4.0:Information of module
Imbibed 1 h (seed)
In comparison with FLIGHT TAGESB plate6 SHOOTS help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009612 response to mechanical stimulus BP 1.854e-07
GO:0010200 response to chitin BP 5.358e-07
GO:0010243 response to organonitrogen compound BP 8.590e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006354 DNA-templated transcription, elongation BP 4.663e-15
GO:0015979 photosynthesis BP 5.433e-10
GO:0006091 generation of precursor metabolites and ... BP 1.870e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Imbibed 1 h (seed)		 Log2 signal ratio
FLIGHT TAGESB plate6 SHOOTS
1 253113_at AT4G35985 [Senescence/dehydration-associated protein-related] 0.829 0.030
2 257076_at AT3G19680 unknown 0.710 0.034
3 252212_at AT3G50310 MAPKKK20, mitogen-activated protein kinase kinase kinase 20, MKKK20, MAPKK kinase 20 0.688 0.108
4 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 0.668 0.128
5 266269_at AT2G29480 ATGSTU2, glutathione S-transferase tau 2, GST20, GLUTATHIONE S-TRANSFERASE 20, GSTU2, glutathione S-transferase tau 2 0.546 -0.067
6 257654_at AT3G13310 DJC66, DNA J protein C66 0.537 0.147
7 250098_at AT5G17350 unknown 0.456 0.109
8 255807_at AT4G10270 [Wound-responsive family protein] 0.424 0.043
9 245757_at AT1G35140 EXL1, EXORDIUM like 1, PHI-1, PHOSPHATE-INDUCED 1 0.386 0.037
10 259106_at AT3G05490 RALFL22, ralf-like 22 0.373 0.015
11 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 0.368 0.173
12 249583_at AT5G37770 CML24, CALMODULIN-LIKE 24, TCH2, TOUCH 2 0.368 -0.006
13 250023_at AT5G18220 [O-Glycosyl hydrolases family 17 protein] 0.363 -0.047
14 259803_at AT1G72150 PATL1, PATELLIN 1 0.347 0.026
15 245096_at AT2G40880 ATCYSA, cystatin A, CYSA, cystatin A, FL3-27 0.342 -0.023
16 264704_at AT1G70090 GATL9, GALACTURONOSYLTRANSFERASE-LIKE 9, LGT8, glucosyl transferase family 8 0.340 0.053
17 248981_at AT5G45110 ATNPR3, NPR3, NPR1-like protein 3 0.335 0.080
18 260803_at AT1G78340 ATGSTU22, glutathione S-transferase TAU 22, GSTU22, glutathione S-transferase TAU 22 0.331 -0.078
19 252671_at AT3G44190 [FAD/NAD(P)-binding oxidoreductase family protein] 0.315 0.054
20 251640_at AT3G57450 unknown 0.284 0.033
21 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.275 0.061
22 258979_at AT3G09440 [Heat shock protein 70 (Hsp 70) family protein] 0.272 -0.014
23 254605_at AT4G18950 [Integrin-linked protein kinase family] 0.266 0.116
24 256430_at AT3G11020 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2B, DRE/CRT-binding protein 2B 0.256 0.005
25 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 0.247 -0.056
26 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 0.245 -0.040
27 264661_at AT1G09950 RAS1, RESPONSE TO ABA AND SALT 1 0.242 0.080
28 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.239 0.060
29 246018_at AT5G10695 unknown 0.239 0.063
30 262155_at AT1G52420 [UDP-Glycosyltransferase superfamily protein] 0.237 -0.007
31 245165_at AT2G33180 unknown 0.227 -0.018
32 249253_at AT5G42060 [DEK, chromatin associated protein] 0.216 0.170
33 260501_at AT2G41770 unknown 0.210 -0.052
34 245119_at AT2G41640 [Glycosyltransferase family 61 protein] 0.208 0.192
35 264089_at AT2G31200 ADF6, actin depolymerizing factor 6, ATADF6 0.208 -0.010
36 246193_at AT5G20880 [retrotransposon family] 0.204 0.040
37 261031_at AT1G17360 unknown 0.203 -0.018
38 260439_at AT1G68340 unknown 0.199 0.000
39 256755_at AT3G25600 [Calcium-binding EF-hand family protein] 0.198 0.023
40 244995_at ATCG00150 ATPI -0.476 -0.214
41 244973_at ATCG00690 PSBT, photosystem II reaction center protein T, PSBTC -0.443 -0.077
42 244999_at ATCG00190 RPOB, RNA polymerase subunit beta -0.421 -0.387
43 245005_at ATCG00330 RPS14, chloroplast ribosomal protein S14 -0.405 -0.434
44 251258_at AT3G62170 VGDH2, VANGUARD 1 homolog 2 -0.372 -0.124
45 244933_at ATCG01070 NDHE -0.350 -0.065
46 245026_at ATCG00140 ATPH -0.343 -0.099
47 244934_at ATCG01080 NDHG -0.337 -0.269
48 256538_x_at AT3G32900 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT3G47260.1)] -0.325 -0.463
49 245008_at ATCG00360 YCF3 -0.316 -0.084
50 244985_at ATCG00810 RPL22, ribosomal protein L22 -0.259 -0.063
51 261235_x_at AT1G32840 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT2G14130.1)] -0.234 -0.316
52 261623_at AT1G01980 [ATSEC1A] -0.223 0.015
53 244982_at ATCG00780 RPL14, ribosomal protein L14 -0.212 -0.027
54 244964_at ATCG00580 PSBE, photosystem II reaction center protein E -0.210 -0.054
55 244986_at ATCG00820 RPS19, ribosomal protein S19 -0.207 -0.019
56 266865_at AT2G29980 AtFAD3, FAD3, fatty acid desaturase 3 -0.203 0.009
57 251252_at AT3G62230 DAF1, DUO1-activated F-box 1 -0.202 -0.022
58 266636_at AT2G35370 GDCH, glycine decarboxylase complex H -0.198 -0.019
59 244984_at ATCG00800 [RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3)] -0.173 -0.027
60 252820_at AT3G42640 AHA8, H(+)-ATPase 8, HA8, H(+)-ATPase 8 -0.164 0.025
61 244963_at ATCG00570 PSBF, photosystem II reaction center protein F -0.161 -0.035
62 266765_at AT2G46860 AtPPa3, pyrophosphorylase 3, PPa3, pyrophosphorylase 3 -0.156 -0.065
63 244970_at ATCG00660 RPL20, ribosomal protein L20 -0.152 -0.126
64 248406_at AT5G51490 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.149 -0.070
65 244968_at ATCG00640 RPL33, ribosomal protein L33 -0.144 -0.008
66 254123_at AT4G24640 APPB1 -0.142 -0.001
67 258190_at AT3G29080 unknown -0.141 -0.048
68 255376_x_at AT4G03790 [gypsy-like retrotransposon family (Athila), has a 2.2e-286 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] -0.135 -0.205
69 256871_at AT3G26480 [Transducin family protein / WD-40 repeat family protein] -0.133 -0.073
70 267377_at AT2G26250 FDH, FIDDLEHEAD, KCS10, 3-ketoacyl-CoA synthase 10 -0.129 -0.025
71 263165_at AT1G03060 SPI, SPIRRIG -0.120 -0.024
72 258690_at AT3G07960 PIP5K6, phosphatidylinositol-4-phosphate 5-kinase 6 -0.119 0.092
73 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 -0.116 0.115
74 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 -0.115 -0.149
75 258181_at AT3G21670 AtNPF6.4, NPF6.4, NRT1/ PTR family 6.4 -0.114 -0.059
76 256668_at AT3G32190 unknown -0.110 -0.033
77 251674_at AT3G57250 [Emsy N Terminus (ENT) domain-containing protein] -0.108 -0.018