4.0:Information of module
FarRed Light 45min
In comparison with Bay-0-1h IAA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 5.966e-18
GO:0009725 response to hormone BP 3.572e-12
GO:0009719 response to endogenous stimulus BP 4.511e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009644 response to high light intensity BP 2.258e-18
GO:0009642 response to light intensity BP 1.920e-17
GO:0042542 response to hydrogen peroxide BP 2.934e-17
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
FarRed Light 45min 		Log2 signal ratio
Bay-0-1h IAA
1 254685_at AT4G13790 SAUR25, SMALL AUXIN UPREGULATED RNA 25 0.474 0.486
2 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.379 0.683
3 259332_at AT3G03830 SAUR28, SMALL AUXIN UP RNA 28 0.317 0.992
4 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.254 0.697
5 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.252 0.259
6 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.243 0.959
7 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 0.227 1.106
8 259785_at AT1G29490 SAUR68, SMALL AUXIN UPREGULATED 68 0.221 0.661
9 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA 0.204 0.839
10 255774_at AT1G18620 TRM3, TON1 Recruiting Motif 3 0.201 0.084
11 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.192 0.605
12 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 0.178 0.767
13 247778_at AT5G58750 [NAD(P)-binding Rossmann-fold superfamily protein] 0.170 0.211
14 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 0.169 0.459
15 248213_at AT5G53660 AtGRF7, growth-regulating factor 7, GRF7, growth-regulating factor 7 0.130 -0.042
16 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 0.130 0.720
17 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.128 0.841
18 265448_at AT2G46590 Dof-type zinc finger DNA-binding family protein 0.116 0.121
19 264990_at AT1G27210 [ARM repeat superfamily protein] 0.112 0.140
20 246275_at AT4G36540 BEE2, BR enhanced expression 2 0.107 0.316
21 263374_at AT2G20560 [DNAJ heat shock family protein] -0.324 -0.088
22 258133_at AT3G24500 ATMBF1C, MBF1C, multiprotein bridging factor 1C -0.293 -0.175
23 261081_at AT1G07350 SR45a, serine/arginine rich-like protein 45a -0.205 0.005
24 256245_at AT3G12580 ATHSP70, ARABIDOPSIS HEAT SHOCK PROTEIN 70, HSP70, heat shock protein 70 -0.204 -0.118
25 260248_at AT1G74310 ATHSP101, heat shock protein 101, HOT1, HSP101, heat shock protein 101 -0.198 -0.117
26 247293_at AT5G64510 TIN1, tunicamycin induced 1 -0.175 -0.033
27 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] -0.174 0.001
28 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] -0.170 0.027
29 254878_at AT4G11660 AT-HSFB2B, HSF7, HSFB2B, HEAT SHOCK TRANSCRIPTION FACTOR B2B -0.158 -0.056
30 249575_at AT5G37670 [HSP20-like chaperones superfamily protein] -0.153 -0.158
31 266828_at AT2G22930 [UDP-Glycosyltransferase superfamily protein] -0.151 -0.266
32 252519_at AT3G46360 unknown -0.150 -0.044
33 262811_at AT1G11700 unknown -0.148 -0.073
34 256518_at AT1G66080 unknown -0.146 -0.108
35 264402_at AT2G25140 CLPB-M, CASEIN LYTIC PROTEINASE B-M, CLPB4, casein lytic proteinase B4, HSP98.7, HEAT SHOCK PROTEIN 98.7 -0.146 -0.102
36 258830_at AT3G07090 [PPPDE putative thiol peptidase family protein] -0.146 -0.030
37 254211_at AT4G23570 SGT1A -0.143 -0.019
38 248045_at AT5G56030 AtHsp90.2, HEAT SHOCK PROTEIN 90.2, ERD8, EARLY-RESPONSIVE TO DEHYDRATION 8, HSP81-2, heat shock protein 81-2, HSP81.2, heat shock protein 81.2, HSP90.2, HEAT SHOCK PROTEIN 90.2 -0.136 -0.041
39 246944_at AT5G25450 [Cytochrome bd ubiquinol oxidase, 14kDa subunit] -0.128 -0.034