4.0:Information of module
GA3 1 h (ga1)
In comparison with root - 04% oxygen - 30min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010087 phloem or xylem histogenesis BP 2.411e-03
GO:0008361 regulation of cell size BP 2.417e-03
GO:0009926 auxin polar transport BP 5.330e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009739 response to gibberellin BP 2.796e-06
GO:0006857 oligopeptide transport BP 1.028e-03
GO:0015833 peptide transport BP 1.028e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
GA3 1 h (ga1)		 Log2 signal ratio
root - 04% oxygen - 30min
1 258091_at AT3G14560 unknown 0.314 0.051
2 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.236 0.160
3 248332_at AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 0.178 -0.169
4 255250_at AT4G05100 AtMYB74, myb domain protein 74, MYB74, myb domain protein 74 0.145 0.028
5 251356_at AT3G61060 AtPP2-A13, phloem protein 2-A13, PP2-A13, phloem protein 2-A13 0.142 -0.030
6 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 0.129 0.041
7 255403_at AT4G03400 DFL2, DWARF IN LIGHT 2, GH3-10 0.120 -0.052
8 265922_at AT2G18480 [Major facilitator superfamily protein] 0.118 0.014
9 254043_at AT4G25990 CIL 0.112 -0.024
10 258878_at AT3G03170 unknown 0.106 0.077
11 248385_at AT5G51910 [TCP family transcription factor ] 0.104 -0.073
12 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 0.100 -0.055
13 247827_at AT5G58500 LSH5, LIGHT SENSITIVE HYPOCOTYLS 5 0.100 0.062
14 258255_at AT3G26800 unknown 0.099 0.008
15 251088_at AT5G01480 [Cysteine/Histidine-rich C1 domain family protein] 0.098 -0.007
16 261413_at AT1G07630 PLL5, pol-like 5 0.097 0.008
17 252537_at AT3G45710 [Major facilitator superfamily protein] 0.094 0.002
18 266969_at AT2G39540 [Gibberellin-regulated family protein] 0.093 -0.045
19 262331_at AT1G64050 unknown 0.093 -0.105
20 260799_at AT1G78270 AtUGT85A4, UDP-glucosyl transferase 85A4, UGT85A4, UDP-glucosyl transferase 85A4 0.092 -0.007
21 256548_at AT3G14770 AtSWEET2, SWEET2 0.091 -0.279
22 259439_at AT1G01480 ACS2, 1-amino-cyclopropane-1-carboxylate synthase 2, AT-ACC2 0.089 -0.026
23 247057_at AT5G66770 [GRAS family transcription factor] 0.089 -0.108
24 249365_at AT5G40600 unknown 0.087 -0.042
25 258263_at AT3G15780 unknown 0.087 0.052
26 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.083 0.107
27 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.083 -0.057
28 267230_at AT2G44080 ARL, ARGOS-like 0.082 0.368
29 250255_at AT5G13730 SIG4, sigma factor 4, SIGD 0.079 0.009
30 258942_at AT3G09960 [Calcineurin-like metallo-phosphoesterase superfamily protein] 0.077 -0.034
31 261866_at AT1G50420 SCL-3, SCARECROW-LIKE 3, SCL3, scarecrow-like 3 -0.461 -0.024
32 251200_at AT3G63010 ATGID1B, GID1B, GA INSENSITIVE DWARF1B -0.409 -0.060
33 261768_at AT1G15550 ATGA3OX1, ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1, GA3OX1, gibberellin 3-oxidase 1, GA4, GA REQUIRING 4 -0.393 -0.020
34 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 -0.338 -0.022
35 245341_at AT4G16447 unknown -0.315 0.133
36 259302_at AT3G05120 ATGID1A, GA INSENSITIVE DWARF1A, GID1A, GA INSENSITIVE DWARF1A -0.306 0.009
37 266912_at AT2G45900 TRM13, TON1 Recruiting Motif 13 -0.281 -0.014
38 263436_at AT2G28690 unknown -0.280 0.022
39 246000_at AT5G20820 SAUR76, SMALL AUXIN UPREGULATED RNA 76 -0.261 0.177
40 263325_at AT2G04240 XERICO -0.258 0.002
41 261883_at AT1G80870 [Protein kinase superfamily protein] -0.238 -0.005
42 245861_at AT5G28300 AtGT2L, GT2L, GT-2Like protein -0.224 -0.005
43 256697_at AT3G20660 AtOCT4, organic cation/carnitine transporter4, OCT4, organic cation/carnitine transporter4 -0.218 -0.074
44 251062_at AT5G01840 ATOFP1, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, OFP1, ovate family protein 1 -0.213 0.046
45 258299_at AT3G23410 ATFAO3, ARABIDOPSIS FATTY ALCOHOL OXIDASE 3, FAO3, fatty alcohol oxidase 3 -0.202 -0.002
46 247013_at AT5G67480 ATBT4, BT4, BTB and TAZ domain protein 4 -0.184 -0.004
47 265249_at AT2G01940 ATIDD15, ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15, SGR5, SHOOT GRAVITROPISM 5 -0.178 0.021
48 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 -0.175 0.227
49 256370_at AT1G66780 [MATE efflux family protein] -0.158 0.020
50 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -0.153 -0.010
51 248271_at AT5G53420 [CCT motif family protein] -0.146 0.063
52 255899_at AT1G17970 [RING/U-box superfamily protein] -0.145 -0.175
53 262669_at AT1G62850 [Class I peptide chain release factor] -0.139 0.000
54 246144_at AT5G20110 [Dynein light chain type 1 family protein] -0.133 0.035
55 247594_at AT5G60800 [Heavy metal transport/detoxification superfamily protein ] -0.129 -0.020
56 249136_at AT5G43180 unknown -0.128 -0.022
57 252911_at AT4G39510 CYP96A12, cytochrome P450, family 96, subfamily A, polypeptide 12 -0.128 -0.034
58 266323_at AT2G46700 ATCRK3, CRK3, CDPK-related kinase 3 -0.127 -0.018
59 264287_at AT1G61930 unknown -0.127 -0.037