AT2G35500 : shikimate kinase-like 2
Query Information
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AGICode AT2G35500
Description shikimate kinase like 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 1 0.31 -0.32
2 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.96 0.3 -0.31
3 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.96 0.31 -0.31
4 AT5G65220 Ribosomal L29 family protein 0.95 0.31 -0.3
5 AT2G33450 Ribosomal L28 family 0.95 0.32 -0.31
6 AT3G12930 Lojap-related protein 0.95 0.31 -0.31
7 AT5G47190 Ribosomal protein L19 family protein 0.95 0.3 -0.32
8 AT4G17560 Ribosomal protein L19 family protein 0.95 0.3 -0.33
9 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.95 0.31 -0.32
10 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.95 0.31 -0.31
11 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.94 0.32 -0.3
12 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.94 0.33 -0.31
13 AT3G54210 Ribosomal protein L17 family protein 0.94 0.31 -0.32
14 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.94 0.3 -0.31
15 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.94 0.31 -0.31
16 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.94 0.31 -0.33
17 AT1G14270 CAAX amino terminal protease family protein 0.94 0.32 -0.31
18 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.94 0.3 -0.32
19 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.94 0.31 -0.34
20 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.93 0.33 -0.32
21 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.93 0.34 -0.3
22 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.93 0.34 -0.32
23 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.93 0.3 -0.34
24 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.93 0.32 -0.32
25 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.93 0.33 -0.33
26 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.93 0.31 -0.3
27 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.93 0.31 -0.33
28 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.93 0.34 -0.31
29 AT3G13120 Ribosomal protein S10p/S20e family protein 0.93 0.31 -0.31
30 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.93 0.3 -0.32
31 AT4G37510 Ribonuclease III family protein 0.93 0.32 -0.31
32 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.93 0.33 -0.31
33 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.93 0.29 -0.3
34 AT3G28460 methyltransferases 0.92 0.31 -0.32
35 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.92 0.31 -0.32
36 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.92 0.32 -0.31
37 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.92 0.31 -0.3
38 AT4G39460 S-adenosylmethionine carrier 1 S-adenosylmethionine carrier 1,
SAM TRANSPORTER1		 0.92 0.3 -0.31
39 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.92 0.32 -0.31
40 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.92 0.31 -0.32
41 AT2G22230 Thioesterase superfamily protein 0.92 0.33 -0.31
42 AT5G55220 trigger factor type chaperone family protein 0.92 0.33 -0.31
43 AT2G43030 Ribosomal protein L3 family protein 0.92 0.32 -0.32
44 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.92 0.33 -0.31
45 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.92 0.32 -0.34
46 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.92 0.31 -0.32
47 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.92 0.31 -0.31
48 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.92 0.32 -0.33
49 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.92 0.3 -0.34
50 AT1G06190 Rho termination factor 0.91 0.31 -0.31
51 AT4G01310 Ribosomal L5P family protein 0.91 0.3 -0.33
52 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.91 0.32 -0.32
53 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 0.91 0.31 -0.29
54 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.91 0.33 -0.33
55 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.91 0.32 -0.31
56 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.91 0.33 -0.32
57 AT1G22700 Tetratricopeptide repeat (TPR)-like superfamily protein 0.91 0.31 -0.32
58 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.91 0.29 -0.32
59 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.91 0.34 -0.33
60 AT1G02280 translocon at the outer envelope membrane of chloroplasts
33		 ATTOC33, PLASTID PROTEIN IMPORT 1,
translocon at the outer envelope
membrane of chloroplasts 33		 0.91 0.32 -0.34
61 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 0.91 0.33 -0.32
62 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.91 0.31 -0.32
63 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.91 0.28 -0.31
64 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.91 0.34 -0.32
65 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.91 0.31 -0.3
66 AT3G51140 Protein of unknown function (DUF3353) 0.91 0.31 -0.31
67 AT2G45270 glycoprotease 1 glycoprotease 1 0.9 0.31 -0.32
68 AT4G34290 SWIB/MDM2 domain superfamily protein 0.9 0.32 -0.32
69 AT3G08740 elongation factor P (EF-P) family protein 0.9 0.33 -0.31
70 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.9 0.31 -0.33
71 AT3G06730 Thioredoxin z thioredoxin putative plastidic,
Thioredoxin z		 0.9 0.32 -0.3
72 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.9 0.32 -0.31
73 AT3G19810 Protein of unknown function (DUF177) 0.9 0.3 -0.31
74 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.9 0.3 -0.3
75 AT5G63310 nucleoside diphosphate kinase 2 ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE
KINASE 2, NUCLEOSIDE DIPHOSPHATE
KINASE IA, NDPK IA IA, NDP KINASE
1A, nucleoside diphosphate kinase
2		 0.9 0.3 -0.33
76 AT2G39670 Radical SAM superfamily protein 0.9 0.32 -0.3
77 AT1G11430 plastid developmental protein DAG, putative 0.9 0.35 -0.32
78 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.9 0.32 -0.32
79 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.9 0.33 -0.33
80 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.9 0.3 -0.29
81 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.9 0.31 -0.3
82 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.9 0.3 -0.32
83 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 0.9 0.31 -0.33
84 AT5G54600 Translation protein SH3-like family protein 0.9 0.3 -0.31
85 AT2G18710 SECY homolog 1 SECY homolog 1 0.9 0.32 -0.33
86 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ALBINO OR PALE GREEN MUTANT 1,
E37, INNER ENVELOPE PROTEIN 37,
VITAMIN E DEFECTIVE 3		 0.9 0.32 -0.31
87 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.9 0.3 -0.32
88 AT5G50250 chloroplast RNA-binding protein 31B chloroplast RNA-binding protein
31B		 0.89 0.32 -0.32
89 AT1G11850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 12 growth stages; Has 38777 Blast hits to
8185 proteins in 741 species: Archae - 46; Bacteria -
14846; Metazoa - 13013; Fungi - 1392; Plants - 5894;
Viruses - 543; Other Eukaryotes - 3043 (source: NCBI
BLink).		 0.89 0.32 -0.32
90 AT1G69740 Aldolase superfamily protein HEMB1 0.89 0.31 -0.34
91 AT1G36390 Co-chaperone GrpE family protein 0.89 0.32 -0.31
92 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.89 0.31 -0.32
93 AT4G37040 methionine aminopeptidase 1D methionine aminopeptidase 1D 0.89 0.32 -0.31
94 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.89 0.3 -0.3
95 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.89 0.32 -0.3
96 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.89 0.3 -0.33
97 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.89 0.3 -0.3
98 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.89 0.3 -0.32
99 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.89 0.32 -0.31
100 AT4G26370 antitermination NusB domain-containing protein 0.89 0.33 -0.31
101 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.89 0.31 -0.32
102 AT4G28210 embryo defective 1923 embryo defective 1923 0.89 0.31 -0.34
103 AT1G60230 Radical SAM superfamily protein 0.89 0.32 -0.32
104 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.89 0.31 -0.32
105 AT3G20230 Ribosomal L18p/L5e family protein 0.89 0.32 -0.32
106 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.89 0.33 -0.3
107 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.89 0.31 -0.32
108 AT2G24090 Ribosomal protein L35 0.89 0.33 -0.32
109 AT4G15510 Photosystem II reaction center PsbP family protein 0.89 0.31 -0.34
110 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 0.89 0.31 -0.3
111 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.81 0.31 -0.33
112 AT1G63440 heavy metal atpase 5 heavy metal atpase 5 -0.79 0.32 -0.3
113 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 -0.79 0.29 -0.3
114 AT3G14060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits
to 30 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.32 -0.33
115 AT5G18780 F-box/RNI-like superfamily protein -0.78 0.31 -0.31
116 AT5G49880 mitotic checkpoint family protein -0.76 0.32 -0.32
117 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.76 0.31 -0.31
118 AT5G24090 chitinase A chitinase A, chitinase A -0.75 0.33 -0.31
119 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.74 0.29 -0.32
120 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 -0.74 0.32 -0.33
121 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 -0.74 0.3 -0.32
122 AT1G69526 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.31 -0.31
123 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.73 0.31 -0.29
124 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein -0.73 0.34 -0.31
125 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.72 0.33 -0.32
126 AT5G67340 ARM repeat superfamily protein -0.71 0.32 -0.31
127 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.71 0.3 -0.32
128 AT4G11350 Protein of unknown function (DUF604) -0.7 0.33 -0.28
129 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.7 0.32 -0.33
130 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.7 0.32 -0.29
131 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.7 0.31 -0.31
132 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 -0.7 0.31 -0.3
133 AT4G37295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, root, leaf;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.7 0.31 -0.31
134 AT2G02970 GDA1/CD39 nucleoside phosphatase family protein -0.69 0.33 -0.32
135 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.69 0.32 -0.32
136 AT1G10050 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.68 0.3 -0.32
137 AT5G38030 MATE efflux family protein -0.68 0.3 -0.33
138 AT1G30760 FAD-binding Berberine family protein -0.67 0.32 -0.29
139 AT5G61060 histone deacetylase 5 ATHDA5, histone deacetylase 5,
HDA5		 -0.67 0.29 -0.31
140 AT3G03520 non-specific phospholipase C3 non-specific phospholipase C3 -0.67 0.34 -0.32