4.0:Information of module
Methyl Jasmonate 1 h
In comparison with treated group help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009753 response to jasmonic acid BP 4.231e-44
GO:0009694 jasmonic acid metabolic process BP 1.531e-41
GO:0009611 response to wounding BP 9.938e-38
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048509 regulation of meristem development BP 1.695e-06
GO:0007166 cell surface receptor signaling pathway BP 6.975e-05
GO:0010075 regulation of meristem growth BP 1.058e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Methyl Jasmonate 1 h 		Log2 signal ratio
treated group
1 266901_at AT2G34600 JAZ7, jasmonate-zim-domain protein 7, TIFY5B 1.401 0.077
2 256159_at AT1G30135 JAZ8, jasmonate-zim-domain protein 8, TIFY5A 1.325 -0.005
3 259866_at AT1G76640 CML39, CALMODULIN LIKE 39 1.269 0.045
4 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 1.263 0.190
5 266246_at AT2G27690 CYP94C1, cytochrome P450, family 94, subfamily C, polypeptide 1 1.108 0.018
6 260399_at AT1G72520 ATLOX4, Arabidopsis thaliana lipoxygenase 4, LOX4, lipoxygenase 4 1.093 0.068
7 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 1.091 0.248
8 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 1.081 0.070
9 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A 1.024 0.183
10 245253_at AT4G15440 CYP74B2, HPL1, hydroperoxide lyase 1 1.024 0.085
11 247360_at AT5G63450 CYP94B1, cytochrome P450, family 94, subfamily B, polypeptide 1 1.011 0.123
12 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 1.001 -0.058
13 260237_at AT1G74430 ATMYB95, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 95, ATMYBCP66, ARABIDOPSIS THALIANA MYB DOMAIN CONTAINING PROTEIN 66, MYB95, myb domain protein 95 0.998 0.057
14 260205_at AT1G70700 JAZ9, JASMONATE-ZIM-DOMAIN PROTEIN 9, TIFY7 0.998 0.025
15 264415_at AT1G43160 RAP2.6, related to AP2 6 0.966 0.415
16 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 0.945 0.092
17 261037_at AT1G17420 ATLOX3, Arabidopsis thaliana lipoxygenase 3, LOX3, lipoxygenase 3 0.926 0.124
18 248353_at AT5G52320 CYP96A4, cytochrome P450, family 96, subfamily A, polypeptide 4 0.893 0.044
19 250455_at AT5G09980 PROPEP4, elicitor peptide 4 precursor 0.854 0.173
20 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.840 0.071
21 255786_at AT1G19670 ATCLH1, chlorophyllase 1, ATHCOR1, CORONATINE-INDUCED PROTEIN 1, CLH1, chlorophyllase 1, CORI1, CORONATINE-INDUCED PROTEIN 1 0.828 0.105
22 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.826 0.309
23 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.822 0.387
24 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] 0.817 -0.005
25 245244_at AT1G44350 ILL6, IAA-leucine resistant (ILR)-like gene 6 0.806 0.111
26 250149_at AT5G14700 [NAD(P)-binding Rossmann-fold superfamily protein] 0.774 0.120
27 247175_at AT5G65280 GCL1, GCR2-like 1 0.761 0.103
28 265327_at AT2G18210 unknown 0.750 -0.085
29 266419_at AT2G38760 ANN3, ANNEXIN 3, ANNAT3, annexin 3, AtANN3 0.746 0.170
30 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.744 0.628
31 265452_at AT2G46510 AIB, ABA-inducible BHLH-type transcription factor, ATAIB, ABA-inducible BHLH-type transcription factor, JAM1, JA-associated MYC2-like 1 0.708 0.063
32 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.699 0.055
33 254150_at AT4G24350 [Phosphorylase superfamily protein] 0.690 -0.037
34 266456_at AT2G22770 NAI1 0.687 -0.004
35 252200_at AT3G50280 [HXXXD-type acyl-transferase family protein] 0.686 0.311
36 256489_at AT1G31550 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.681 0.107
37 262653_at AT1G14130 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.668 0.068
38 250669_at AT5G06870 ATPGIP2, ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2, PGIP2, polygalacturonase inhibiting protein 2 0.667 0.169
39 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 0.667 0.035
40 247047_at AT5G66650 unknown 0.664 0.039
41 245041_at AT2G26530 AR781 0.658 0.101
42 256017_at AT1G19180 AtJAZ1, JAZ1, jasmonate-zim-domain protein 1, TIFY10A 0.627 0.284
43 257274_at AT3G14510 [Polyprenyl synthetase family protein] 0.620 -0.048
44 259518_at AT1G20510 OPCL1, OPC-8:0 CoA ligase1 0.615 0.062
45 262171_at AT1G74950 JAZ2, JASMONATE-ZIM-DOMAIN PROTEIN 2, TIFY10B 0.610 0.051
46 246494_at AT5G16190 ATCSLA11, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A11, CSLA11, cellulose synthase like A11 0.604 0.077
47 259977_at AT1G76590 [PLATZ transcription factor family protein] 0.599 -0.032
48 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] 0.595 0.093
49 261713_at AT1G32640 ATMYC2, JAI1, JASMONATE INSENSITIVE 1, JIN1, JASMONATE INSENSITIVE 1, MYC2, RD22BP1, ZBF1 0.590 0.156
50 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 0.585 0.088
51 246432_at AT5G17490 AtRGL3, RGL3, RGA-like protein 3 0.580 0.056
52 265530_at AT2G06050 AtOPR3, DDE1, DELAYED DEHISCENCE 1, OPR3, oxophytodienoate-reductase 3 0.555 0.062
53 258507_at AT3G06500 A/N-InvC, alkaline/neutral invertase C 0.548 0.128
54 249970_at AT5G19100 [Eukaryotic aspartyl protease family protein] 0.546 0.019
55 258189_at AT3G17860 JAI3, JASMONATE-INSENSITIVE 3, JAZ3, jasmonate-zim-domain protein 3, TIFY6B 0.538 0.067
56 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 0.538 0.331
57 247474_at AT5G62280 unknown -0.685 -0.287
58 252965_at AT4G38860 SAUR16, SMALL AUXIN UPREGULATED RNA 16 -0.594 -0.055
59 245906_at AT5G11070 unknown -0.562 -0.032
60 260770_at AT1G49200 [RING/U-box superfamily protein] -0.562 -0.184
61 248028_at AT5G55620 unknown -0.456 -0.104
62 252573_at AT3G45260 [C2H2-like zinc finger protein] -0.442 -0.072
63 265028_at AT1G24530 [Transducin/WD40 repeat-like superfamily protein] -0.425 -0.068
64 264605_at AT1G04550 BDL, BODENLOS, IAA12, indole-3-acetic acid inducible 12 -0.420 -0.050
65 261717_at AT1G18400 BEE1, BR enhanced expression 1 -0.397 -0.175
66 251169_at AT3G63210 MARD1, MEDIATOR OF ABA-REGULATED DORMANCY 1 -0.393 -0.002
67 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.373 -0.022
68 262811_at AT1G11700 unknown -0.368 -0.095
69 246917_at AT5G25280 [serine-rich protein-related] -0.368 -0.041
70 260856_at AT1G21910 DREB26, dehydration response element-binding protein 26 -0.363 -0.051
71 257467_at AT1G31320 LBD4, LOB domain-containing protein 4 -0.362 0.018
72 250007_at AT5G18670 BAM9, BETA-AMYLASE 9, BMY3, beta-amylase 3 -0.345 -0.093
73 260030_at AT1G68880 AtbZIP, basic leucine-zipper 8, bZIP, basic leucine-zipper 8 -0.336 -0.030
74 259596_at AT1G28130 GH3.17 -0.326 -0.009
75 267012_at AT2G39220 PLA IIB, PLP6, PATATIN-like protein 6 -0.320 0.017
76 263632_at AT2G04795 unknown -0.307 -0.055
77 251356_at AT3G61060 AtPP2-A13, phloem protein 2-A13, PP2-A13, phloem protein 2-A13 -0.299 -0.091
78 266803_at AT2G28930 APK1B, protein kinase 1B, PK1B, protein kinase 1B -0.286 -0.016
79 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.285 -0.085
80 248273_at AT5G53500 [Transducin/WD40 repeat-like superfamily protein] -0.281 -0.125
81 248978_at AT5G45070 AtPP2-A8, phloem protein 2-A8, PP2-A8, phloem protein 2-A8 -0.278 -0.048
82 260395_at AT1G69780 ATHB13 -0.275 -0.053
83 247199_at AT5G65210 TGA1, TGACG sequence-specific binding protein 1 -0.268 0.064
84 253253_at AT4G34750 SAUR49, SMALL AUXIN UPREGULATED RNA 49 -0.267 0.002
85 265939_at AT2G19650 [Cysteine/Histidine-rich C1 domain family protein] -0.259 -0.039
86 247059_at AT5G66690 UGT72E2 -0.258 0.025
87 254159_at AT4G24240 ATWRKY7, WRKY7, WRKY DNA-binding protein 7 -0.255 -0.090
88 253332_at AT4G33420 [Peroxidase superfamily protein] -0.255 0.253
89 250155_at AT5G15160 BHLH134, BASIC HELIX-LOOP-HELIX PROTEIN 134, BNQ2, BANQUO 2 -0.253 0.030
90 263739_at AT2G21320 BBX18, B-box domain protein 18 -0.248 -0.036
91 251090_at AT5G01340 AtmSFC1, mSFC1, mitochondrial succinate-fumarate carrier 1 -0.247 0.050
92 247057_at AT5G66770 [GRAS family transcription factor] -0.245 -0.059
93 258609_at AT3G02910 [AIG2-like (avirulence induced gene) family protein] -0.244 -0.051
94 263228_at AT1G30700 [FAD-binding Berberine family protein] -0.239 0.689
95 260673_at AT1G19330 unknown -0.238 0.016
96 249765_at AT5G24030 SLAH3, SLAC1 homologue 3 -0.235 0.177
97 257331_at ATMG01330 ORF107H -0.232 0.041
98 266514_at AT2G47890 [B-box type zinc finger protein with CCT domain] -0.227 -0.054
99 254016_at AT4G26150 CGA1, cytokinin-responsive gata factor 1, GATA22, GATA TRANSCRIPTION FACTOR 22, GNL, GNC-LIKE -0.226 -0.048
100 248208_at AT5G53980 ATHB52, homeobox protein 52, HB52, homeobox protein 52 -0.225 -0.058
101 245905_at AT5G11090 [serine-rich protein-related] -0.221 0.019
102 265250_at AT2G01950 BRL2, BRI1-like 2, VH1, VASCULAR HIGHWAY 1 -0.217 -0.010
103 257701_at AT3G12710 [DNA glycosylase superfamily protein] -0.212 -0.092
104 255876_at AT2G40480 unknown -0.209 0.002
105 255266_at AT4G05200 CRK25, cysteine-rich RLK (RECEPTOR-like protein kinase) 25 -0.206 -0.074
106 249047_at AT5G44410 [FAD-binding Berberine family protein] -0.203 -0.041
107 251946_at AT3G53540 TRM19, TON1 Recruiting Motif 19 -0.199 -0.045
108 248801_at AT5G47370 HAT2 -0.197 -0.045
109 248420_at AT5G51560 [Leucine-rich repeat protein kinase family protein] -0.196 -0.006
110 252485_at AT3G46530 RPP13, RECOGNITION OF PERONOSPORA PARASITICA 13 -0.188 -0.027
111 248708_at AT5G48560 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.186 -0.011