4.0:Information of module
FarRed Light 45min
In comparison with root endodermis and quiescent center 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 5.966e-18
GO:0009725 response to hormone BP 3.572e-12
GO:0009719 response to endogenous stimulus BP 4.511e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009644 response to high light intensity BP 2.258e-18
GO:0009642 response to light intensity BP 1.920e-17
GO:0042542 response to hydrogen peroxide BP 2.934e-17
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
FarRed Light 45min 		Log2 signal ratio
root endodermis and quiescent center 40 mM NaCl
1 254685_at AT4G13790 SAUR25, SMALL AUXIN UPREGULATED RNA 25 0.474 0.037
2 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.379 0.021
3 259332_at AT3G03830 SAUR28, SMALL AUXIN UP RNA 28 0.317 0.043
4 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.254 0.018
5 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.252 0.010
6 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.243 -0.062
7 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 0.227 -0.061
8 259785_at AT1G29490 SAUR68, SMALL AUXIN UPREGULATED 68 0.221 0.003
9 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA 0.204 -0.029
10 255774_at AT1G18620 TRM3, TON1 Recruiting Motif 3 0.201 -0.038
11 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.192 -0.061
12 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 0.178 -0.352
13 247778_at AT5G58750 [NAD(P)-binding Rossmann-fold superfamily protein] 0.170 -0.105
14 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE 0.169 0.072
15 248213_at AT5G53660 AtGRF7, growth-regulating factor 7, GRF7, growth-regulating factor 7 0.130 0.029
16 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 0.130 0.041
17 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.128 0.091
18 265448_at AT2G46590 Dof-type zinc finger DNA-binding family protein 0.116 -0.010
19 264990_at AT1G27210 [ARM repeat superfamily protein] 0.112 0.017
20 246275_at AT4G36540 BEE2, BR enhanced expression 2 0.107 0.020
21 263374_at AT2G20560 [DNAJ heat shock family protein] -0.324 0.234
22 258133_at AT3G24500 ATMBF1C, MBF1C, multiprotein bridging factor 1C -0.293 0.182
23 261081_at AT1G07350 SR45a, serine/arginine rich-like protein 45a -0.205 0.090
24 256245_at AT3G12580 ATHSP70, ARABIDOPSIS HEAT SHOCK PROTEIN 70, HSP70, heat shock protein 70 -0.204 0.175
25 260248_at AT1G74310 ATHSP101, heat shock protein 101, HOT1, HSP101, heat shock protein 101 -0.198 0.136
26 247293_at AT5G64510 TIN1, tunicamycin induced 1 -0.175 0.010
27 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] -0.174 0.164
28 267336_at AT2G19310 [HSP20-like chaperones superfamily protein] -0.170 0.244
29 254878_at AT4G11660 AT-HSFB2B, HSF7, HSFB2B, HEAT SHOCK TRANSCRIPTION FACTOR B2B -0.158 0.075
30 249575_at AT5G37670 [HSP20-like chaperones superfamily protein] -0.153 0.545
31 266828_at AT2G22930 [UDP-Glycosyltransferase superfamily protein] -0.151 -0.003
32 252519_at AT3G46360 unknown -0.150 0.068
33 262811_at AT1G11700 unknown -0.148 0.027
34 256518_at AT1G66080 unknown -0.146 0.084
35 264402_at AT2G25140 CLPB-M, CASEIN LYTIC PROTEINASE B-M, CLPB4, casein lytic proteinase B4, HSP98.7, HEAT SHOCK PROTEIN 98.7 -0.146 0.060
36 258830_at AT3G07090 [PPPDE putative thiol peptidase family protein] -0.146 0.101
37 254211_at AT4G23570 SGT1A -0.143 0.040
38 248045_at AT5G56030 AtHsp90.2, HEAT SHOCK PROTEIN 90.2, ERD8, EARLY-RESPONSIVE TO DEHYDRATION 8, HSP81-2, heat shock protein 81-2, HSP81.2, heat shock protein 81.2, HSP90.2, HEAT SHOCK PROTEIN 90.2 -0.136 -0.038
39 246944_at AT5G25450 [Cytochrome bd ubiquinol oxidase, 14kDa subunit] -0.128 0.309