AT2G24120 : PIGMENT DEFECTIVE 319
Query Information
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AGICode AT2G24120
Description DNA/RNA polymerases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 1 0.31 -0.32
2 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.3 -0.36
3 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.88 0.33 -0.32
4 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 0.86 0.32 -0.33
5 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.86 0.33 -0.33
6 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.85 0.31 -0.3
7 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.85 0.31 -0.31
8 AT3G21300 RNA methyltransferase family protein 0.85 0.32 -0.3
9 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.84 0.32 -0.3
10 AT3G51870 Mitochondrial substrate carrier family protein 0.84 0.33 -0.31
11 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.84 0.31 -0.34
12 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.83 0.32 -0.31
13 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.83 0.34 -0.3
14 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.83 0.3 -0.34
15 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.83 0.33 -0.3
16 AT5G08400 Protein of unknown function (DUF3531) 0.82 0.32 -0.32
17 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.81 0.33 -0.32
18 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.81 0.31 -0.29
19 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 0.81 0.31 -0.32
20 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.8 0.31 -0.31
21 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.8 0.34 -0.32
22 AT5G39980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8 0.33 -0.31
23 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.79 0.31 -0.32
24 AT3G13310 Chaperone DnaJ-domain superfamily protein -0.79 0.31 -0.32
25 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.79 0.31 -0.32
26 AT1G18090 5'-3' exonuclease family protein 0.79 0.29 -0.31
27 AT4G26670 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.79 0.32 -0.31
28 AT2G37860 Protein of unknown function (DUF3411) LOWER CELL DENSITY 1 0.78 0.31 -0.3
29 AT5G53620 unknown protein; INVOLVED IN: biological_process unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 28929 Blast hits to 19542 proteins in
1425 species: Archae - 211; Bacteria - 3079; Metazoa -
14558; Fungi - 2157; Plants - 966; Viruses - 80; Other
Eukaryotes - 7878 (source: NCBI BLink).		 0.78 0.32 -0.3
30 AT3G02060 DEAD/DEAH box helicase, putative 0.78 0.31 -0.32
31 AT3G56680 Single-stranded nucleic acid binding R3H protein 0.77 0.33 -0.32
32 AT2G33290 SU(VAR)3-9 homolog 2 ATSUVH2, SET DOMAIN-CONTAINING
PROTEIN 3, SU(VAR)3-9 homolog 2		 0.77 0.31 -0.31
33 AT5G02250 Ribonuclease II/R family protein ARABIDOPSIS THALIANA MITOCHONDRIAL
RNASE II, EMBRYO DEFECTIVE 2730,
ribonucleotide reductase 1		 0.77 0.33 -0.3
34 AT2G04030 Chaperone protein htpG family protein HEAT SHOCK PROTEIN 90.5, CR88,
EMBRYO DEFECTIVE 1956, HEAT SHOCK
PROTEIN 88.1, HEAT SHOCK PROTEIN
90.5		 0.77 0.33 -0.33
35 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.77 0.32 -0.31
36 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.77 0.33 -0.3
37 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.77 0.35 -0.3
38 AT1G72550 tRNA synthetase beta subunit family protein 0.77 0.32 -0.33
39 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.77 0.31 -0.31
40 AT5G08415 Radical SAM superfamily protein 0.76 0.31 -0.31
41 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.3 -0.31
42 AT2G31530 SecY protein transport family protein EMBRYO DEFECTIVE 2289, SECY
HOMOLOG 2		 0.76 0.32 -0.31
43 AT4G31560 high chlorophyll fluorescence 153 high chlorophyll fluorescence 153 0.76 0.31 -0.31
44 AT1G61390 S-locus lectin protein kinase family protein 0.76 0.31 -0.3
45 AT3G20440 Alpha amylase family protein BRANCHING ENZYME 1, EMBRYO
DEFECTIVE 2729		 0.76 0.32 -0.3
46 AT5G23070 Thymidine kinase 0.76 0.3 -0.32
47 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 0.76 0.32 -0.31
48 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 0.76 0.31 -0.33
49 AT3G11100 sequence-specific DNA binding transcription factors -0.75 0.31 -0.31
50 AT5G58740 HSP20-like chaperones superfamily protein -0.72 0.31 -0.31
51 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.32 -0.31
52 AT5G17490 RGA-like protein 3 AtRGL3, RGA-like protein 3 -0.71 0.34 -0.31
53 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.7 0.3 -0.32
54 AT1G52140 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits
to 114 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.29
55 AT5G05230 RING/U-box superfamily protein -0.69 0.35 -0.32
56 AT3G10800 Basic-leucine zipper (bZIP) transcription factor family
protein		 BZIP28 -0.69 0.32 -0.32
57 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 -0.69 0.3 -0.31
58 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.68 0.32 -0.3
59 AT4G39090 Papain family cysteine protease RESPONSIVE TO DEHYDRATION 19,
RESPONSIVE TO DEHYDRATION 19A		 -0.68 0.32 -0.3
60 AT2G23920 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.3 -0.33
61 AT4G21810 DERLIN-2.1 DERLIN-2.1 -0.68 0.31 -0.34
62 AT4G34390 extra-large GTP-binding protein 2 extra-large GTP-binding protein 2 -0.67 0.32 -0.32
63 AT4G24400 CBL-interacting protein kinase 8 ATCIPK8, CBL-interacting protein
kinase 8, PROTEIN KINASE 11,
SNF1-RELATED PROTEIN KINASE 3.13		 -0.67 0.3 -0.32
64 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.67 0.29 -0.31
65 AT1G03610 Protein of unknown function (DUF789) -0.67 0.32 -0.32
66 AT1G42420 transposable element gene -0.67 0.32 -0.33
67 AT5G23640 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.32 -0.32
68 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 -0.66 0.31 -0.33
69 AT4G35480 RING-H2 finger A3B RING-H2 finger A3B -0.66 0.31 -0.3
70 AT4G11700 Protein of unknown function (DUF626) -0.66 0.33 -0.32
71 AT1G19230 Riboflavin synthase-like superfamily protein -0.66 0.3 -0.29
72 AT3G13620 Amino acid permease family protein -0.66 0.32 -0.33
73 AT3G04060 NAC domain containing protein 46 NAC domain containing protein 46,
NAC domain containing protein 46		 -0.66 0.31 -0.32
74 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 -0.65 0.3 -0.31
75 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 -0.65 0.32 -0.31