AT2G05520 : GLYCINE-RICH PROTEIN 3
Query Information
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AGICode AT2G05520
Description glycine-rich protein 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G05520 glycine-rich protein 3 GLYCINE-RICH PROTEIN 3,
ARABIDOPSIS GLYCINE RICH PROTEIN
3, glycine-rich protein 3,
GLYCINE-RICH PROTEIN 3		 1 0.31 -0.32
2 AT1G20620 catalase 3 ATCAT3, catalase 3, SENESCENCE 2 0.85 0.3 -0.33
3 AT4G22730 Leucine-rich repeat protein kinase family protein 0.84 0.31 -0.32
4 AT5G50210 quinolinate synthase ONSET OF LEAF DEATH 5, quinolinate
synthase, SULFUR E 3		 -0.83 0.32 -0.32
5 AT4G14350 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.83 0.31 -0.29
6 AT5G35080 INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mannose-6-phosphate receptor, binding
(InterPro:IPR009011), Glucosidase II beta subunit-like
(InterPro:IPR012913); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.78 0.31 -0.32
7 AT2G20900 diacylglycerol kinase 5 ATDGK5, diacylglycerol kinase 5 -0.78 0.32 -0.31
8 AT4G37430 cytochrome P450, family 91, subfamily A, polypeptide 2 CYTOCHROME P450 MONOOXYGENASE
81F1, cytochrome P450, family 91,
subfamily A, polypeptide 2		 -0.78 0.33 -0.31
9 AT5G48400 Glutamate receptor family protein ATGLR1.2, GLUTAMATE RECEPTOR 1.2 -0.76 0.33 -0.31
10 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 -0.76 0.32 -0.31
11 AT3G16560 Protein phosphatase 2C family protein 0.76 0.31 -0.32
12 AT1G62290 Saposin-like aspartyl protease family protein 0.75 0.3 -0.32
13 AT2G01190 Octicosapeptide/Phox/Bem1p family protein PIGMENT DEFECTIVE 331 -0.75 0.32 -0.31
14 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.75 0.31 -0.32
15 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4		 0.74 0.31 -0.31
16 AT4G28300 Protein of unknown function (DUF1421) -0.74 0.29 -0.32
17 AT3G26300 cytochrome P450, family 71, subfamily B, polypeptide 34 cytochrome P450, family 71,
subfamily B, polypeptide 34		 0.74 0.32 -0.33
18 AT5G56750 N-MYC downregulated-like 1 N-MYC downregulated-like 1 -0.73 0.3 -0.34
19 AT5G08260 serine carboxypeptidase-like 35 serine carboxypeptidase-like 35 0.73 0.31 -0.31
20 AT4G33220 pectin methylesterase 44 A. THALIANA PECTIN METHYLESTERASE
44, pectin methylesterase 44		 0.73 0.3 -0.32
21 AT1G13100 cytochrome P450, family 71, subfamily B, polypeptide 29 cytochrome P450, family 71,
subfamily B, polypeptide 29		 0.73 0.32 -0.33
22 AT4G38420 SKU5 similar 9 SKU5 similar 9 -0.73 0.32 -0.32
23 AT3G05570 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39235.1); Has 73 Blast hits
to 73 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.34 -0.31
24 AT3G53280 cytochrome p450 71b5 cytochrome p450 71b5 0.72 0.32 -0.31
25 AT1G62690 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.31 -0.31
26 AT2G16630 Pollen Ole e 1 allergen and extensin family protein 0.72 0.3 -0.33
27 AT1G06890 nodulin MtN21 /EamA-like transporter family protein -0.71 0.3 -0.29
28 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 0.71 0.33 -0.3
29 AT1G50460 hexokinase-like 1 ATHKL1, hexokinase-like 1 -0.71 0.33 -0.32
30 AT1G68740 EXS (ERD1/XPR1/SYG1) family protein PHO1;H1 0.71 0.32 -0.3
31 AT4G23880 unknown protein; Has 73 Blast hits to 69 proteins in 22
species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2;
Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 0.71 0.33 -0.32
32 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 -0.71 0.32 -0.32
33 AT4G23300 cysteine-rich RLK (RECEPTOR-like protein kinase) 22 cysteine-rich RLK (RECEPTOR-like
protein kinase) 22		 0.71 0.32 -0.31
34 AT2G40060 Clathrin light chain protein clathrin light chain 2 -0.7 0.3 -0.32
35 AT5G15410 Cyclic nucleotide-regulated ion channel family protein CYCLIC NUCLEOTIDE-GATED CHANNEL 2,
CYCLIC NUCLEOTIDE GATED CHANNEL 2,
DEFENSE NO DEATH 1		 0.7 0.33 -0.32
36 AT5G53410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.32 -0.33
37 AT3G25585 aminoalcoholphosphotransferase aminoalcoholphosphotransferase,
ATAAPT2		 -0.69 0.29 -0.32
38 AT3G15380 Plasma-membrane choline transporter family protein 0.69 0.33 -0.3
39 AT1G27950 glycosylphosphatidylinositol-anchored lipid protein
transfer 1		 glycosylphosphatidylinositol-ancho
red lipid protein transfer 1		 0.69 0.3 -0.33
40 AT1G24470 beta-ketoacyl reductase 2 ATKCR2, beta-ketoacyl reductase 2 0.69 0.33 -0.31
41 AT1G31710 Copper amine oxidase family protein -0.69 0.31 -0.33
42 AT1G74330 Protein kinase superfamily protein -0.69 0.32 -0.31
43 AT5G41100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in
220 species: Archae - 4; Bacteria - 108; Metazoa - 481;
Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes -
367 (source: NCBI BLink).		 -0.69 0.32 -0.33
44 AT4G26690 PLC-like phosphodiesterase family protein Glycerophosphodiester
phosphodiesterase (GDPD) like 3,
GLYCEROPHOSPHODIESTERASE-LIKE 2,
MUTANT ROOT HAIR 5, SHAVEN 3		 -0.69 0.3 -0.31
45 AT2G19710 Regulator of Vps4 activity in the MVB pathway protein -0.69 0.32 -0.33
46 AT3G26670 Protein of unknown function (DUF803) -0.69 0.33 -0.32
47 AT2G01180 phosphatidic acid phosphatase 1 ATLPP1, phosphatidic acid
phosphatase 1, LIPID PHOSPHATE
PHOSPHATASE 1, phosphatidic acid
phosphatase 1		 -0.69 0.32 -0.34
48 AT3G22190 IQ-domain 5 IQ-domain 5 0.68 0.33 -0.32
49 AT4G00360 cytochrome P450, family 86, subfamily A, polypeptide 2 ABERRANT INDUCTION OF TYPE THREE
1, cytochrome P450, family 86,
subfamily A, polypeptide 2		 0.68 0.31 -0.31
50 AT2G44060 Late embryogenesis abundant protein, group 2 0.68 0.31 -0.33
51 AT2G29940 pleiotropic drug resistance 3 ATP-binding cassette G31,
PLEIOTROPIC DRUG RESISTANCE 3,
pleiotropic drug resistance 3		 -0.68 0.32 -0.32
52 AT4G30110 heavy metal atpase 2 ARABIDOPSIS HEAVY METAL ATPASE 2,
heavy metal atpase 2		 0.68 0.28 -0.29
53 AT1G01070 nodulin MtN21 /EamA-like transporter family protein 0.68 0.3 -0.32
54 AT2G38530 lipid transfer protein 2 cell growth defect factor-3, LP2,
lipid transfer protein 2		 0.67 0.3 -0.3
55 AT1G07720 3-ketoacyl-CoA synthase 3 3-ketoacyl-CoA synthase 3 0.67 0.33 -0.3
56 AT1G13700 6-phosphogluconolactonase 1 6-phosphogluconolactonase 1 0.67 0.3 -0.34
57 AT4G14440 3-hydroxyacyl-CoA dehydratase 1 ARABIDOPSIS THALIANA DELTA(3),
DELTA(2)-ENOYL COA ISOMERASE 3,
DELTA(3), DELTA(2)-ENOYL COA
ISOMERASE 3, 3-hydroxyacyl-CoA
dehydratase 1		 0.67 0.32 -0.32
58 AT5G47130 Bax inhibitor-1 family protein 0.67 0.32 -0.32
59 AT3G57780 BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast
hits to 2460 proteins in 357 species: Archae - 16; Bacteria
- 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses -
72; Other Eukaryotes - 1360 (source: NCBI BLink).		 0.67 0.3 -0.36
60 AT4G39770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
H		 -0.67 0.29 -0.32
61 AT1G21250 cell wall-associated kinase PRO25, cell wall-associated kinase 0.67 0.31 -0.32 IPI
62 AT5G44210 erf domain protein 9 ERF DOMAIN PROTEIN- 9, ERF DOMAIN
PROTEIN 9, erf domain protein 9		 0.66 0.31 -0.33
63 AT1G09730 Cysteine proteinases superfamily protein -0.66 0.31 -0.34
64 AT1G10390 Nucleoporin autopeptidase -0.66 0.29 -0.33
65 AT5G36290 Uncharacterized protein family (UPF0016) -0.66 0.31 -0.3
66 AT3G19970 alpha/beta-Hydrolases superfamily protein -0.66 0.3 -0.32
67 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.66 0.32 -0.31
68 AT3G51460 Phosphoinositide phosphatase family protein ROOT HAIR DEFECTIVE4 -0.66 0.31 -0.33
69 AT5G50340 ATP-dependent peptidases;nucleotide binding;serine-type
endopeptidases;DNA helicases;ATP binding;damaged DNA
binding;nucleoside-triphosphatases		 0.66 0.3 -0.32
70 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 0.66 0.32 -0.33
71 AT1G05805 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.31 -0.31
72 AT4G03240 frataxin homolog ATFH, frataxin homolog -0.65 0.32 -0.32
73 AT5G54380 protein kinase family protein THESEUS1 -0.65 0.3 -0.33
74 AT2G23560 methyl esterase 7 ARABIDOPSIS THALIANA METHYL
ESTERASE 7, methyl esterase 7		 -0.65 0.32 -0.32
75 AT1G08090 nitrate transporter 2:1 ACH1, NITRATE TRANSPORTER 2.1,
nitrate transporter 2:1, LATERAL
ROOT INITIATION 1, NITRATE
TRANSPORTER 2, NITRATE TRANSPORTER
2.1, nitrate transporter 2:1,
NRT2;1AT		 0.65 0.32 -0.29
76 AT4G11900 S-locus lectin protein kinase family protein 0.65 0.34 -0.32
77 AT1G19610 Arabidopsis defensin-like protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
78, PDF1.4		 0.65 0.31 -0.33
78 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 0.65 0.32 -0.33
79 AT2G14290 F-box family protein with a domain of unknown function
(DUF295)		 -0.65 0.34 -0.32
80 AT4G19810 Glycosyl hydrolase family protein with chitinase insertion
domain		 class V chitinase 0.65 0.32 -0.34
81 AT2G23180 cytochrome P450, family 96, subfamily A, polypeptide 1 cytochrome P450, family 96,
subfamily A, polypeptide 1		 0.64 0.34 -0.31
82 AT3G24530 AAA-type ATPase family protein / ankyrin repeat family
protein		 -0.64 0.3 -0.31
83 AT4G31590 Cellulose-synthase-like C5 CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5,
CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5		 -0.64 0.32 -0.31
84 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 0.64 0.33 -0.3
85 AT5G66040 sulfurtransferase protein 16 sulfurtransferase protein 16 0.64 0.32 -0.33
86 AT3G25870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits
to 50 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.31 -0.32
87 AT5G18150 Methyltransferase-related protein -0.64 0.29 -0.32
88 AT3G22400 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
5, LOX5		 -0.64 0.33 -0.31
89 AT1G73680 alpha dioxygenase alpha dioxygenase 0.64 0.32 -0.32
90 AT5G43460 HR-like lesion-inducing protein-related -0.63 0.33 -0.32
91 AT1G67060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 283 Blast hits to 281
proteins in 136 species: Archae - 0; Bacteria - 145;
Metazoa - 0; Fungi - 65; Plants - 41; Viruses - 0; Other
Eukaryotes - 32 (source: NCBI BLink).		 -0.63 0.32 -0.33
92 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein -0.63 0.31 -0.29
93 AT4G02030 Vps51/Vps67 family (components of vesicular transport)
protein		 -0.63 0.31 -0.3
94 AT2G47960 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF974 (InterPro:IPR010378); Has 285 Blast
hits to 284 proteins in 126 species: Archae - 0; Bacteria -
0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0;
Other Eukaryotes - 35 (source: NCBI BLink).		 -0.63 0.31 -0.3
95 AT5G64130 cAMP-regulated phosphoprotein 19-related protein -0.63 0.32 -0.31
96 AT3G02880 Leucine-rich repeat protein kinase family protein -0.63 0.3 -0.35
97 AT2G31090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.29
98 AT1G76340 golgi nucleotide sugar transporter 3 golgi nucleotide sugar transporter
3		 -0.62 0.32 -0.32
99 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E		 -0.62 0.33 -0.29
100 AT5G19100 Eukaryotic aspartyl protease family protein -0.62 0.33 -0.34
101 AT3G19190 autophagy 2 ATATG2, AUTOPHAGY 2 -0.62 0.3 -0.31
102 AT5G53850 haloacid dehalogenase-like hydrolase family protein -0.62 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		0.79 0.43 -0.46 C0263
104 C0226 Raffinose pentahydrate D-(+)-Raffinose pentahydrate - galactolipid biosynthesis suppression,
polysaccharide biosynthesis 		-0.63 0.34 -0.31