4.0:Information of module
Brz220 12 h
In comparison with cngc19 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042435 indole-containing compound biosynthetic ... BP 3.604e-05
GO:0009684 indoleacetic acid biosynthetic process BP 8.516e-05
GO:0009683 indoleacetic acid metabolic process BP 1.024e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050789 regulation of biological process BP 3.105e-04
GO:0009062 fatty acid catabolic process BP 3.418e-04
GO:0065007 biological regulation BP 3.752e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Brz220 12 h 		Log2 signal ratio
cngc19
1 246658_at AT5G35260 [similar to replication protein-related [Arabidopsis thaliana] (TAIR:AT4G07440.1)] 1.250 -0.344
2 265949_at AT2G18540 [RmlC-like cupins superfamily protein] 1.194 -0.327
3 257274_at AT3G14510 [Polyprenyl synthetase family protein] 0.997 -0.306
4 261967_at AT1G36440 unknown 0.990 -0.142
5 262812_at AT1G11690 unknown 0.898 -0.270
6 263603_at AT2G16340 unknown 0.832 -0.260
7 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 0.758 -0.144
8 265803_at AT2G18115 [pseudogene] 0.739 -0.278
9 254317_at AT4G22510 unknown 0.734 -0.234
10 266729_at AT2G03130 [Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein] 0.717 -0.290
11 260963_at AT1G44990 unknown 0.679 -0.265
12 249390_at AT5G40130 [pseudogene] 0.633 -0.148
13 248505_at AT5G50360 unknown 0.631 -0.275
14 265567_at AT2G05580 [Glycine-rich protein family] 0.625 -0.283
15 248072_at AT5G55680 [glycine-rich protein] 0.616 -0.328
16 261381_at AT1G05460 SDE3, SILENCING DEFECTIVE 0.603 -0.213
17 265907_at AT2G25650 [DNA-binding storekeeper protein-related transcriptional regulator] 0.576 0.013
18 258248_at AT3G29140 unknown 0.554 -0.327
19 264606_at AT1G04660 [glycine-rich protein] 0.550 -0.235
20 245717_at AT5G33390 [glycine-rich protein] 0.538 -0.242
21 258308_at AT3G30570 [non-LTR retrotransposon family (LINE), has a 7.9e-38 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] 0.535 -0.295
22 262085_at AT1G56060 unknown 0.531 -0.256
23 250962_at AT5G02990 [Galactose oxidase/kelch repeat superfamily protein] 0.525 -0.376
24 263352_at AT2G22080 unknown 0.511 0.127
25 256800_at AT3G20900 unknown 0.505 -0.307
26 252198_x_at AT3G50250 unknown 0.498 -0.245
27 245084_at AT2G23290 AtMYB70, myb domain protein 70, MYB70, myb domain protein 70 0.495 -0.291
28 265885_at AT2G42330 [GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain] 0.485 -0.366
29 264966_at AT1G60570 [Galactose oxidase/kelch repeat superfamily protein] 0.466 -0.349
30 263769_at AT2G06390 transposable element gene 0.456 -0.502
31 256990_at AT3G28590 unknown 0.448 -0.243
32 249357_at AT5G40490 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.444 -0.262
33 259170_at AT3G03510 [Phototropic-responsive NPH3 family protein] 0.443 -0.260
34 254587_at AT4G19520 [disease resistance protein (TIR-NBS-LRR class) family] 0.443 -0.182
35 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] 0.441 -0.400
36 258240_at AT3G27660 OLE3, OLEOSIN 3, OLEO4, oleosin 4 0.437 -0.369
37 253648_at AT4G29940 PRHA, pathogenesis related homeodomain protein A 0.436 -0.032
38 256615_at AT3G22250 [UDP-Glycosyltransferase superfamily protein] 0.432 -0.272
39 267058_at AT2G32510 MAPKKK17, mitogen-activated protein kinase kinase kinase 17 0.421 -0.270
40 251389_at AT3G60850 unknown 0.415 -0.259
41 254319_at AT4G22560 unknown 0.414 -0.312
42 256641_at AT3G32270 unknown 0.410 -0.368
43 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.410 -0.116
44 246956_at AT5G04890 RTM2, RESTRICTED TEV MOVEMENT 2 0.406 -0.229
45 261337_at AT1G44810 [DNA-binding storekeeper protein-related transcriptional regulator] 0.388 0.198
46 257541_at AT3G25950 [TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein] 0.385 -0.258
47 256597_at AT3G28500 [60S acidic ribosomal protein family] 0.377 -0.391
48 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 0.367 -0.278
49 245953_at AT5G28520 [Mannose-binding lectin superfamily protein] 0.362 -0.469
50 266807_at AT2G29920 unknown 0.359 -0.446
51 246947_at AT5G25120 CYP71B11, ytochrome p450, family 71, subfamily B, polypeptide 11 0.358 -0.283
52 253031_at AT4G38190 ATCSLD4, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE D4, CSLD4, cellulose synthase like D4 0.357 -0.265
53 257207_at AT3G14900 EMB3120, EMBRYO DEFECTIVE 3120 0.354 -0.128
54 246377_at AT1G57550 [Low temperature and salt responsive protein family] 0.348 -0.361
55 256645_at AT3G24250 [glycine-rich protein] 0.343 -0.248
56 247456_at AT5G62160 AtZIP12, zinc transporter 12 precursor, ZIP12, zinc transporter 12 precursor 0.340 -0.388
57 266344_at AT2G01580 unknown 0.339 0.076
58 259410_at AT1G13340 [Regulator of Vps4 activity in the MVB pathway protein] 0.337 0.194
59 251099_at AT5G01660 unknown 0.336 -0.138
60 255202_at AT4G07500 unknown 0.332 -0.175
61 265627_at AT2G27285 [Coiled-coil domain-containing protein 55 (DUF2040)] 0.328 0.031
62 266917_at AT2G45830 DTA2, downstream target of AGL15 2 0.327 0.185
63 251467_at AT3G59470 [Far-red impaired responsive (FAR1) family protein] 0.325 0.102
64 257265_at AT3G14980 IDM1, increased DNA methylation 1, ROS4, REPRESSOR OF SILENCING 4 0.325 -0.402
65 245070_at AT2G23240 AtMT4b, Arabidopsis thaliana metallothionein 4b 0.324 -0.017
66 265908_at AT4G00270 [DNA-binding storekeeper protein-related transcriptional regulator] 0.322 0.163
67 256114_at AT1G16850 unknown 0.318 0.084
68 253634_at AT4G30590 AtENODL12, ENODL12, early nodulin-like protein 12 0.317 -0.276
69 264902_at AT1G23060 MDP40, MICROTUBULE DESTABILIZING PROTEIN 40 0.312 0.010
70 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 0.309 0.032
71 261888_at AT1G80800 [pseudogene] 0.309 -0.237
72 253987_at AT4G26270 PFK3, phosphofructokinase 3 0.307 -0.099
73 263497_at AT2G42540 COR15, COR15A, cold-regulated 15a 0.305 -0.691
74 263294_at AT2G10870 unknown 0.304 -0.360
75 263285_at AT2G36120 DOT1, DEFECTIVELY ORGANIZED TRIBUTARIES 1 0.302 -0.168
76 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 0.300 -0.107
77 255927_at AT1G12630 [Integrase-type DNA-binding superfamily protein] 0.298 -0.197
78 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 0.297 -0.220
79 265923_at AT2G18470 AtPERK4, proline-rich extensin-like receptor kinase 4, PERK4, proline-rich extensin-like receptor kinase 4 0.297 -0.216
80 256968_at AT3G21070 ATNADK-1, NAD KINASE 1, NADK1, NAD kinase 1 0.295 0.153
81 260175_at AT1G72000 A/N-InvF, alkaline/neutral invertase F 0.295 -0.298
82 250868_at AT5G03860 MLS, malate synthase -0.878 0.193
83 249773_at AT5G24140 SQP2, squalene monooxygenase 2 -0.775 -0.139
84 266503_at AT2G47780 [Rubber elongation factor protein (REF)] -0.676 0.047
85 255538_at AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 -0.517 0.030
86 251356_at AT3G61060 AtPP2-A13, phloem protein 2-A13, PP2-A13, phloem protein 2-A13 -0.413 0.147
87 255149_at AT4G08150 BP, BREVIPEDICELLUS, BP1, BREVIPEDICELLUS 1, KNAT1, KNOTTED-like from Arabidopsis thaliana -0.397 0.197
88 260362_at AT1G70530 CRK3, cysteine-rich RLK (RECEPTOR-like protein kinase) 3 -0.336 0.219
89 267409_at AT2G34910 unknown -0.314 0.372
90 258957_at AT3G01420 ALPHA-DOX1, alpha-dioxygenase 1, DIOX1, DOX1, PADOX-1, plant alpha dioxygenase 1 -0.313 0.512
91 262444_at AT1G47480 [alpha/beta-Hydrolases superfamily protein] -0.293 0.476
92 254293_at AT4G23060 IQD22, IQ-domain 22 -0.291 -0.101
93 251107_at AT5G01610 unknown -0.287 0.328
94 259894_at AT1G71430 unknown -0.282 0.024
95 259525_at AT1G12560 ATEXP7, ATEXPA7, expansin A7, ATHEXP ALPHA 1.26, EXP7, EXPA7, expansin A7 -0.268 0.056
96 262450_at AT1G11320 unknown -0.263 -0.202
97 248075_at AT5G55740 CRR21, chlororespiratory reduction 21 -0.258 -0.256
98 246019_at AT5G10690 [pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein] -0.257 -0.281
99 261647_at AT1G27740 RSL4, root hair defective 6-like 4 -0.250 -0.193
100 255105_at AT4G08620 SULTR1;1, sulphate transporter 1;1 -0.247 -0.042
101 255502_at AT4G02410 AtLPK1, LecRK-IV.3, L-type lectin receptor kinase IV.3, LPK1, lectin-like protein kinase 1 -0.245 -0.097
102 266124_at AT2G45080 cycp3;1, cyclin p3;1 -0.242 -0.209
103 264836_at AT1G03610 unknown -0.237 0.195
104 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.237 0.190
105 260345_at AT1G69270 AtRPK1, RPK1, receptor-like protein kinase 1 -0.236 0.265
106 250723_at AT5G06300 LOG7, LONELY GUY 7 -0.236 0.324
107 246235_at AT4G36830 HOS3-1 -0.234 0.091
108 245228_at AT3G29810 COBL2, COBRA-like protein 2 precursor -0.230 0.279
109 248028_at AT5G55620 unknown -0.228 -0.352
110 252143_at AT3G51150 [ATP binding microtubule motor family protein] -0.228 -0.357
111 266984_at AT2G39570 ACR9, ACT domain repeats 9 -0.226 0.122
112 252426_at AT3G47630 unknown -0.224 -0.061
113 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 -0.221 0.088
114 247536_at AT5G61650 CYCP4, CYCP4;2, CYCLIN P4;2 -0.218 0.298
115 259496_at AT1G15900 unknown -0.218 -0.302
116 248023_at AT5G56450 PM-ANT -0.215 -0.065
117 267592_at AT2G39710 [Eukaryotic aspartyl protease family protein] -0.207 0.162
118 247240_at AT5G64660 ATCMPG2, CMPG2, CYS, MET, PRO, and GLY protein 2 -0.206 0.393
119 251700_at AT3G56640 SEC15A, exocyst complex component sec15A -0.201 0.271
120 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 -0.199 -0.380
121 245831_at AT1G48840 unknown -0.195 0.346
122 246398_at AT1G58100 TCP8, TCP domain protein 8 -0.195 0.063
123 250740_at AT5G05760 ATSED5, ATSYP31, SED5, T-SNARE SED 5, SYP31, syntaxin of plants 31 -0.195 0.043
124 252940_at AT4G39270 [Leucine-rich repeat protein kinase family protein] -0.195 0.229
125 267010_at AT2G39250 SNZ, SCHNARCHZAPFEN -0.191 -0.141
126 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 -0.188 0.209
127 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 -0.187 0.265
128 250066_at AT5G17930 [MIF4G domain-containing protein / MA3 domain-containing protein] -0.184 0.175
129 255787_at AT2G33590 AtCRL1, CRL1, CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1 -0.182 0.530
130 253496_at AT4G31870 ATGPX7, GLUTATHIONE PEROXIDASE 7, GPX7, glutathione peroxidase 7 -0.182 -0.138
131 255694_at AT4G00050 UNE10, unfertilized embryo sac 10 -0.181 -0.373
132 263932_at AT2G35990 LOG2, LONELY GUY 2 -0.179 -0.354
133 259417_at AT1G02340 FBI1, HFR1, LONG HYPOCOTYL IN FAR-RED, REP1, REDUCED PHYTOCHROME SIGNALING 1, RSF1, REDUCED SENSITIVITY TO FAR-RED LIGHT 1 -0.178 -0.081
134 263707_at AT1G09300 [Metallopeptidase M24 family protein] -0.178 0.052
135 255642_at AT4G00820 iqd17, IQ-domain 17 -0.177 -0.014
136 267012_at AT2G39220 PLA IIB, PLP6, PATATIN-like protein 6 -0.177 0.111
137 249522_at AT5G38700 unknown -0.176 0.273
138 247786_at AT5G58600 PMR5, POWDERY MILDEW RESISTANT 5, TBL44, TRICHOME BIREFRINGENCE-LIKE 44 -0.175 0.096
139 263145_at AT1G54090 ATEXO70D2, exocyst subunit exo70 family protein D2, EXO70D2, exocyst subunit exo70 family protein D2 -0.173 0.380
140 245678_at AT1G56610 [Protein with RNI-like/FBD-like domains] -0.172 -0.044
141 246009_at AT5G08335 ATICMTB, ARABIDOPSIS THALIANA ISOPRENYL CYSTEINE METHYLTRANSFERASE B, ATSTE14B, ICMTB, ISOPRENYL CYSTEINE METHYLTRANSFERASE B -0.172 0.070
142 255501_at AT4G02400 [U3 ribonucleoprotein (Utp) family protein] -0.171 0.172
143 259139_at AT3G10240 [F-box and associated interaction domains-containing protein] -0.170 -0.170
144 255622_at AT4G01070 GT72B1, UGT72B1, UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1 -0.169 0.331
145 258726_at AT3G11745 unknown -0.169 0.103
146 252379_at AT3G47730 ABCA2, ATP-binding cassette A2, ATATH1, A. THALIANA ABC2 HOMOLOG 1, ATH1, ABC2 homolog 1 -0.167 0.409
147 253617_at AT4G30410 [sequence-specific DNA binding transcription factors] -0.167 0.159
148 262495_at AT1G21780 [BTB/POZ domain-containing protein] -0.166 0.242
149 252667_at AT3G44200 ATNEK6, NIMA-RELATED KINASE6, IBO1, NEK6, NIMA (never in mitosis, gene A)-related 6 -0.166 0.094
150 260522_x_at AT2G41730 unknown -0.165 0.412
151 245297_at AT4G16510 [YbaK/aminoacyl-tRNA synthetase-associated domain] -0.165 0.132
152 260112_at AT1G63310 unknown -0.164 0.277
153 262706_at AT1G16280 AtRH36, Arabidopsis thaliana RNA helicase 36, RH36, RNA helicase 36, SWA3, SLOW WALKER 3 -0.164 0.323
154 255696_at AT4G00110 GAE3, UDP-D-glucuronate 4-epimerase 3 -0.163 -0.013
155 257923_at AT3G23160 unknown -0.161 0.284
156 253039_at AT4G37760 SQE3, squalene epoxidase 3 -0.161 0.054
157 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 -0.160 -0.155
158 248397_at AT5G52140 [RING/U-box superfamily protein] -0.160 -0.326
159 252757_at AT3G42700 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT3G42690.1)] -0.158 -0.494
160 261413_at AT1G07630 PLL5, pol-like 5 -0.158 0.321
161 264862_at AT1G24330 [ARM repeat superfamily protein] -0.156 -0.277
162 263069_at AT2G17590 [Cysteine/Histidine-rich C1 domain family protein] -0.156 -0.092