4.0:Information of module
P.syringae AvrRpt2 4 h (leaf)
In comparison with root callus inducing medium 96 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0051179 localization BP 8.395e-08
GO:0044765 single-organism transport BP 2.580e-07
GO:1902578 single-organism localization BP 3.112e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0051258 protein polymerization BP 4.323e-04
GO:0007020 microtubule nucleation BP 7.608e-04
GO:0046785 microtubule polymerization BP 1.116e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
P.syringae AvrRpt2 4 h (leaf)		 Log2 signal ratio
root callus inducing medium 96 h
1 252060_at AT3G52430 ATPAD4, ARABIDOPSIS PHYTOALEXIN DEFICIENT 4, PAD4, PHYTOALEXIN DEFICIENT 4 0.391 -0.288
2 262177_at AT1G74710 ATICS1, ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, EDS16, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, ICS1, ISOCHORISMATE SYNTHASE 1, SID2, SALICYLIC ACID INDUCTION DEFICIENT 2 0.365 -0.407
3 262731_at AT1G16420 ATMC8, ARABIDOPSIS THALIANA METACASPASE 8, AtMCP2e, metacaspase 2e, MC8, metacaspase 8, MCP2e, metacaspase 2e 0.305 -0.040
4 254905_at AT4G11170 RMG1, Resistance Methylated Gene 1 0.239 -0.047
5 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 0.200 -0.674
6 254211_at AT4G23570 SGT1A 0.196 -0.240
7 252234_at AT3G49780 ATPSK3 (FORMER SYMBOL), ATPSK4, phytosulfokine 4 precursor, PSK4, phytosulfokine 4 precursor 0.191 -0.615
8 246099_at AT5G20230 ATBCB, blue-copper-binding protein, BCB, BLUE COPPER BINDING PROTEIN, BCB, blue-copper-binding protein, SAG14, SENESCENCE ASSOCIATED GENE 14 0.173 -0.622
9 250279_at AT5G13200 [GRAM domain family protein] 0.141 -0.935
10 256797_at AT3G18600 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.135 0.156
11 260602_at AT1G55920 ATSERAT2;1, serine acetyltransferase 2;1, SAT1, SERINE ACETYLTRANSFERASE 1, SAT5, SERINE ACETYLTRANSFERASE 5, SERAT2;1, serine acetyltransferase 2;1 0.134 -0.046
12 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 0.125 -0.408
13 251538_at AT3G58660 [Ribosomal protein L1p/L10e family] 0.120 0.306
14 249719_at AT5G35735 [Auxin-responsive family protein] 0.112 -0.383
15 262801_at AT1G21010 unknown 0.109 -0.530
16 251800_at AT3G55510 RBL, REBELOTE 0.106 0.206
17 259439_at AT1G01480 ACS2, 1-amino-cyclopropane-1-carboxylate synthase 2, AT-ACC2 0.101 -0.042
18 252939_at AT4G39230 [NmrA-like negative transcriptional regulator family protein] 0.101 -0.061
19 253743_at AT4G28940 [Phosphorylase superfamily protein] -0.280 0.146
20 256816_at AT3G21400 unknown -0.211 0.068
21 259171_at AT3G03590 [SWIB/MDM2 domain superfamily protein] -0.161 0.105
22 252215_at AT3G50240 KICP-02 -0.153 0.400
23 246817_at AT5G27240 [DNAJ heat shock N-terminal domain-containing protein] -0.149 0.417
24 264978_at AT1G27120 [Galactosyltransferase family protein] -0.147 0.062
25 247159_at AT5G65800 ACS5, ACC synthase 5, ATACS5, CIN5, CYTOKININ-INSENSITIVE 5, ETO2, ETHYLENE OVERPRODUCER 2 -0.136 0.003
26 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 -0.127 0.526
27 264187_at AT1G54860 [Glycoprotein membrane precursor GPI-anchored] -0.123 -0.129
28 249553_at AT5G38260 [Protein kinase superfamily protein] -0.117 -0.032
29 249507_at AT5G38370 [FUNCTIONS IN: zinc ion binding] -0.114 -0.009
30 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] -0.107 1.265
31 265255_at AT2G28420 GLYI8, glyoxylase I 8 -0.106 -0.115
32 266324_at AT2G46710 ROPGAP3, ROP guanosine triphosphatase (GTPase)-activating protein 3 -0.099 -0.179
33 246015_at AT5G10700 [Peptidyl-tRNA hydrolase II (PTH2) family protein] -0.099 -0.002
34 245959_at AT5G19640 [Major facilitator superfamily protein] -0.099 -0.083
35 246524_at AT5G15860 ATPCME, prenylcysteine methylesterase, ICME, Isoprenylcysteine methylesterase, PCME, prenylcysteine methylesterase -0.097 0.044