31
94 AT4G38350 Patched family protein -0.77 0.29 -0.32
95 AT1G03080 kinase interacting (KIP1-like) family protein -0.77 0.31 -0.32
96 AT3G26100 Regulator of chromosome condensation (RCC1) family protein -0.77 0.33 -0.31
97 AT5G11840 Protein of unknown function (DUF1230) -0.77 0.33 -0.31
98 AT5G10650 RING/U-box superfamily protein -0.77 0.34 -0.32
99 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 -0.77 0.31 -0.32
100 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.77 0.32 -0.31
101 AT2G44130 Galactose oxidase/kelch repeat superfamily protein -0.77 0.31 -0.33
102 AT1G17550 homology to ABI2 homology to ABI2 -0.76 0.32 -0.31
103 AT1G05840 Eukaryotic aspartyl protease family protein -0.76 0.31 -0.32
104 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.76 0.32 -0.31
105 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.76 0.32 -0.29
106 AT4G20930 6-phosphogluconate dehydrogenase family protein -0.76 0.31 -0.31
107 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1		 -0.75 0.31 -0.29
108 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 -0.75 0.32 -0.31
109 AT5G52410 CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23890.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.75 0.34 -0.31
110 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 -0.75 0.3 -0.32
111 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.75 0.31 -0.34
112 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.74 0.31 -0.33
113 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 -0.74 0.29 -0.33
114 AT4G13550 triglyceride lipases;triglyceride lipases -0.74 0.33 -0.3
115 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 -0.74 0.31 -0.32
116 AT1G04830 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.74 0.32 -0.31
117 AT5G65620 Zincin-like metalloproteases family protein -0.74 0.32 -0.32
118 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F		 -0.74 0.33 -0.3
119 AT4G11370 RING-H2 finger A1A RING-H2 finger A1A -0.74 0.3 -0.31
120 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 -0.74 0.33 -0.31
121 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 -0.74 0.32 -0.3
122 AT3G50080 VIER F-box proteine 2 VIER F-box proteine 2 -0.73 0.3 -0.32
123 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog -0.73 0.28 -0.32
124 AT4G08500 MAPK/ERK kinase kinase 1 ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK
kinase kinase 1		 -0.73 0.32 -0.3
125 AT3G61710 AUTOPHAGY 6 ATATG6, AtBECLIN1, AUTOPHAGY 6,
BECLIN1		 -0.73 0.3 -0.33
126 AT3G27610 Nucleotidylyl transferase superfamily protein -0.73 0.32 -0.32
127 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.73 0.32 -0.33
128 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.73 0.31 -0.3
129 AT3G11880 Protein of unknown function DUF2359, transmembrane -0.72 0.31 -0.32
130 AT1G17145 RING/U-box superfamily protein -0.72 0.31 -0.31
131 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.72 0.31 -0.3
132 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 -0.72 0.32 -0.32
133 AT5G24800 basic leucine zipper 9 ARABIDOPSIS THALIANA BASIC LEUCINE
ZIPPER 9, basic leucine zipper 9,
BASIC LEUCINE ZIPPER O2 HOMOLOG 2		 -0.72 0.32 -0.34
134 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein -0.72 0.33 -0.32
135 AT2G20920 Protein of unknown function (DUF3353) -0.72 0.33 -0.32
136 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC -0.72 0.3 -0.32
137 AT5G58690 phosphatidylinositol-speciwc phospholipase C5 ATPLC5,
phosphatidylinositol-speciwc
phospholipase C5		 -0.72 0.34 -0.3
138 AT3G26000 Ribonuclease inhibitor -0.72 0.29 -0.31
139 AT4G39850 peroxisomal ABC transporter 1 ATP-binding cassette D1, acetate
non-utilizing 2, Arabidopsis
thaliana ATP-binding cassette D1,
COMATOSE, PEROXISOME DEFECTIVE 3,
peroxisomal ABC transporter 1		 -0.72 0.31 -0.31
140 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 -0.72 0.33 -0.33
141 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 -0.72 0.34 -0.29
142 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 -0.71 0.31 -0.31
143 AT1G04970 lipid-binding serum glycoprotein family protein -0.71 0.3 -0.33
144 AT1G58200 MSCS-like 3 MSCS-like 3 -0.71 0.3 -0.32
145 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 -0.71 0.3 -0.33