4.0:Information of module
Oxidative Stress 3 h (root)
In comparison with cat2-2; harvested 8h continiously maintained in high CO2; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044085 cellular component biogenesis BP 2.588e-08
GO:0071840 cellular component organization or bioge... BP 3.533e-07
GO:0006793 phosphorus metabolic process BP 9.547e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0022613 ribonucleoprotein complex biogenesis BP 5.480e-06
GO:0042254 ribosome biogenesis BP 1.244e-05
GO:0006412 translation BP 2.928e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Oxidative Stress 3 h (root)		 Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;
1 257670_at AT3G20340 unknown 0.490 0.105
2 245550_at AT4G15330 CYP705A1, cytochrome P450, family 705, subfamily A, polypeptide 1 0.249 0.058
3 246476_at AT5G16730 [LOCATED IN: chloroplast] 0.247 -0.030
4 254313_at AT4G22460 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.236 0.055
5 267519_at AT2G30470 HSI2, high-level expression of sugar-inducible gene 2, VAL1, VP1/ABI3-LIKE 1 0.229 0.025
6 246229_at AT4G37160 sks15, SKU5 similar 15 0.228 -0.056
7 245584_at AT4G14940 AO1, amine oxidase 1, ATAO1, amine oxidase 1 0.212 0.081
8 249230_at AT5G42070 unknown 0.211 0.027
9 250204_at AT5G13990 ATEXO70C2, exocyst subunit exo70 family protein C2, EXO70C2, exocyst subunit exo70 family protein C2 0.205 0.031
10 257479_at AT1G16150 WAKL4, wall associated kinase-like 4 0.200 -0.019
11 247912_at AT5G57480 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.187 -0.074
12 263133_at AT1G78450 [SOUL heme-binding family protein] 0.172 0.025
13 258143_at AT3G18170 [Glycosyltransferase family 61 protein] 0.169 0.036
14 266055_at AT2G40650 [PRP38 family protein] 0.167 -0.032
15 256713_at AT2G34060 [Peroxidase superfamily protein] 0.163 0.038
16 263957_at AT2G35880 [TPX2 (targeting protein for Xklp2) protein family] 0.160 0.060
17 267418_at AT2G35000 ATL9, Arabidopsis toxicos en levadura 9 0.159 0.017
18 267635_at AT2G42220 [Rhodanese/Cell cycle control phosphatase superfamily protein] 0.148 0.026
19 262309_at AT1G70820 [phosphoglucomutase, putative / glucose phosphomutase, putative] 0.148 0.036
20 252439_at AT3G47400 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.147 -0.007
21 253790_at AT4G28660 PSB28, photosystem II reaction center PSB28 protein 0.146 0.022
22 253919_at AT4G27350 unknown 0.145 0.003
23 266011_at AT2G37440 [DNAse I-like superfamily protein] 0.140 -0.034
24 265643_at AT2G27390 [proline-rich family protein] 0.137 -0.080
25 247348_at AT5G63810 AtBGAL10, Arabidopsis thaliana beta-galactosidase 10, BGAL10, beta-galactosidase 10 0.136 0.036
26 266920_at AT2G45750 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.135 0.109
27 266222_at AT2G28780 unknown 0.125 0.023
28 263222_at AT1G30640 [Protein kinase family protein] 0.123 -0.095
29 265852_at AT2G42350 [RING/U-box superfamily protein] 0.122 -0.082
30 251061_at AT5G01830 SAUR21, SMALL AUXIN UP RNA 21 0.121 0.013
31 250095_at AT5G17230 PSY, PHYTOENE SYNTHASE 0.120 0.028
32 251540_at AT3G58740 CSY1, citrate synthase 1 0.118 0.021
33 253425_at AT4G32190 [Myosin heavy chain-related protein] 0.115 0.054
34 250366_at AT5G11420 unknown 0.115 0.049
35 262502_at AT1G21600 PTAC6, plastid transcriptionally active 6 0.115 0.033
36 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.114 0.068
37 266207_at AT2G27680 [NAD(P)-linked oxidoreductase superfamily protein] 0.114 0.038
38 264696_at AT1G70230 AXY4, ALTERED XYLOGLUCAN 4, TBL27, TRICHOME BIREFRINGENCE-LIKE 27 0.110 0.028
39 250661_at AT5G07030 [Eukaryotic aspartyl protease family protein] 0.108 0.049
40 267209_at AT2G30930 unknown 0.107 0.023
41 262444_at AT1G47480 [alpha/beta-Hydrolases superfamily protein] 0.106 -0.026
42 260704_at AT1G32470 [Single hybrid motif superfamily protein] 0.106 0.009
43 250376_at AT5G11550 [ARM repeat superfamily protein] 0.104 0.041
44 258149_at AT3G18110 EMB1270, embryo defective 1270 0.104 0.021
45 258167_at AT3G21560 BRT1, Bright Trichomes 1, UGT84A2, UDP-glucosyl transferase 84A2 0.103 0.036
46 264559_at AT1G09610 GXM3, glucuronoxylan methyltransferase 3 0.103 0.070
47 249333_at AT5G40990 GLIP1, GDSL lipase 1 -0.548 -0.055
48 260394_at AT1G74080 ATMYB122, MYB DOMAIN PROTEIN 122, MYB122, myb domain protein 122 -0.317 -0.109
49 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 -0.290 -0.076
50 258606_at AT3G02840 [ARM repeat superfamily protein] -0.279 -0.101
51 266292_at AT2G29350 SAG13, senescence-associated gene 13 -0.245 -0.105
52 246145_at AT5G19880 [Peroxidase superfamily protein] -0.243 -0.026
53 249188_at AT5G42830 [HXXXD-type acyl-transferase family protein] -0.220 -0.232
54 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 -0.216 -0.199
55 253088_at AT4G36220 CYP84A1, CYTOCHROME P450 84A1, FAH1, ferulic acid 5-hydroxylase 1 -0.210 0.008
56 256759_at AT3G25640 unknown -0.206 0.004
57 253044_at AT4G37290 unknown -0.188 -0.016
58 258947_at AT3G01830 [Calcium-binding EF-hand family protein] -0.164 -0.552
59 245375_at AT4G17660 [Protein kinase superfamily protein] -0.162 -0.019
60 249459_at AT5G39580 [Peroxidase superfamily protein] -0.159 -0.507
61 245875_at AT1G26240 [Proline-rich extensin-like family protein] -0.159 -0.016
62 253182_at AT4G35190 LOG5, LONELY GUY 5 -0.154 0.020
63 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 -0.151 -0.500
64 249001_at AT5G44990 [Glutathione S-transferase family protein] -0.149 -0.131
65 257061_at AT3G18250 [Putative membrane lipoprotein] -0.141 -0.324
66 252539_at AT3G45730 unknown -0.138 -0.180
67 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 -0.133 -0.121
68 266197_at AT2G39120 WTF9, what's this factor 9 -0.129 -0.037
69 257026_at AT3G19200 unknown -0.127 -0.014
70 265960_at AT2G37470 [Histone superfamily protein] -0.127 -0.001
71 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 -0.125 -0.045
72 246639_x_at AT5G34895 [similar to heat shock protein binding [Arabidopsis thaliana] (TAIR:AT1G32830.1)] -0.118 0.024
73 259439_at AT1G01480 ACS2, 1-amino-cyclopropane-1-carboxylate synthase 2, AT-ACC2 -0.118 -0.025
74 260278_at AT1G80590 ATWRKY66, WRKY66, WRKY DNA-binding protein 66 -0.116 0.028
75 250287_at AT5G13330 Rap2.6L, related to AP2 6l -0.112 -0.432
76 266616_at AT2G29680 ATCDC6, CDC6, cell division control 6 -0.109 0.061
77 255284_at AT4G04610 APR, APR1, APS reductase 1, ATAPR1, PRH19, PAPS REDUCTASE HOMOLOG 19 -0.107 0.010
78 254625_at AT4G18470 SNI1, SUPPRESSOR OF NPR1-1, INDUCIBLE 1 -0.103 0.049
79 253795_at AT4G28420 [Tyrosine transaminase family protein] -0.102 -0.003
80 261518_at AT1G71695 [Peroxidase superfamily protein] -0.101 0.040
81 254543_at AT4G19810 ChiC, class V chitinase -0.101 -0.048
82 253915_at AT4G27280 [Calcium-binding EF-hand family protein] -0.101 -0.082
83 252251_at AT3G49820 unknown -0.100 -0.035
84 252506_at AT3G46180 ATUTR5, UDP-GALACTOSE TRANSPORTER 5, UTR5, UDP-galactose transporter 5 -0.099 -0.002
85 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase -0.098 0.019
86 265742_at AT2G01290 RPI2, ribose-5-phosphate isomerase 2 -0.098 0.022
87 249751_at AT5G24650 [Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein] -0.096 0.005
88 264024_at AT2G21180 unknown -0.096 -0.031
89 247625_at AT5G60200 TMO6, TARGET OF MONOPTEROS 6 -0.094 0.089
90 245855_at AT5G13550 SULTR4;1, sulfate transporter 4.1 -0.092 -0.005
91 249771_at AT5G24080 [Protein kinase superfamily protein] -0.092 0.090