AT2G36740 : ATSWC2
Query Information
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AGICode AT2G36740
Description sequence-specific DNA binding transcription factors;DNA binding;DNA binding
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 1 0.3 -0.32
2 AT1G27520 Glycosyl hydrolase family 47 protein 0.7 0.32 -0.32
3 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.69 0.32 -0.31
4 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.68 0.3 -0.32
5 AT2G21940 shikimate kinase 1 ATSK1, shikimate kinase 1 0.68 0.28 -0.33
6 AT3G42300 transposable element gene 0.67 0.31 -0.33
7 AT5G58510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55060.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.31 -0.32
8 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 0.66 0.33 -0.32
9 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 0.66 0.33 -0.3
10 AT3G06990 Cysteine/Histidine-rich C1 domain family protein -0.65 0.31 -0.32
11 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.64 0.3 -0.31
12 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 0.64 0.32 -0.31
13 AT1G35663 transposable element gene -0.63 0.31 -0.32
14 AT1G52920 G protein coupled receptor G-PROTEIN COUPLED RECEPTOR 2, G
protein coupled receptor		 0.63 0.31 -0.31
15 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.33 -0.3
16 AT2G37840 Protein kinase superfamily protein 0.62 0.32 -0.31
17 AT5G13020 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML3, EMSY-like 3 0.61 0.31 -0.31
18 AT3G16090 RING/U-box superfamily protein homolog of yeast Hrd1, homolog of
yeast Hrd1		 0.6 0.29 -0.31
19 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.6 0.3 -0.34
20 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.59 0.3 -0.29
21 AT1G15830 unknown protein; Has 165982 Blast hits to 57214 proteins in
2459 species: Archae - 263; Bacteria - 44622; Metazoa -
55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other
Eukaryotes - 34550 (source: NCBI BLink).		 0.59 0.33 -0.32
22 AT1G61420 S-locus lectin protein kinase family protein 0.58 0.32 -0.31
23 AT1G05670 Pentatricopeptide repeat (PPR-like) superfamily protein 0.58 0.32 -0.31
24 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 0.58 0.32 -0.3
25 AT4G32440 Plant Tudor-like RNA-binding protein 0.58 0.3 -0.32
26 AT5G26610 D111/G-patch domain-containing protein 0.57 0.29 -0.32
27 AT4G26630 DEK domain-containing chromatin associated protein 0.57 0.3 -0.31
28 AT2G25740 ATP-dependent protease La (LON) domain protein 0.57 0.31 -0.31
29 AT2G42180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.57 0.34 -0.31
30 AT4G14385 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Histone H4
acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.57 0.33 -0.33
31 AT2G44240 Protein of Unknown Function (DUF239) -0.57 0.31 -0.3
32 AT5G58100 unknown protein; INVOLVED IN: pollen exine formation;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.56 0.3 -0.31
33 AT1G16650 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.56 0.31 -0.31
34 AT1G72350 MADS-box transcription factor family protein 0.56 0.3 -0.33
35 AT1G61720 NAD(P)-binding Rossmann-fold superfamily protein BANYULS 0.56 0.32 -0.3
36 AT2G47830 Cation efflux family protein 0.56 0.32 -0.31
37 AT1G53010 RING/U-box superfamily protein -0.56 0.34 -0.32
38 AT3G20650 mRNA capping enzyme family protein 0.56 0.31 -0.3
39 AT4G24630 DHHC-type zinc finger family protein 0.55 0.32 -0.32
40 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein -0.55 0.31 -0.31
41 AT3G47660 Regulator of chromosome condensation (RCC1) family protein -0.55 0.32 -0.31
42 AT4G19480 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.33 -0.31
43 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor -0.55 0.33 -0.32
44 AT3G07420 asparaginyl-tRNA synthetase 2 ASPARAGINYL-TRNA SYNTHETASE 2,
asparaginyl-tRNA synthetase 2,
SYNTHETASE C2, ASPARAGINYL-TRNA
SYNTHETASE 2		 0.54 0.31 -0.32
45 AT5G59940 Cysteine/Histidine-rich C1 domain family protein -0.54 0.32 -0.3
46 AT3G09360 Cyclin/Brf1-like TBP-binding protein 0.54 0.3 -0.32
47 AT4G07890 transposable element gene -0.54 0.3 -0.32
48 AT5G49190 sucrose synthase 2 ATSUS2, SUCROSE SYNTHASE FROM
ARABIDOPSIS, sucrose synthase 2		 -0.54 0.31 -0.31
49 AT1G05040 BEST Arabidopsis thaliana protein match is:
Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1); Has
14 Blast hits to 12 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.54 0.32 -0.32
50 AT2G38300 myb-like HTH transcriptional regulator family protein 0.54 0.3 -0.3
51 AT2G38900 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.54 0.29 -0.31
52 AT1G45130 beta-galactosidase 5 beta-galactosidase 5 -0.53 0.33 -0.3
53 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.53 0.32 -0.31
54 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.53 0.32 -0.34
55 AT5G10070 RNase L inhibitor protein-related 0.53 0.32 -0.31
56 AT2G46190 Mitochondrial glycoprotein family protein -0.52 0.32 -0.31
57 AT3G58760 Integrin-linked protein kinase family 0.52 0.32 -0.32
58 AT4G18350 nine-cis-epoxycarotenoid dioxygenase 2 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 2,
nine-cis-epoxycarotenoid
dioxygenase 2		 0.52 0.32 -0.32
59 AT2G04063 glycine-rich protein -0.52 0.31 -0.3
60 AT4G15030 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site
protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits
to 5700 proteins in 376 species: Archae - 6; Bacteria -
264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses -
76; Other Eukaryotes - 2900 (source: NCBI BLink).		 0.52 0.32 -0.3
61 AT2G17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA
reductase 2,
3-HYDROXY-3-METHYLGLUTARYL-COENZYM
E A REDUCTASE 2		 -0.51 0.31 -0.32
62 AT5G25270 Ubiquitin-like superfamily protein 0.51 0.34 -0.36
63 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.51 0.32 -0.34
64 AT1G64960 ARM repeat superfamily protein hypersensitive to excess boron 1 -0.51 0.3 -0.32
65 AT4G21490 NAD(P)H dehydrogenase B3 NAD(P)H dehydrogenase B3 -0.51 0.31 -0.32
66 AT3G45880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.5 0.32 -0.3
67 AT5G26100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G44170.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.5 0.32 -0.32
68 AT1G64010 Serine protease inhibitor (SERPIN) family protein -0.5 0.33 -0.32
69 AT3G29070 emp24/gp25L/p24 family/GOLD family protein -0.5 0.32 -0.3
70 AT3G47400 Plant invertase/pectin methylesterase inhibitor superfamily -0.48 0.31 -0.31
71 AT4G22100 beta glucosidase 2 beta glucosidase 2 -0.48 0.31 -0.31
72 AT1G34200 Glyceraldehyde-3-phosphate dehydrogenase-like family
protein		 -0.48 0.31 -0.33
73 AT2G34870 hydroxyproline-rich glycoprotein family protein maternal effect embryo arrest 26 -0.48 0.33 -0.3
74 AT1G73560 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.48 0.34 -0.31
75 AT3G59030 MATE efflux family protein A. THALIANA TRANSPARENT TESTA,
TRANSPARENT TESTA 12		 -0.48 0.32 -0.31
76 AT5G27800 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.47 0.31 -0.32
77 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 -0.47 0.3 -0.32
78 AT2G27270 BEST Arabidopsis thaliana protein match is: Late
embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family (TAIR:AT4G01410.1); Has 250 Blast hits
to 250 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.46 0.31 -0.31
79 AT4G10710 global transcription factor C global transcription factor C -0.46 0.33 -0.35
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
80 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		0.63 0.45 -0.42 C0107