4.0:Information of module
AvrRpm1 2 h (leaf)
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 3.987e-42
GO:0002376 immune system process BP 1.168e-40
GO:0009719 response to endogenous stimulus BP 8.038e-40
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044711 single-organism biosynthetic process BP 1.943e-24
GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 2.749e-21
GO:0006081 cellular aldehyde metabolic process BP 2.177e-20
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
AvrRpm1 2 h (leaf)		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 263228_at AT1G30700 [FAD-binding Berberine family protein] 1.053 0.230
2 249197_at AT5G42380 CML37, calmodulin like 37 0.999 0.003
3 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.912 0.191
4 261474_at AT1G14540 PER4, peroxidase 4 0.875 0.422
5 264960_at AT1G76930 ATEXT1, EXTENSIN 1, ATEXT4, extensin 4, EXT1, extensin 1, EXT4, extensin 4, ORG5, OBP3-RESPONSIVE GENE 5 0.862 0.028
6 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.834 0.043
7 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.828 -0.147
8 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.826 -0.059
9 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.813 0.082
10 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.797 -0.096
11 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] 0.775 0.058
12 249045_at AT5G44380 [FAD-binding Berberine family protein] 0.773 -0.044
13 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.749 -0.027
14 252346_at AT3G48650 [pseudogene] 0.680 0.197
15 266975_at AT2G39380 ATEXO70H2, exocyst subunit exo70 family protein H2, EXO70H2, exocyst subunit exo70 family protein H2 0.664 -0.103
16 248322_at AT5G52760 [Copper transport protein family] 0.632 -0.112
17 250493_at AT5G09800 [ARM repeat superfamily protein] 0.624 0.221
18 258752_at AT3G09520 ATEXO70H4, exocyst subunit exo70 family protein H4, EXO70H4, exocyst subunit exo70 family protein H4 0.595 0.789
19 256044_at AT1G07160 [Protein phosphatase 2C family protein] 0.577 -0.015
20 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.577 0.005
21 260005_at AT1G67920 unknown 0.568 -0.150
22 260804_at AT1G78410 [VQ motif-containing protein] 0.564 -0.152
23 245363_at AT4G15120 [VQ motif-containing protein] 0.552 -0.075
24 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 0.518 -0.035
25 263411_at AT2G28710 [C2H2-type zinc finger family protein] 0.513 0.053
26 265008_at AT1G61560 ATMLO6, MILDEW RESISTANCE LOCUS O 6, MLO6, MILDEW RESISTANCE LOCUS O 6 0.510 0.340
27 246370_at AT1G51920 unknown 0.509 -0.036
28 252098_at AT3G51330 [Eukaryotic aspartyl protease family protein] 0.498 0.120
29 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.493 0.132
30 251096_at AT5G01550 LecRK-VI.3, L-type lectin receptor kinase VI.3, LECRKA4.2, lectin receptor kinase a4.1 0.488 -0.138
31 265359_at AT2G16720 ATMYB7, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, MYB7, myb domain protein 7 0.486 -0.002
32 254832_at AT4G12490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.485 0.109
33 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 0.485 -0.199
34 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.484 0.029
35 254543_at AT4G19810 ChiC, class V chitinase 0.477 0.013
36 259033_at AT3G09405 [Pectinacetylesterase family protein] 0.476 -0.056
37 252345_at AT3G48640 unknown 0.474 -0.026
38 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.471 0.086
39 263378_at AT2G40180 ATHPP2C5, phosphatase 2C5, PP2C5, phosphatase 2C5 0.468 -0.023
40 258203_at AT3G13950 unknown 0.462 0.033
41 247145_at AT5G65600 LecRK-IX.2, L-type lectin receptor kinase IX.2 0.460 -0.073
42 246988_at AT5G67340 [ARM repeat superfamily protein] 0.455 -0.056
43 256370_at AT1G66780 [MATE efflux family protein] 0.451 -0.108
44 254673_at AT4G18430 AtRABA1e, RAB GTPase homolog A1E, RABA1e, RAB GTPase homolog A1E 0.445 0.017
45 261242_at AT1G32960 ATSBT3.3, SBT3.3 0.442 0.083
46 262228_at AT1G68690 AtPERK9, proline-rich extensin-like receptor kinase 9, PERK9, proline-rich extensin-like receptor kinase 9 0.440 -0.042
47 249188_at AT5G42830 [HXXXD-type acyl-transferase family protein] 0.437 -0.150
48 256969_at AT3G21080 [ABC transporter-related] 0.436 0.183
49 249417_at AT5G39670 [Calcium-binding EF-hand family protein] 0.436 -0.004
50 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.434 0.112
51 264774_at AT1G22890 unknown 0.432 -0.122
52 245119_at AT2G41640 [Glycosyltransferase family 61 protein] 0.431 0.173
53 254869_at AT4G11890 ARCK1, ABA- AND OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1, CRK45, cysteine-rich receptor-like protein kinase 45 0.426 -0.049
54 259550_at AT1G35230 AGP5, arabinogalactan protein 5 0.423 0.035
55 255340_at AT4G04490 CRK36, cysteine-rich RLK (RECEPTOR-like protein kinase) 36 0.418 0.039
56 265387_at AT2G20670 unknown 0.418 0.083
57 264866_at AT1G24140 [Matrixin family protein] 0.417 0.059
58 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase 0.409 0.065
59 260648_at AT1G08050 [Zinc finger (C3HC4-type RING finger) family protein] 0.406 0.362
60 260276_at AT1G80450 [VQ motif-containing protein] 0.405 0.026
61 258349_at AT3G17609 HYH, HY5-homolog 0.404 -0.053
62 252303_at AT3G49210 [O-acyltransferase (WSD1-like) family protein] 0.399 -0.077
63 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.396 -0.064
64 260362_at AT1G70530 CRK3, cysteine-rich RLK (RECEPTOR-like protein kinase) 3 0.394 -0.106
65 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 0.394 0.089
66 264756_at AT1G61370 [S-locus lectin protein kinase family protein] 0.390 0.024
67 257951_at AT3G21700 ATSGP2, SGP2 0.379 0.046
68 265184_at AT1G23710 unknown 0.371 -0.059
69 259443_at AT1G02360 [Chitinase family protein] 0.366 0.171
70 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 0.363 -0.048
71 250267_at AT5G12930 unknown 0.357 0.037
72 258167_at AT3G21560 BRT1, Bright Trichomes 1, UGT84A2, UDP-glucosyl transferase 84A2 0.355 -0.114
73 252060_at AT3G52430 ATPAD4, ARABIDOPSIS PHYTOALEXIN DEFICIENT 4, PAD4, PHYTOALEXIN DEFICIENT 4 0.354 0.023
74 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.353 0.075
75 253392_at AT4G32650 ATKC1, ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, AtLKT1, A. thaliana low-K+-tolerant 1, KAT3, potassium channel in Arabidopsis thaliana 3, KC1 0.345 -0.095
76 258606_at AT3G02840 [ARM repeat superfamily protein] 0.340 -0.045
77 266100_at AT2G37980 [O-fucosyltransferase family protein] 0.335 0.175
78 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 0.333 0.073
79 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.332 0.073
80 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.597 -0.108
81 251402_at AT3G60290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.515 0.044
82 247730_at AT5G59580 UGT76E1, UDP-glucosyl transferase 76E1 -0.510 -0.163
83 247704_at AT5G59510 DVL18, DEVIL 18, RTFL5, ROTUNDIFOLIA like 5 -0.487 0.071
84 253943_at AT4G27030 FAD4, FATTY ACID DESATURASE 4, FADA, fatty acid desaturase A -0.352 -0.057
85 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] -0.308 0.275
86 266801_at AT2G22870 EMB2001, embryo defective 2001 -0.287 -0.072
87 250910_at AT5G03720 AT-HSFA3, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A3, HSFA3, heat shock transcription factor A3 -0.286 0.051
88 251669_at AT3G57180 BPG2, BRASSINAZOLE(BRZ) INSENSITIVE PALE GREEN 2 -0.276 0.203
89 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] -0.275 0.044
90 250585_at AT5G07620 [Protein kinase superfamily protein] -0.275 0.056
91 246019_at AT5G10690 [pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein] -0.269 -0.056
92 253020_at AT4G38020 [tRNA/rRNA methyltransferase (SpoU) family protein] -0.236 0.006
93 259348_at AT3G03770 [Leucine-rich repeat protein kinase family protein] -0.235 -0.010
94 255899_at AT1G17970 [RING/U-box superfamily protein] -0.234 -0.038
95 265823_at AT2G35760 [Uncharacterised protein family (UPF0497)] -0.230 0.002
96 256447_at AT1G33440 AtNPF4.4, NPF4.4, NRT1/ PTR family 4.4 -0.224 -0.378
97 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 -0.221 0.169
98 253251_at AT4G34730 RBF1, RbfA domain-containing protein 1 -0.212 0.097
99 261420_at AT1G07720 KCS3, 3-ketoacyl-CoA synthase 3 -0.211 -0.030
100 261937_at AT1G22570 [Major facilitator superfamily protein] -0.210 -0.086
101 247111_at AT5G65880 unknown -0.209 -0.113
102 260081_at AT1G78170 unknown -0.208 0.061
103 259227_at AT3G07750 [3'-5'-exoribonuclease family protein] -0.207 0.009
104 253638_at AT4G30470 [NAD(P)-binding Rossmann-fold superfamily protein] -0.200 -0.105
105 264704_at AT1G70090 GATL9, GALACTURONOSYLTRANSFERASE-LIKE 9, LGT8, glucosyl transferase family 8 -0.200 0.256
106 259430_at AT1G01610 ATGPAT4, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4, GPAT4, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4 -0.199 -0.043
107 257655_at AT3G13350 [HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain] -0.195 -0.081
108 265042_at AT1G04040 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.194 -0.031
109 266687_at AT2G19670 ATPRMT1A, ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1A, PRMT1A, protein arginine methyltransferase 1A -0.193 -0.042
110 257908_at AT3G25410 [Sodium Bile acid symporter family] -0.192 -0.125
111 263876_at AT2G21880 ATRAB7A, RAB GTPase homolog 7A, ATRABG2, ARABIDOPSIS RAB GTPASE HOMOLOG G2, RAB7A, RAB GTPase homolog 7A -0.190 -0.057
112 249069_at AT5G44010 unknown -0.188 0.091
113 253607_at AT4G30330 [Small nuclear ribonucleoprotein family protein] -0.188 0.146
114 264930_at AT1G60800 AtNIK3, NIK3, NSP-interacting kinase 3 -0.186 -0.037
115 249433_at AT5G39940 [FAD/NAD(P)-binding oxidoreductase family protein] -0.185 -0.161
116 251730_at AT3G56330 [N2,N2-dimethylguanosine tRNA methyltransferase] -0.178 -0.052
117 258025_at AT3G19480 3-PGDH, PGDH3, phosphoglycerate dehydrogenase 3 -0.177 -0.194
118 247533_at AT5G61570 [Protein kinase superfamily protein] -0.176 -0.006
119 254034_at AT4G25960 ABCB2, ATP-binding cassette B2, PGP2, P-glycoprotein 2 -0.175 -0.125
120 256626_at AT3G20015 [Eukaryotic aspartyl protease family protein] -0.175 -0.041
121 262458_at AT1G11280 [S-locus lectin protein kinase family protein] -0.174 0.075
122 263115_at AT1G03055 AtD27, A. thaliana homolog of rice D27, D27, DWARF27 -0.174 -0.003
123 249425_at AT5G39790 5'-AMP-activated protein kinase-related -0.173 -0.086
124 260645_at AT1G53300 TTL1, tetratricopeptide-repeat thioredoxin-like 1 -0.173 0.078
125 257759_at AT3G23070 ATCFM3A, CFM3A, CRM family member 3A -0.172 -0.001
126 247340_at AT5G63700 [zinc ion binding] -0.172 -0.041
127 262526_at AT1G17050 AtSPS2, SPS2, solanesyl diphosphate synthase 2 -0.170 0.046
128 253956_at AT4G26700 ATFIM1, ARABIDOPSIS THALIANA FIMBRIN 1, FIM1, fimbrin 1 -0.168 0.158
129 256070_at AT1G13730 [Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain] -0.161 -0.038
130 250053_at AT5G17850 [Sodium/calcium exchanger family protein] -0.161 -0.069
131 246313_at AT1G31920 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.159 -0.161
132 255447_at AT4G02790 EMB3129, EMBRYO DEFECTIVE 3129 -0.159 -0.089
133 262225_at AT1G53840 ATPME1, pectin methylesterase 1, PME1, pectin methylesterase 1 -0.158 0.104
134 254645_at AT4G18520 SEL1, SEEDLING LETHAL 1 -0.156 0.066
135 262754_at AT1G16350 [Aldolase-type TIM barrel family protein] -0.155 0.118
136 249347_at AT5G40830 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.155 -0.114
137 246317_at AT3G56900 [Transducin/WD40 repeat-like superfamily protein] -0.154 -0.183
138 259853_at AT1G72300 PSY1R, PSY1 receptor -0.154 0.040
139 254697_at AT4G17970 ALMT12, aluminum-activated, malate transporter 12, ATALMT12, QUAC1, quick-activating anion channel 1 -0.154 -0.265
140 250006_at AT5G18660 PCB2, PALE-GREEN AND CHLOROPHYLL B REDUCED 2 -0.152 -0.242
141 250146_at AT5G14660 ATDEF2, DEF2, PDF1B, peptide deformylase 1B -0.151 0.202
142 252612_at AT3G45160 [Putative membrane lipoprotein] -0.150 0.102
143 251741_at AT3G56040 UGP3, UDP-glucose pyrophosphorylase 3 -0.149 0.011
144 264910_at AT1G61100 [disease resistance protein (TIR class), putative] -0.148 0.035
145 256049_at AT1G07010 AtSLP1, SLP1, Shewenella-like protein phosphatase 1 -0.146 -0.088
146 265596_at AT2G20020 ATCAF1, CAF1 -0.144 0.185
147 245176_at AT2G47440 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.144 0.231
148 250582_at AT5G07580 [Integrase-type DNA-binding superfamily protein] -0.144 -0.110
149 250475_at AT5G10180 AST68, ARABIDOPSIS SULFATE TRANSPORTER 68, SULTR2;1, sulfate transporter 2;1 -0.143 -0.071
150 261277_at AT1G20230 [Pentatricopeptide repeat (PPR) superfamily protein] -0.143 -0.088
151 263207_at AT1G10550 XET, XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33, XTH33, xyloglucan:xyloglucosyl transferase 33 -0.143 -0.061
152 249554_at AT5G38290 [Peptidyl-tRNA hydrolase family protein] -0.142 0.047
153 253095_at AT4G37510 [Ribonuclease III family protein] -0.142 -0.122
154 260696_at AT1G32520 unknown -0.142 0.167
155 261608_at AT1G49650 [alpha/beta-Hydrolases superfamily protein] -0.140 -0.115
156 250589_at AT5G07700 AtMYB76, myb domain protein 76, MYB76, myb domain protein 76 -0.140 0.007
157 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] -0.140 0.038
158 255436_at AT4G03150 unknown -0.139 0.020