AT1G62250 : -
Query Information
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AGICode AT1G62250
Description unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G62250 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 15 growth stages; Has
30 Blast hits to 30 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 1 0.31 -0.32
2 AT5G27730 Protein of unknown function (DUF1624) 0.85 0.32 -0.3
3 AT1G26150 proline-rich extensin-like receptor kinase 10 proline-rich extensin-like
receptor kinase 10, proline-rich
extensin-like receptor kinase 10		 0.84 0.31 -0.33
4 AT1G72030 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.8 0.32 -0.31
5 AT2G35790 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1301 (InterPro:IPR009724); Has 116
Blast hits to 116 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses
- 0; Other Eukaryotes - 8 (source: NCBI BLink).		 -0.79 0.32 -0.33
6 AT3G46590 TRF-like 1 ATTRP2, TRF-like 1, TRP2 0.78 0.31 -0.31
7 AT5G47800 Phototropic-responsive NPH3 family protein 0.78 0.31 -0.31
8 AT1G19715 Mannose-binding lectin superfamily protein 0.77 0.32 -0.33
9 AT5G25630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.34 -0.31
10 AT2G38460 iron regulated 1 ARABIDOPSIS THALIANA
IRON-REGULATED PROTEIN 1,
FERROPORTIN 1, iron regulated 1		 0.77 0.31 -0.33
11 AT5G19500 Tryptophan/tyrosine permease 0.77 0.32 -0.31
12 AT1G65900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to
306 proteins in 119 species: Archae - 19; Bacteria - 238;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.77 0.32 -0.32
13 AT1G76110 HMG (high mobility group) box protein with ARID/BRIGHT
DNA-binding domain		 0.76 0.34 -0.32
14 AT5G19550 aspartate aminotransferase 2 ASPARTATE AMINOTRANSFERASE 2,
aspartate aminotransferase 2		 -0.76 0.34 -0.32
15 AT1G53460 BEST Arabidopsis thaliana protein match is: Ran BP2/NZF
zinc finger-like superfamily protein (TAIR:AT1G70650.2);
Has 485 Blast hits to 413 proteins in 88 species: Archae -
11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101;
Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink).		 -0.75 0.31 -0.31
16 AT3G19720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ACCUMULATION AND REPLICATION OF
CHLOROPLAST 5, Dynamin related
protein 5B		 0.75 0.32 -0.31
17 AT3G02830 zinc finger protein 1 zinc finger protein 1 0.75 0.34 -0.33
18 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 0.74 0.32 -0.34
19 AT3G01210 RNA-binding (RRM/RBD/RNP motifs) family protein 0.74 0.32 -0.3
20 AT2G31390 pfkB-like carbohydrate kinase family protein -0.74 0.31 -0.3
21 AT3G01140 myb domain protein 106 myb domain protein 106, myb domain
protein 106, NOECK		 0.73 0.31 -0.3
22 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 -0.73 0.33 -0.34
23 AT1G60590 Pectin lyase-like superfamily protein 0.73 0.31 -0.31
24 AT1G62730 Terpenoid synthases superfamily protein -0.73 0.3 -0.3
25 AT3G51950 Zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 0.73 0.32 -0.31
26 AT2G16060 hemoglobin 1 hemoglobin 1, ARATH GLB1, ATGLB1,
CLASS I HEMOGLOBIN, hemoglobin 1,
NSHB1		 -0.73 0.3 -0.31
27 AT3G18500 DNAse I-like superfamily protein 0.73 0.31 -0.31
28 AT2G01400 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.28 -0.31
29 AT1G30580 GTP binding -0.72 0.31 -0.32
30 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 -0.72 0.31 -0.3
31 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 0.72 0.31 -0.3
32 AT3G03050 cellulose synthase-like D3 CELLULOSE SYNTHASE LIKE D3,
cellulose synthase-like D3, KOJAK,
ROOT HAIR DEFECTIVE 7		 -0.72 0.3 -0.33
33 AT2G34080 Cysteine proteinases superfamily protein -0.72 0.32 -0.32
34 AT3G44960 unknown protein; Has 34 Blast hits to 34 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.33 -0.32
35 AT1G52870 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.72 0.29 -0.32
36 AT3G28080 nodulin MtN21 /EamA-like transporter family protein 0.72 0.31 -0.3
37 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 0.72 0.33 -0.3
38 AT4G37560 Acetamidase/Formamidase family protein 0.72 0.33 -0.31
39 AT1G11410 S-locus lectin protein kinase family protein 0.71 0.32 -0.32
40 AT5G03290 isocitrate dehydrogenase V isocitrate dehydrogenase V -0.71 0.33 -0.31
41 AT2G15020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64190.1); Has 72 Blast hits
to 72 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.34 -0.31
42 AT4G02930 GTP binding Elongation factor Tu family protein -0.71 0.31 -0.3
43 AT2G31060 elongation factor family protein EMBRYO DEFECTIVE 2785 -0.71 0.33 -0.29
44 AT1G05690 BTB and TAZ domain protein 3 BTB and TAZ domain protein 3 0.7 0.3 -0.33
45 AT4G22930 pyrimidin 4 DIHYDROOROTASE, pyrimidin 4 -0.7 0.32 -0.31
46 AT5G13780 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.7 0.31 -0.3
47 AT3G56080 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.31 -0.31
48 AT4G01850 S-adenosylmethionine synthetase 2 AtSAM2, MAT2, S-adenosylmethionine
synthetase 2, S-ADENOSYLMETHIONINE
SYNTHETASE 2		 -0.7 0.32 -0.32
49 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 -0.69 0.32 -0.31
50 AT1G73180 Eukaryotic translation initiation factor eIF2A family
protein		 -0.69 0.31 -0.3
51 AT1G36050 Endoplasmic reticulum vesicle transporter protein -0.69 0.31 -0.32
52 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.3 -0.32
53 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.69 0.29 -0.35
54 AT5G38630 cytochrome B561-1 cytochrome B561-1, cytochrome
B561-1		 -0.69 0.31 -0.32
55 AT3G53570 FUS3-complementing gene 1 FUS3-complementing gene 1, AME2,
FUS3-complementing gene 1		 0.69 0.32 -0.31
56 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein -0.69 0.31 -0.33
57 AT4G31340 myosin heavy chain-related -0.69 0.33 -0.31
58 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 -0.69 0.35 -0.31
59 AT5G04870 calcium dependent protein kinase 1 ATCPK1, calcium dependent protein
kinase 1		 -0.69 0.31 -0.32
60 AT1G70430 Protein kinase superfamily protein 0.69 0.32 -0.32
61 AT2G24280 alpha/beta-Hydrolases superfamily protein 0.69 0.32 -0.3
62 AT4G17060 FRIGIDA interacting protein 2 FRIGIDA interacting protein 2 -0.68 0.32 -0.31
63 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 0.68 0.32 -0.31
64 AT2G47550 Plant invertase/pectin methylesterase inhibitor superfamily -0.68 0.31 -0.31
65 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.3 -0.32
66 AT1G67440 Minichromosome maintenance (MCM2/3/5) family protein embryo defective 1688 0.68 0.32 -0.33
67 AT5G25800 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.68 0.3 -0.31
68 AT2G23170 Auxin-responsive GH3 family protein GH3.3 -0.68 0.31 -0.33
69 AT3G44630 Disease resistance protein (TIR-NBS-LRR class) family 0.68 0.32 -0.32
70 AT5G67220 FMN-linked oxidoreductases superfamily protein -0.68 0.3 -0.31
71 AT4G36280 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.68 0.32 -0.31
72 AT4G34480 O-Glycosyl hydrolases family 17 protein 0.67 0.31 -0.32
73 AT4G14400 ankyrin repeat family protein ACCELERATED CELL DEATH 6 0.67 0.3 -0.31
74 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 -0.67 0.29 -0.32
75 AT1G71210 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.32 -0.32
76 AT3G54030 Protein kinase protein with tetratricopeptide repeat domain -0.67 0.31 -0.29
77 AT3G23150 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 ethylene response 2 -0.67 0.31 -0.32
78 AT5G38360 alpha/beta-Hydrolases superfamily protein 0.67 0.3 -0.31
79 AT3G56430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, vacuole; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in
196 species: Archae - 12; Bacteria - 170; Metazoa - 996;
Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes -
1428 (source: NCBI BLink).		 -0.67 0.3 -0.32
80 AT1G01840 unknown protein; Has 23 Blast hits to 23 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.31 -0.3
81 AT1G78020 Protein of unknown function (DUF581) 0.67 0.33 -0.3
82 AT1G76620 Protein of unknown function, DUF547 0.67 0.3 -0.32
83 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 -0.66 0.33 -0.31
84 AT1G20900 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 27, ESCAROLA, ORESARA 7		 -0.66 0.31 -0.32
85 AT1G66340 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 AtETR1, ETHYLENE INSENSITIVE 1,
ETHYLENE RESPONSE, ETHYLENE
RESPONSE 1		 -0.66 0.33 -0.29
86 AT2G03120 signal peptide peptidase signal peptide peptidase, signal
peptide peptidase		 -0.66 0.32 -0.32
87 AT5G11310 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.33 -0.34
88 AT1G52730 Transducin/WD40 repeat-like superfamily protein -0.66 0.31 -0.32
89 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.31 -0.29
90 AT1G77120 alcohol dehydrogenase 1 ALCOHOL DEHYDROGENASE, alcohol
dehydrogenase 1, ARABIDOPSIS
THALIANA ALCOHOL DEHYDROGENASE,
ATADH1		 -0.66 0.3 -0.31
91 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.65 0.32 -0.31
92 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 -0.65 0.31 -0.33
93 AT1G26270 Phosphatidylinositol 3- and 4-kinase family protein -0.65 0.31 -0.31
94 AT3G01720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in
23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 316; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 -0.65 0.33 -0.29
95 AT1G72360 Integrase-type DNA-binding superfamily protein AtERF73, ethylene response factor
73, HYPOXIA RESPONSIVE ERF
(ETHYLENE RESPONSE FACTOR) 1		 -0.65 0.3 -0.32
96 AT4G39390 nucleotide sugar transporter-KT 1 A. THALIANA NUCLEOTIDE SUGAR
TRANSPORTER-KT 1, nucleotide sugar
transporter-KT 1		 -0.65 0.33 -0.31
97 AT5G27395 Mitochondrial inner membrane translocase complex, subunit
Tim44-related protein		 -0.65 0.34 -0.32
98 AT2G34140 Dof-type zinc finger DNA-binding family protein -0.64 0.32 -0.31
99 AT1G14300 ARM repeat superfamily protein -0.64 0.31 -0.33
100 AT1G28210 DNAJ heat shock family protein ATJ1 -0.64 0.32 -0.3
101 AT5G02820 Spo11/DNA topoisomerase VI, subunit A protein BRASSINOSTEROID INSENSITIVE 5,
ROOT HAIRLESS 2		 -0.64 0.3 -0.3
102 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid -0.64 0.3 -0.32
103 AT2G40940 ethylene response sensor 1 ETHYLENE RESPONSE SENSOR, ethylene
response sensor 1		 -0.64 0.3 -0.31
104 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.34 -0.31
105 AT5G15090 voltage dependent anion channel 3 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 3, voltage
dependent anion channel 3		 -0.63 0.31 -0.31
106 AT4G31130 Protein of unknown function (DUF1218) -0.63 0.31 -0.34
107 AT3G15590 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.3 -0.32
108 AT5G19680 Leucine-rich repeat (LRR) family protein -0.63 0.29 -0.32
109 AT1G18690 Galactosyl transferase GMA12/MNN10 family protein -0.63 0.32 -0.33
110 AT1G19530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl,
root, flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 47 Blast hits to 47 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.32 -0.33