AT1G09850 : xylem bark cysteine peptidase 3
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G09850
Description xylem bark cysteine peptidase 3
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G09850 xylem bark cysteine peptidase 3 xylem bark cysteine peptidase 3 1 0.31 -0.31
2 AT4G36640 Sec14p-like phosphatidylinositol transfer family protein 0.87 0.32 -0.3
3 AT5G36220 cytochrome p450 81d1 cytochrome P450, family 81,
subfamily D, polypeptide 1,
CYTOCHROME P450 91A1
0.85 0.31 -0.31
4 AT3G02360 6-phosphogluconate dehydrogenase family protein 0.85 0.33 -0.31
5 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.85 0.31 -0.31
6 AT4G26910 Dihydrolipoamide succinyltransferase 0.85 0.32 -0.33
7 AT2G17130 isocitrate dehydrogenase subunit 2 isocitrate dehydrogenase II,
isocitrate dehydrogenase subunit 2
0.85 0.3 -0.33
8 AT1G11600 cytochrome P450, family 77, subfamily B, polypeptide 1 cytochrome P450, family 77,
subfamily B, polypeptide 1
-0.85 0.31 -0.34
9 AT1G70810 Calcium-dependent lipid-binding (CaLB domain) family
protein
0.85 0.3 -0.31
10 AT5G26910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits
to 684 proteins in 162 species: Archae - 4; Bacteria - 497;
Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0;
Other Eukaryotes - 408 (source: NCBI BLink).
-0.85 0.32 -0.3
11 AT5G17380 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein
0.84 0.32 -0.32
12 AT4G35260 isocitrate dehydrogenase 1 isocitrate dehydrogenase I,
isocitrate dehydrogenase 1
0.84 0.31 -0.32
13 AT5G05730 anthranilate synthase alpha subunit 1 A-METHYL TRYPTOPHAN RESISTANT 1,
anthranilate synthase alpha
subunit 1, JASMONATE-INDUCED
DEFECTIVE LATERAL ROOT 1,
TRYPTOPHAN BIOSYNTHESIS 5, WEAK
ETHYLENE INSENSITIVE 2
0.84 0.32 -0.31
14 AT2G37110 PLAC8 family protein 0.83 0.33 -0.3
15 AT4G38540 FAD/NAD(P)-binding oxidoreductase family protein 0.83 0.31 -0.3
16 AT5G05600 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
0.83 0.31 -0.31
17 AT5G25590 Protein of unknown function (DUF630 and DUF632) -0.83 0.31 -0.33
18 AT1G14330 Galactose oxidase/kelch repeat superfamily protein 0.83 0.31 -0.32
19 AT4G35630 phosphoserine aminotransferase phosphoserine aminotransferase 0.83 0.32 -0.31
20 AT1G16670 Protein kinase superfamily protein 0.83 0.3 -0.32
21 AT3G54640 tryptophan synthase alpha chain TRYPTOPHAN-REQUIRING 3, tryptophan
synthase alpha chain
0.83 0.31 -0.32
22 AT2G38240 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
0.83 0.33 -0.34
23 AT2G04400 Aldolase-type TIM barrel family protein 0.83 0.31 -0.31
24 AT5G33290 xylogalacturonan deficient 1 xylogalacturonan deficient 1 0.83 0.32 -0.31
25 AT1G21900 emp24/gp25L/p24 family/GOLD family protein 0.82 0.31 -0.32
26 AT1G65820 microsomal glutathione s-transferase, putative 0.82 0.32 -0.31
27 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 0.82 0.32 -0.32
28 AT2G22780 peroxisomal NAD-malate dehydrogenase 1 peroxisomal NAD-malate
dehydrogenase 1
0.82 0.33 -0.32
29 AT1G70700 TIFY domain/Divergent CCT motif family protein JASMONATE-ZIM-DOMAIN PROTEIN 9,
TIFY7
0.82 0.32 -0.33
30 AT5G63680 Pyruvate kinase family protein 0.82 0.32 -0.31
31 AT3G27890 NADPH:quinone oxidoreductase NADPH:quinone oxidoreductase 0.82 0.29 -0.34
32 AT3G45130 lanosterol synthase 1 lanosterol synthase 1 0.81 0.31 -0.32
33 AT5G61010 exocyst subunit exo70 family protein E2 exocyst subunit exo70 family
protein E2, exocyst subunit exo70
family protein E2
0.81 0.31 -0.31
34 AT2G01650 plant UBX domain-containing protein 2 plant UBX domain-containing
protein 2
0.81 0.33 -0.32
35 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1
0.81 0.32 -0.34
36 AT5G03630 Pyridine nucleotide-disulphide oxidoreductase family
protein
ATMDAR2 0.81 0.32 -0.31
37 AT5G07440 glutamate dehydrogenase 2 glutamate dehydrogenase 2 0.81 0.3 -0.31
38 AT5G27380 glutathione synthetase 2 glutathione synthetase 2, GSHB 0.81 0.3 -0.32
39 AT5G19550 aspartate aminotransferase 2 ASPARTATE AMINOTRANSFERASE 2,
aspartate aminotransferase 2
0.81 0.34 -0.32
40 AT4G23010 UDP-galactose transporter 2 ATUTR2, UDP-galactose transporter
2
0.81 0.31 -0.33
41 AT4G35830 aconitase 1 aconitase 1 0.8 0.3 -0.32
42 AT2G01420 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 4,
PIN-FORMED 4
-0.8 0.31 -0.32
43 AT2G24200 Cytosol aminopeptidase family protein 0.8 0.31 -0.31
44 AT5G26850 Uncharacterized protein -0.8 0.33 -0.33
45 AT5G40740 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.8 0.32 -0.31
46 AT2G32660 receptor like protein 22 receptor like protein 22, receptor
like protein 22
0.8 0.31 -0.3
47 AT1G72470 exocyst subunit exo70 family protein D1 exocyst subunit exo70 family
protein D1, exocyst subunit exo70
family protein D1
0.8 0.32 -0.32
48 AT3G28930 AIG2-like (avirulence induced gene) family protein AVRRPT2-INDUCED GENE 2 0.8 0.31 -0.31
49 AT2G27690 cytochrome P450, family 94, subfamily C, polypeptide 1 cytochrome P450, family 94,
subfamily C, polypeptide 1
0.79 0.31 -0.31
50 AT3G17840 receptor-like kinase 902 receptor-like kinase 902 -0.79 0.31 -0.31
51 AT2G03980 GDSL-like Lipase/Acylhydrolase superfamily protein 0.79 0.32 -0.32
52 AT3G59760 O-acetylserine (thiol) lyase isoform C ARABIDOPSIS THALIANA
CYSTEINSYNTHASE-C, O-acetylserine
(thiol) lyase isoform C
0.79 0.34 -0.31
53 AT3G26830 Cytochrome P450 superfamily protein CYP71B15, PHYTOALEXIN DEFICIENT 3 0.79 0.34 -0.31
54 AT4G26530 Aldolase superfamily protein -0.79 0.29 -0.33
55 AT1G72280 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum
oxidoreductins 1, endoplasmic
reticulum oxidoreductins 1
0.79 0.32 -0.32
56 AT3G55970 jasmonate-regulated gene 21 ATJRG21, jasmonate-regulated gene
21
0.79 0.33 -0.29
57 AT5G54860 Major facilitator superfamily protein 0.79 0.29 -0.31
58 AT1G65230 Uncharacterized conserved protein (DUF2358) -0.78 0.33 -0.32
59 AT3G54150 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
0.78 0.3 -0.31
60 AT2G24850 tyrosine aminotransferase 3 TYROSINE AMINOTRANSFERASE,
tyrosine aminotransferase 3
0.78 0.32 -0.31
61 AT1G33260 Protein kinase superfamily protein 0.78 0.31 -0.3
62 AT5G55200 Co-chaperone GrpE family protein mitochondrial GrpE 1 0.78 0.35 -0.31
63 AT1G17080 Ribosomal protein L18ae family 0.78 0.32 -0.32
64 AT2G06050 oxophytodienoate-reductase 3 AtOPR3, DELAYED DEHISCENCE 1,
oxophytodienoate-reductase 3
0.78 0.32 -0.29
65 AT5G49960 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1012 (InterPro:IPR010420); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF1012) (TAIR:AT5G02940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).
-0.78 0.32 -0.3
66 AT1G64900 cytochrome P450, family 89, subfamily A, polypeptide 2 CYP89, cytochrome P450, family 89,
subfamily A, polypeptide 2
0.78 0.32 -0.34
67 AT1G33030 O-methyltransferase family protein 0.78 0.31 -0.33
68 AT3G28450 Leucine-rich repeat protein kinase family protein 0.78 0.32 -0.32
69 AT5G25930 Protein kinase family protein with leucine-rich repeat
domain
0.78 0.33 -0.32
70 AT5G08300 Succinyl-CoA ligase, alpha subunit 0.78 0.3 -0.31
71 AT2G36050 ovate family protein 15 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 15, ovate family protein
15
-0.78 0.32 -0.3
72 AT5G02160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 121
Blast hits to 121 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
-0.77 0.29 -0.31
73 AT2G37250 adenosine kinase adenosine kinase, ATPADK1 0.77 0.32 -0.3
74 AT4G34180 Cyclase family protein 0.77 0.3 -0.28
75 AT3G11840 plant U-box 24 plant U-box 24 0.77 0.32 -0.3
76 AT5G11670 NADP-malic enzyme 2 Arabidopsis thaliana NADP-malic
enzyme 2, NADP-malic enzyme 2
0.77 0.31 -0.32
77 AT1G72450 jasmonate-zim-domain protein 6 jasmonate-zim-domain protein 6,
TIFY DOMAIN PROTEIN 11B
0.77 0.32 -0.31
78 AT4G34200 D-3-phosphoglycerate dehydrogenase embryo sac development arrest 9 0.77 0.33 -0.33
79 AT5G66120 3-dehydroquinate synthase, putative 0.77 0.33 -0.31
80 AT1G06620 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
0.77 0.3 -0.32
81 AT2G27040 Argonaute family protein ARGONAUTE 4, OVEREXPRESSOR OF
CATIONIC PEROXIDASE 11
-0.77 0.32 -0.3
82 AT1G16210 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1014 (InterPro:IPR010422); Has 16107
Blast hits to 8386 proteins in 1107 species: Archae - 26;
Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants -
526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI
BLink).
0.77 0.31 -0.3
83 AT2G38040 acetyl Co-enzyme a carboxylase carboxyltransferase alpha
subunit
acetyl Co-enzyme a carboxylase
carboxyltransferase alpha subunit
-0.77 0.32 -0.29
84 AT3G09010 Protein kinase superfamily protein 0.77 0.29 -0.33
85 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein
0.77 0.32 -0.3
86 AT4G21680 NITRATE TRANSPORTER 1.8 NITRATE TRANSPORTER 1.8 0.76 0.31 -0.3
87 AT5G42890 sterol carrier protein 2 STEROL CARRIER PROTEIN 2, sterol
carrier protein 2
0.76 0.32 -0.33
88 AT1G76640 Calcium-binding EF-hand family protein 0.76 0.3 -0.33
89 AT3G51790 transmembrane protein G1P-related 1 transmembrane protein G1P-related
1, transmembrane protein
G1P-related 1
0.76 0.34 -0.32
90 AT1G18390 Protein kinase superfamily protein 0.76 0.32 -0.31
91 AT5G03290 isocitrate dehydrogenase V isocitrate dehydrogenase V 0.76 0.32 -0.33
92 AT3G19260 LAG1 homologue 2 LONGEVITY ASSURANCE GENE1 HOMOLOG
2, LAG1 homologue 2
0.76 0.34 -0.31
93 AT3G60540 Preprotein translocase Sec, Sec61-beta subunit protein 0.76 0.31 -0.33
94 AT1G07240 UDP-glucosyl transferase 71C5 UDP-glucosyl transferase 71C5 0.76 0.32 -0.31
95 AT1G14990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
0.76 0.32 -0.3
96 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B
0.76 0.32 -0.31
97 AT1G20870 HSP20-like chaperones superfamily protein -0.76 0.32 -0.32
98 AT1G18390 Protein kinase superfamily protein 0.76 0.32 -0.32
99 AT2G35310 Transcriptional factor B3 family protein -0.76 0.32 -0.32
100 AT1G70760 inorganic carbon transport protein-related CHLORORESPIRATORY REDUCTION 23,
NADH dehydrogenase-like complex L
-0.76 0.29 -0.32
101 AT1G03740 Protein kinase superfamily protein 0.76 0.33 -0.33
102 AT1G16220 Protein phosphatase 2C family protein -0.75 0.32 -0.31
103 AT2G35800 mitochondrial substrate carrier family protein S-adenosyl methionine
transporter-like
-0.75 0.32 -0.31
104 AT5G63700 zinc ion binding;DNA binding -0.75 0.33 -0.31
105 AT3G01500 carbonic anhydrase 1 BETA CARBONIC ANHYDRASE 1,
ARABIDOPSIS THALIANA SALICYLIC
ACID-BINDING PROTEIN 3, carbonic
anhydrase 1, SALICYLIC
ACID-BINDING PROTEIN 3
-0.75 0.3 -0.34
106 AT5G13290 Protein kinase superfamily protein CORYNE, SUPPRESSOR OF LLP1 2 -0.75 0.35 -0.31
107 AT3G61610 Galactose mutarotase-like superfamily protein -0.74 0.34 -0.32
108 AT2G22990 sinapoylglucose 1 SERINE CARBOXYPEPTIDASE-LIKE 8,
sinapoylglucose 1
-0.74 0.33 -0.32
109 AT1G16720 high chlorophyll fluorescence phenotype 173 high chlorophyll fluorescence
phenotype 173
-0.74 0.29 -0.32
110 AT3G51290 Protein of unknown function (DUF630) ;Protein of unknown
function (DUF632)
-0.74 0.31 -0.32
111 AT5G47610 RING/U-box superfamily protein -0.74 0.32 -0.33
112 AT4G33010 glycine decarboxylase P-protein 1 glycine decarboxylase P-protein 1,
glycine decarboxylase P-protein 1
-0.74 0.32 -0.31
113 AT1G12860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
INDUCER OF CBF EXPRESSION 2,
SCREAM 2
-0.74 0.31 -0.32
114 AT2G41890 curculin-like (mannose-binding) lectin family protein / PAN
domain-containing protein
-0.74 0.33 -0.31
115 AT2G39560 Putative membrane lipoprotein -0.73 0.32 -0.32
116 AT2G22670 indoleacetic acid-induced protein 8 indoleacetic acid-induced protein
8
-0.73 0.32 -0.31
117 AT5G55540 tornado 1 LOPPED 1, TORNADO 1 -0.73 0.31 -0.31
118 AT3G05470 Actin-binding FH2 (formin homology 2) family protein -0.73 0.3 -0.32
119 AT5G13980 Glycosyl hydrolase family 38 protein -0.73 0.31 -0.33
120 AT1G27120 Galactosyltransferase family protein -0.73 0.34 -0.33
121 AT4G22890 PGR5-LIKE A PGR5-LIKE A -0.73 0.29 -0.32
122 AT4G00755 F-box family protein -0.73 0.29 -0.3
123 AT1G72820 Mitochondrial substrate carrier family protein -0.73 0.3 -0.31
124 AT4G04350 tRNA synthetase class I (I, L, M and V) family protein EMBRYO DEFECTIVE 2369 -0.73 0.33 -0.32
125 AT2G05790 O-Glycosyl hydrolases family 17 protein -0.73 0.29 -0.34
126 AT3G20820 Leucine-rich repeat (LRR) family protein -0.73 0.32 -0.33
127 AT2G39470 PsbP-like protein 2 Photosynthetic NDH subcomplex L
1, PsbP-like protein 2
-0.73 0.32 -0.32
128 AT3G62550 Adenine nucleotide alpha hydrolases-like superfamily
protein
-0.73 0.31 -0.3
129 AT1G67040 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.73 0.31 -0.31
130 AT3G22420 with no lysine (K) kinase 2 ARABIDOPSIS THALIANA WITH NO K 2,
with no lysine (K) kinase 2, ZIK3
-0.72 0.3 -0.31
131 AT1G32520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 143 Blast hits to 142
proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa -
39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
48 (source: NCBI BLink).
-0.72 0.3 -0.32
132 AT1G65010 Plant protein of unknown function (DUF827) -0.72 0.31 -0.32
133 AT5G65460 kinesin like protein for actin based chloroplast movement 2 kinesin like protein for actin
based chloroplast movement 2,
kinesin CDKA ;1 associated 2
-0.72 0.34 -0.3
134 AT1G34355 forkhead-associated (FHA) domain-containing protein PARALLEL SPINDLE 1, PARALLEL
SPINDLE 1
-0.72 0.34 -0.3
135 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5
-0.72 0.3 -0.3
136 AT5G60150 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
-0.72 0.29 -0.29
137 AT5G65700 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 1 -0.71 0.34 -0.31
138 AT4G38570 probable CDP-diacylglycerol--inositol
3-phosphatidyltransferase 2
probable
CDP-diacylglycerol--inositol
3-phosphatidyltransferase 2
-0.71 0.31 -0.31
139 AT4G26555 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein
-0.71 0.31 -0.33
140 AT1G53450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14830.2); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.71 0.3 -0.32
141 AT5G15780 Pollen Ole e 1 allergen and extensin family protein -0.71 0.3 -0.35
142 AT5G37010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259
proteins in 486 species: Archae - 7; Bacteria - 485;
Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50;
Other Eukaryotes - 1741 (source: NCBI BLink).
-0.71 0.33 -0.3
143 AT4G16340 guanyl-nucleotide exchange factors;GTPase binding;GTP
binding
SPIKE1 -0.7 0.33 -0.32
144 AT3G04450 Homeodomain-like superfamily protein -0.7 0.32 -0.31
145 AT4G23800 HMG (high mobility group) box protein 3xHigh Mobility Group-box2 -0.7 0.3 -0.3
146 AT2G22980 serine carboxypeptidase-like 13 serine carboxypeptidase-like 13 -0.7 0.34 -0.31
147 AT4G03270 Cyclin D6;1 Cyclin D6;1 -0.7 0.32 -0.32
148 AT1G04550 AUX/IAA transcriptional regulator family protein BODENLOS, indole-3-acetic acid
inducible 12
-0.7 0.31 -0.3
149 AT3G44610 Protein kinase superfamily protein -0.7 0.32 -0.32
150 AT3G57190 peptide chain release factor, putative peptide chain release factor 3 -0.7 0.3 -0.32
151 AT3G54350 Forkhead-associated (FHA) domain-containing protein embryo defective 1967 -0.7 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
152 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - -0.73 0.46 -0.45