4.0:Information of module
Phaseolicola 2 h (leaf)
In comparison with ptpks2 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 6.334e-84
GO:0002376 immune system process BP 2.500e-83
GO:0010200 response to chitin BP 1.124e-78
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006816 calcium ion transport BP 1.285e-08
GO:0007030 Golgi organization BP 1.818e-08
GO:0010256 endomembrane system organization BP 1.289e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Phaseolicola 2 h (leaf)		 Log2 signal ratio
ptpks2
1 263228_at AT1G30700 [FAD-binding Berberine family protein] 0.979 -0.012
2 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.896 -0.240
3 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.884 -0.029
4 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.874 0.013
5 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.871 -0.088
6 264960_at AT1G76930 ATEXT1, EXTENSIN 1, ATEXT4, extensin 4, EXT1, extensin 1, EXT4, extensin 4, ORG5, OBP3-RESPONSIVE GENE 5 0.865 -0.129
7 261474_at AT1G14540 PER4, peroxidase 4 0.850 -0.156
8 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.836 -0.135
9 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 0.745 -0.124
10 266975_at AT2G39380 ATEXO70H2, exocyst subunit exo70 family protein H2, EXO70H2, exocyst subunit exo70 family protein H2 0.741 -0.227
11 251097_at AT5G01560 LecRK-VI.4, L-type lectin receptor kinase VI.4, LECRKA4.3, lectin receptor kinase a4.3 0.739 -0.176
12 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.709 -0.015
13 256044_at AT1G07160 [Protein phosphatase 2C family protein] 0.704 -0.008
14 246370_at AT1G51920 unknown 0.700 -0.054
15 248703_at AT5G48430 [Eukaryotic aspartyl protease family protein] 0.690 -0.171
16 264616_at AT2G17740 [Cysteine/Histidine-rich C1 domain family protein] 0.667 -0.039
17 265008_at AT1G61560 ATMLO6, MILDEW RESISTANCE LOCUS O 6, MLO6, MILDEW RESISTANCE LOCUS O 6 0.663 -0.187
18 251832_at AT3G55150 ATEXO70H1, exocyst subunit exo70 family protein H1, EXO70H1, exocyst subunit exo70 family protein H1 0.656 -0.014
19 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.656 -0.151
20 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.652 0.002
21 250493_at AT5G09800 [ARM repeat superfamily protein] 0.646 -0.007
22 260005_at AT1G67920 unknown 0.636 -0.080
23 247205_at AT5G64890 PROPEP2, elicitor peptide 2 precursor 0.636 -0.041
24 247610_at AT5G60630 unknown 0.627 -0.109
25 249045_at AT5G44380 [FAD-binding Berberine family protein] 0.624 -0.098
26 252364_at AT3G48450 [RPM1-interacting protein 4 (RIN4) family protein] 0.618 -0.037
27 263378_at AT2G40180 ATHPP2C5, phosphatase 2C5, PP2C5, phosphatase 2C5 0.613 0.049
28 254660_at AT4G18250 [receptor serine/threonine kinase, putative] 0.607 -0.098
29 251096_at AT5G01550 LecRK-VI.3, L-type lectin receptor kinase VI.3, LECRKA4.2, lectin receptor kinase a4.1 0.604 -0.024
30 245089_at AT2G45290 TKL2, transketolase 2 0.602 -0.163
31 260276_at AT1G80450 [VQ motif-containing protein] 0.589 -0.129
32 265359_at AT2G16720 ATMYB7, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7, ATY49, MYB7, myb domain protein 7 0.589 -0.215
33 260804_at AT1G78410 [VQ motif-containing protein] 0.588 0.163
34 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 0.580 -0.064
35 261394_at AT1G79680 ATWAKL10, WAKL10, WALL ASSOCIATED KINASE (WAK)-LIKE 10 0.576 0.033
36 247145_at AT5G65600 LecRK-IX.2, L-type lectin receptor kinase IX.2 0.574 0.074
37 246993_at AT5G67450 AZF1, zinc-finger protein 1, ZF1, zinc-finger protein 1 0.568 -0.040
38 254673_at AT4G18430 AtRABA1e, RAB GTPase homolog A1E, RABA1e, RAB GTPase homolog A1E 0.565 -0.031
39 265208_at AT2G36690 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.562 -0.185
40 248934_at AT5G46080 [Protein kinase superfamily protein] 0.561 -0.250
41 252346_at AT3G48650 [pseudogene] 0.554 -0.064
42 257978_at AT3G20860 ATNEK5, NIMA-related kinase 5, NEK5, NIMA-related kinase 5 0.552 -0.157
43 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.548 -0.071
44 248322_at AT5G52760 [Copper transport protein family] 0.538 0.143
45 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 0.529 0.197
46 254652_at AT4G18170 ATWRKY28, WRKY28, WRKY DNA-binding protein 28 0.523 -0.104
47 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase 0.523 -0.012
48 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 0.515 0.103
49 267384_at AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] 0.514 -0.148
50 248971_at AT5G45000 [Disease resistance protein (TIR-NBS-LRR class) family] 0.508 0.095
51 261836_at AT1G16090 WAKL7, wall associated kinase-like 7 0.505 -0.089
52 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.502 -0.105
53 249188_at AT5G42830 [HXXXD-type acyl-transferase family protein] 0.497 -0.050
54 251479_at AT3G59700 ATHLECRK, lectin-receptor kinase, HLECRK, lectin-receptor kinase, LecRK-V.5, L-type lectin receptor kinase V.5, LecRK-V.5, LEGUME-LIKE LECTIN RECEPTOR KINASE-V.5, LECRK1, LECTIN-RECEPTOR KINASE 1 0.495 -0.057
55 252098_at AT3G51330 [Eukaryotic aspartyl protease family protein] 0.493 0.090
56 247940_at AT5G57190 PSD2, phosphatidylserine decarboxylase 2 0.490 -0.092
57 265093_at AT1G03905 ABCI19, ATP-binding cassette I19 0.490 -0.132
58 259443_at AT1G02360 [Chitinase family protein] 0.489 -0.120
59 259033_at AT3G09405 [Pectinacetylesterase family protein] 0.487 -0.132
60 255342_at AT4G04510 CRK38, cysteine-rich RLK (RECEPTOR-like protein kinase) 38 0.487 0.104
61 252825_at AT4G39890 AtRABH1c, RAB GTPase homolog H1C, RABH1c, RAB GTPase homolog H1C 0.487 0.058
62 246988_at AT5G67340 [ARM repeat superfamily protein] 0.485 0.107
63 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.482 0.004
64 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.474 -0.111
65 254543_at AT4G19810 ChiC, class V chitinase 0.473 -0.009
66 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.466 -0.035
67 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.459 0.048
68 254575_at AT4G19460 [UDP-Glycosyltransferase superfamily protein] 0.457 -0.082
69 264467_at AT1G10140 [Uncharacterised conserved protein UCP031279] 0.456 -0.095
70 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 0.447 0.079
71 257951_at AT3G21700 ATSGP2, SGP2 0.446 -0.176
72 247487_at AT5G62150 [peptidoglycan-binding LysM domain-containing protein] 0.444 -0.032
73 262671_at AT1G76040 CPK29, calcium-dependent protein kinase 29 0.443 0.238
74 251790_at AT3G55470 [Calcium-dependent lipid-binding (CaLB domain) family protein] 0.443 0.042
75 258752_at AT3G09520 ATEXO70H4, exocyst subunit exo70 family protein H4, EXO70H4, exocyst subunit exo70 family protein H4 0.443 -0.040
76 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 0.441 -0.114
77 254869_at AT4G11890 ARCK1, ABA- AND OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1, CRK45, cysteine-rich receptor-like protein kinase 45 0.441 0.177
78 254060_at AT4G25350 SHB1, SHORT HYPOCOTYL UNDER BLUE1 0.436 -0.058
79 251950_at AT3G53600 [C2H2-type zinc finger family protein] 0.435 -0.066
80 264746_at AT1G62300 ATWRKY6, WRKY6 0.431 -0.055
81 252345_at AT3G48640 unknown 0.430 -0.050
82 264756_at AT1G61370 [S-locus lectin protein kinase family protein] 0.430 0.000
83 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.429 -0.015
84 258203_at AT3G13950 unknown 0.426 -0.015
85 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.422 0.065
86 249051_at AT5G44390 [FAD-binding Berberine family protein] 0.422 0.140
87 266596_at AT2G46150 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.421 -0.038
88 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.415 -0.060
89 264757_at AT1G61360 [S-locus lectin protein kinase family protein] 0.415 -0.017
90 262228_at AT1G68690 AtPERK9, proline-rich extensin-like receptor kinase 9, PERK9, proline-rich extensin-like receptor kinase 9 0.415 -0.144
91 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.413 0.034
92 258606_at AT3G02840 [ARM repeat superfamily protein] 0.412 -0.091
93 254647_at AT4G18540 unknown 0.412 -0.266
94 245193_at AT1G67810 SUFE2, sulfur E2 0.406 -0.006
95 248775_at AT5G47850 CCR4, CRINKLY4 related 4 0.404 -0.064
96 257583_at AT1G66480 [plastid movement impaired 2 (PMI2)] 0.403 0.040
97 249558_at AT5G38310 unknown 0.400 -0.232
98 260581_at AT2G47190 ATMYB2, MYB DOMAIN PROTEIN 2, MYB2, myb domain protein 2 0.394 -0.082
99 260362_at AT1G70530 CRK3, cysteine-rich RLK (RECEPTOR-like protein kinase) 3 0.393 0.078
100 263797_at AT2G24570 ATWRKY17, WRKY17, WRKY DNA-binding protein 17 0.392 -0.025
101 264866_at AT1G24140 [Matrixin family protein] 0.391 0.102
102 247740_at AT5G58940 CRCK1, calmodulin-binding receptor-like cytoplasmic kinase 1 0.391 -0.012
103 250267_at AT5G12930 unknown 0.390 -0.067
104 250918_at AT5G03610 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.382 0.201
105 257964_at AT3G19850 [Phototropic-responsive NPH3 family protein] -0.339 0.103
106 266279_at AT2G29290 [NAD(P)-binding Rossmann-fold superfamily protein] -0.251 -0.013
107 260347_at AT1G69420 [DHHC-type zinc finger family protein] -0.249 0.192
108 264209_at AT1G22740 ATRABG3B, RAB7, RAB75, RABG3B, RAB GTPase homolog G3B -0.247 -0.103
109 262598_at AT1G15260 unknown -0.244 0.053
110 261611_at AT1G49730 [Protein kinase superfamily protein] -0.243 0.086
111 261594_at AT1G33240 AT-GTL1, GT2-LIKE 1, ATGTL1, GTL1, GT-2-like 1 -0.239 0.049
112 258355_at AT3G14330 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.230 0.157
113 245460_at AT4G16990 RLM3, RESISTANCE TO LEPTOSPHAERIA MACULANS 3 -0.229 0.210
114 249493_at AT5G39080 [HXXXD-type acyl-transferase family protein] -0.226 0.115
115 265771_at AT2G48030 [DNAse I-like superfamily protein] -0.220 0.201
116 266187_at AT2G38970 [Zinc finger (C3HC4-type RING finger) family protein] -0.210 0.133
117 248890_at AT5G46270 [Disease resistance protein (TIR-NBS-LRR class) family] -0.206 0.072
118 252272_at AT3G49670 BAM2, BARELY ANY MERISTEM 2 -0.205 0.250
119 260799_at AT1G78270 AtUGT85A4, UDP-glucosyl transferase 85A4, UGT85A4, UDP-glucosyl transferase 85A4 -0.202 -0.156
120 253218_at AT4G34980 SLP2, subtilisin-like serine protease 2 -0.197 0.316
121 257510_at AT1G55360 unknown -0.196 0.115
122 256772_at AT3G13750 BGAL1, beta galactosidase 1, BGAL1, beta-galactosidase 1 -0.192 -0.086
123 255652_at AT4G00950 MEE47, maternal effect embryo arrest 47 -0.192 0.087
124 261772_at AT1G76240 unknown -0.188 0.009
125 258663_at AT3G08670 unknown -0.188 0.132
126 259300_at AT3G05100 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.179 0.084
127 251995_at AT3G52940 ELL1, EXTRA-LONG-LIFESPAN 1, FK, FACKEL, HYD2 -0.179 0.057
128 250189_at AT5G14410 unknown -0.177 0.127
129 255899_at AT1G17970 [RING/U-box superfamily protein] -0.177 -0.085
130 251714_at AT3G56370 [Leucine-rich repeat protein kinase family protein] -0.177 0.209
131 247153_at AT5G65700 BAM1, BARELY ANY MERISTEM 1 -0.175 0.116
132 256447_at AT1G33440 AtNPF4.4, NPF4.4, NRT1/ PTR family 4.4 -0.173 0.024
133 260790_at AT1G06240 unknown -0.170 0.036
134 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 -0.167 -0.089
135 263122_at AT1G78510 AtSPS1, SPS1, solanesyl diphosphate synthase 1 -0.166 0.022
136 257040_at AT3G19220 CYO1, SHI-YO-U MEANS COTYLEDON IN JAPANESE, SCO2, SNOWY COTYLEDON 2 -0.165 0.040
137 253216_at AT4G34960 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] -0.165 0.216
138 250613_at AT5G07240 IQD24, IQ-domain 24 -0.164 0.126
139 258368_at AT3G14240 [Subtilase family protein] -0.164 0.186
140 248046_at AT5G56040 SKM2, STERILITY-REGULATING KINASE MEMBER 2 -0.162 0.134
141 261597_at AT1G49780 PUB26, plant U-box 26 -0.162 0.090
142 261048_at AT1G01420 UGT72B3, UDP-glucosyl transferase 72B3 -0.160 -0.018
143 255788_at AT2G33310 IAA13, auxin-induced protein 13 -0.160 0.007
144 266131_at AT2G45160 ATHAM1, ARABIDOPSIS THALIANA HAIRY MERISTEM 1, HAM1, HAIRY MERISTEM 1, LOM1, LOST MERISTEMS 1 -0.159 0.207
145 259348_at AT3G03770 [Leucine-rich repeat protein kinase family protein] -0.158 0.227
146 248388_at AT5G51980 [Transducin/WD40 repeat-like superfamily protein] -0.158 -0.039
147 262667_at AT1G62810 CuAO1, COPPER AMINE OXIDASE1 -0.158 0.169
148 249392_at AT5G40150 [Peroxidase superfamily protein] -0.157 0.203
149 255885_at AT1G20330 CVP1, COTYLEDON VASCULAR PATTERN 1, FRL1, FRILL1, SMT2, sterol methyltransferase 2 -0.156 0.178
150 264782_at AT1G08810 AtMYB60, myb domain protein 60, MYB60, myb domain protein 60 -0.155 0.018
151 251095_at AT5G01510 RUS5, ROOT UV-B SENSITIVE 5 -0.155 0.066
152 246296_at AT3G56750 unknown -0.154 -0.101
153 245906_at AT5G11070 unknown -0.153 0.026
154 250649_at AT5G06690 WCRKC1, WCRKC thioredoxin 1 -0.152 -0.035
155 253957_at AT4G26320 AGP13, arabinogalactan protein 13 -0.152 -0.124
156 253021_at AT4G38050 [Xanthine/uracil permease family protein] -0.151 0.045
157 256967_at AT3G21060 RBL, RbBP5 LIKE -0.151 0.050
158 250761_at AT5G06050 [Putative methyltransferase family protein] -0.151 0.065
159 266896_at AT2G45810 [DEA(D/H)-box RNA helicase family protein] -0.150 0.111
160 254573_at AT4G19420 [Pectinacetylesterase family protein] -0.150 -0.088
161 260511_at AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein -0.150 0.082
162 266331_at AT2G01570 RGA, REPRESSOR OF GA, RGA1, REPRESSOR OF GA1-3 1 -0.150 0.116
163 263739_at AT2G21320 BBX18, B-box domain protein 18 -0.148 0.072
164 259358_at AT1G13250 GATL3, galacturonosyltransferase-like 3 -0.147 0.119
165 254564_at AT4G19170 CCD4, carotenoid cleavage dioxygenase 4, NCED4, nine-cis-epoxycarotenoid dioxygenase 4 -0.146 0.037
166 260266_at AT1G68520 BBX14, B-box domain protein 14 -0.146 0.036
167 247549_at AT5G61420 AtMYB28, HAG1, HIGH ALIPHATIC GLUCOSINOLATE 1, MYB28, myb domain protein 28, PMG1, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1 -0.145 0.074
168 260048_at AT1G73750 [Uncharacterised conserved protein UCP031088, alpha/beta hydrolase] -0.144 -0.050
169 259132_at AT3G02250 [O-fucosyltransferase family protein] -0.143 0.284
170 259373_at AT1G69160 unknown -0.142 -0.136
171 263252_at AT2G31380 BBX25, B-box domain protein 25, STH, salt tolerance homologue -0.141 0.091
172 248028_at AT5G55620 unknown -0.140 0.056
173 261055_at AT1G01300 [Eukaryotic aspartyl protease family protein] -0.140 0.245
174 259927_at AT1G75100 JAC1, J-domain protein required for chloroplast accumulation response 1 -0.140 -0.005
175 265880_at AT2G42300 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.139 0.184
176 250001_at AT5G18680 AtTLP11, tubby like protein 11, TLP11, tubby like protein 11 -0.138 0.114
177 257381_at AT2G37950 [RING/FYVE/PHD zinc finger superfamily protein] -0.136 -0.116
178 260167_at AT1G71970 unknown -0.135 -0.078
179 248273_at AT5G53500 [Transducin/WD40 repeat-like superfamily protein] -0.135 0.027
180 249964_at AT5G19010 MPK16, mitogen-activated protein kinase 16 -0.135 0.043
181 267065_at AT2G41080 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.134 -0.004
182 267619_at AT2G26730 [Leucine-rich repeat protein kinase family protein] -0.134 0.125
183 252661_at AT3G44450 unknown -0.132 0.187
184 249015_at AT5G44730 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.132 0.095
185 262170_at AT1G74940 unknown -0.131 -0.039
186 257655_at AT3G13350 [HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain] -0.131 -0.086
187 247288_at AT5G64330 JK218, NPH3, NON-PHOTOTROPIC HYPOCOTYL 3, RPT3, ROOT PHOTOTROPISM 3 -0.131 0.061
188 246439_at AT5G17600 [RING/U-box superfamily protein] -0.128 0.140
189 264191_at AT1G54730 [Major facilitator superfamily protein] -0.128 -0.128
190 259505_at AT1G15810 [S15/NS1, RNA-binding protein] -0.128 0.171
191 254982_at AT4G10470 unknown -0.128 0.031
192 259070_at AT3G11670 DGD1, DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 -0.127 0.088
193 261937_at AT1G22570 [Major facilitator superfamily protein] -0.127 -0.166
194 259909_at AT1G60870 MEE9, maternal effect embryo arrest 9 -0.127 0.124
195 257294_at AT3G15570 [Phototropic-responsive NPH3 family protein] -0.126 0.133
196 251343_at AT3G60620 CDS5, cytidinediphosphate diacylglycerol synthase 5 -0.126 0.014
197 245084_at AT2G23290 AtMYB70, myb domain protein 70, MYB70, myb domain protein 70 -0.126 0.032
198 253215_at AT4G34950 [Major facilitator superfamily protein] -0.126 0.130
199 260645_at AT1G53300 TTL1, tetratricopeptide-repeat thioredoxin-like 1 -0.125 0.035
200 264424_at AT1G61740 [Sulfite exporter TauE/SafE family protein] -0.125 -0.036
201 261049_at AT1G01430 TBL25, TRICHOME BIREFRINGENCE-LIKE 25 -0.124 0.016
202 252115_at AT3G51600 LTP5, lipid transfer protein 5 -0.124 0.025
203 255232_at AT4G05330 AGD13, ARF-GAP domain 13 -0.123 0.116
204 251225_at AT3G62660 GATL7, galacturonosyltransferase-like 7 -0.123 -0.044
205 267304_at AT2G30080 ATZIP6, ZIP6 -0.122 -0.091
206 246566_at AT5G14940 [Major facilitator superfamily protein] -0.122 -0.003
207 249750_at AT5G24570 unknown -0.122 0.057
208 258484_at AT3G02580 BUL1, BOULE 1, DWF7, DWARF 7, STE1, sterol 1 -0.122 0.150