4.0:Information of module
Mutant coi1(leaf)
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 8.538e-13
GO:0006081 cellular aldehyde metabolic process BP 1.588e-11
GO:0019362 pyridine nucleotide metabolic process BP 2.011e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009695 jasmonic acid biosynthetic process BP 6.768e-15
GO:0009694 jasmonic acid metabolic process BP 4.604e-13
GO:0009611 response to wounding BP 5.203e-13
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant coi1(leaf)		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.768 0.084
2 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.476 0.049
3 252314_at AT3G49400 [Transducin/WD40 repeat-like superfamily protein] 0.402 0.038
4 245162_at AT2G33240 ATXID, MYOSIN XI D, XID, myosin XI D 0.397 -0.110
5 253411_at AT4G32980 ATH1, homeobox gene 1 0.374 0.028
6 257129_at AT3G20100 CYP705A19, cytochrome P450, family 705, subfamily A, polypeptide 19 0.337 0.075
7 264909_at AT2G17300 unknown 0.334 0.109
8 251026_at AT5G02200 FHL, far-red-elongated hypocotyl1-like 0.330 -0.076
9 253943_at AT4G27030 FAD4, FATTY ACID DESATURASE 4, FADA, fatty acid desaturase A 0.315 -0.057
10 259375_at AT3G16370 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.301 0.027
11 249774_at AT5G24150 SQE5, SQUALENE MONOOXYGENASE 5, SQP1 0.280 -0.053
12 258055_at AT3G16250 NDF4, NDH-dependent cyclic electron flow 1, PnsB3, Photosynthetic NDH subcomplex B 3 0.276 0.150
13 258932_at AT3G10150 ATPAP16, PAP16, purple acid phosphatase 16 0.263 0.017
14 262414_at AT1G49430 LACS2, long-chain acyl-CoA synthetase 2, LRD2, LATERAL ROOT DEVELOPMENT 2 0.255 0.031
15 264078_at AT2G28470 BGAL8, beta-galactosidase 8 0.253 -0.025
16 255433_at AT4G03210 XTH9, xyloglucan endotransglucosylase/hydrolase 9 0.252 0.005
17 263442_at AT2G28605 [Photosystem II reaction center PsbP family protein] 0.244 -0.046
18 255779_at AT1G18650 PDCB3, plasmodesmata callose-binding protein 3 0.232 0.155
19 251586_at AT3G58070 GIS, GLABROUS INFLORESCENCE STEMS 0.230 0.435
20 267569_at AT2G30790 PSBP-2, photosystem II subunit P-2 0.227 -0.081
21 249410_at AT5G40380 CRK42, cysteine-rich RLK (RECEPTOR-like protein kinase) 42 0.226 -0.122
22 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 0.225 0.092
23 265128_at AT1G30860 [RING/U-box superfamily protein] 0.225 -0.028
24 262682_at AT1G75900 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.224 0.016
25 252366_at AT3G48420 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.224 0.029
26 258976_at AT3G01980 [NAD(P)-binding Rossmann-fold superfamily protein] 0.222 0.171
27 245088_at AT2G39850 [Subtilisin-like serine endopeptidase family protein] 0.222 0.213
28 260481_at AT1G10960 ATFD1, ferredoxin 1, FD1, ferredoxin 1 0.220 0.035
29 261222_at AT1G20120 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.216 -0.161
30 261927_at AT1G22500 AtATL15, Arabidopsis thaliana Arabidopsis toxicos en levadura 15, ATL15, Arabidopsis toxicos en levadura 15 0.215 0.119
31 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.212 -0.026
32 266778_at AT2G29090 CYP707A2, cytochrome P450, family 707, subfamily A, polypeptide 2 0.206 0.023
33 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 0.205 -0.199
34 256655_at AT3G18890 AtTic62, translocon at the inner envelope membrane of chloroplasts 62, Tic62, translocon at the inner envelope membrane of chloroplasts 62 0.204 -0.158
35 259308_at AT3G05180 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.203 0.027
36 261488_at AT1G14345 [NAD(P)-linked oxidoreductase superfamily protein] 0.203 0.032
37 263674_at AT2G04790 unknown 0.202 0.057
38 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 0.202 0.048
39 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 0.195 0.053
40 254250_at AT4G23290 CRK21, cysteine-rich RLK (RECEPTOR-like protein kinase) 21 0.193 -0.321
41 246159_at AT5G20935 CRR42, CHLORORESPIRATORY REDUCTION 42 0.192 -0.081
42 260364_at AT1G70560 CKRC1, cytokinin induced root curling 1, SAV3, SHADE AVOIDANCE 3, TAA1, tryptophan aminotransferase of Arabidopsis 1, WEI8, WEAK ETHYLENE INSENSITIVE 8 0.190 0.032
43 248956_at AT5G45610 SUV2, SENSITIVE TO UV 2 0.187 0.111
44 250933_at AT5G03170 ATFLA11, ARABIDOPSIS FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 11, FLA11, FASCICLIN-like arabinogalactan-protein 11 0.187 -0.122
45 256983_at AT3G13470 Cpn60beta2, chaperonin-60beta2 0.185 0.132
46 255453_at AT4G02900 [ERD (early-responsive to dehydration stress) family protein] 0.182 -0.082
47 257062_at AT3G18290 BTS, BRUTUS, EMB2454, embryo defective 2454 0.179 0.178
48 256386_at AT1G66540 [Cytochrome P450 superfamily protein] 0.178 -0.055
49 263038_at AT1G23270 unknown 0.175 -0.137
50 250926_at AT5G03555 AtNCS1, NCS1, nucleobase cation symporter 1 0.174 0.040
51 249070_at AT5G44030 CESA4, cellulose synthase A4, IRX5, IRREGULAR XYLEM 5, NWS2 0.174 -0.074
52 247483_at AT5G62420 [NAD(P)-linked oxidoreductase superfamily protein] 0.173 -0.022
53 262368_at AT1G73060 LPA3, Low PSII Accumulation 3 0.172 0.393
54 248651_at AT5G49260 unknown 0.170 -0.038
55 267169_at AT2G37540 [NAD(P)-binding Rossmann-fold superfamily protein] 0.170 0.022
56 251161_at AT3G63290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.169 -0.046
57 264340_at AT1G70280 [NHL domain-containing protein] 0.169 0.098
58 250075_at AT5G17670 [alpha/beta-Hydrolases superfamily protein] 0.168 0.050
59 248843_at AT5G46880 HB-7, homeobox-7, HDG5, HOMEODOMAIN GLABROUS 5 0.168 0.089
60 259081_at AT3G05030 ATNHX2, NHX2, sodium hydrogen exchanger 2 0.166 -0.123
61 259203_at AT3G09130 unknown 0.165 0.349
62 259742_at AT1G71120 GLIP6, GDSL-motif lipase/hydrolase 6 0.165 0.073
63 253518_at AT4G31400 AtCTF7, CTF7, CHROMOSOME TRANSMISSION FIDELITY 7, ECO1 0.164 -0.052
64 249052_at AT5G44420 LCR77, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, PDF1.2, plant defensin 1.2, PDF1.2A, PLANT DEFENSIN 1.2A -1.221 -0.128
65 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 -0.950 0.179
66 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] -0.627 -0.038
67 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 -0.623 -0.209
68 249743_at AT5G24540 BGLU31, beta glucosidase 31 -0.603 0.022
69 266989_at AT2G39330 JAL23, jacalin-related lectin 23 -0.587 -0.015
70 259383_at AT3G16470 JAL35, jacalin-related lectin 35, JR1, JASMONATE RESPONSIVE 1 -0.506 -0.156
71 261443_at AT1G28480 GRX480, roxy19 -0.477 -0.095
72 252200_at AT3G50280 [HXXXD-type acyl-transferase family protein] -0.470 -0.128
73 261713_at AT1G32640 ATMYC2, JAI1, JASMONATE INSENSITIVE 1, JIN1, JASMONATE INSENSITIVE 1, MYC2, RD22BP1, ZBF1 -0.445 -0.116
74 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 -0.424 -0.064
75 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A -0.405 0.111
76 256577_at AT3G28220 [TRAF-like family protein] -0.398 0.009
77 253458_at AT4G32070 Phox4, Phox4 -0.396 -0.039
78 267026_at AT2G38340 DREB19, dehydration response element-binding protein 19 -0.382 -0.032
79 245253_at AT4G15440 CYP74B2, HPL1, hydroperoxide lyase 1 -0.370 0.027
80 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 -0.361 0.025
81 254660_at AT4G18250 [receptor serine/threonine kinase, putative] -0.358 0.004
82 246550_at AT5G14920 GASA14, A-stimulated in Arabidopsis 14 -0.346 -0.040
83 252114_at AT3G51450 [Calcium-dependent phosphotriesterase superfamily protein] -0.343 -0.076
84 267518_at AT2G30500 NET4B, Networked 4B -0.321 -0.035
85 259730_at AT1G77660 [Histone H3 K4-specific methyltransferase SET7/9 family protein] -0.313 0.004
86 260425_at AT1G72440 EDA25, embryo sac development arrest 25, SWA2, SLOW WALKER2 -0.301 0.018
87 245041_at AT2G26530 AR781 -0.300 -0.226
88 260205_at AT1G70700 JAZ9, JASMONATE-ZIM-DOMAIN PROTEIN 9, TIFY7 -0.299 -0.213
89 255733_at AT1G25400 unknown -0.295 -0.266
90 248713_at AT5G48180 AtNSP5, NSP5, nitrile specifier protein 5 -0.293 -0.084
91 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 -0.290 0.235
92 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 -0.275 -0.140
93 250443_at AT5G10520 RBK1, ROP binding protein kinases 1 -0.265 0.154
94 258203_at AT3G13950 unknown -0.260 0.033
95 250875_at AT5G04020 [calmodulin binding] -0.258 0.017
96 265452_at AT2G46510 AIB, ABA-inducible BHLH-type transcription factor, ATAIB, ABA-inducible BHLH-type transcription factor, JAM1, JA-associated MYC2-like 1 -0.257 0.247
97 258245_at AT3G29075 [glycine-rich protein] -0.253 -0.029
98 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b -0.251 -0.198
99 249886_at AT5G22320 [Leucine-rich repeat (LRR) family protein] -0.233 -0.072
100 247954_at AT5G56870 BGAL4, beta-galactosidase 4 -0.229 -0.065
101 252199_at AT3G50270 [HXXXD-type acyl-transferase family protein] -0.229 -0.025
102 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase -0.226 0.026
103 255874_at AT2G40550 ETG1, E2F target gene 1 -0.215 -0.091
104 251643_at AT3G57550 AGK2, guanylate kinase, GK-2, GUANYLATE KINAS 2 -0.212 -0.083
105 248856_at AT5G46620 unknown -0.212 0.018
106 248971_at AT5G45000 [Disease resistance protein (TIR-NBS-LRR class) family] -0.210 0.096
107 260083_at AT1G63220 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.208 -0.048
108 257923_at AT3G23160 unknown -0.206 0.038
109 253162_at AT4G35630 PSAT1, phosphoserine aminotransferase 1 -0.205 -0.026
110 250179_at AT5G14440 [Surfeit locus protein 2 (SURF2)] -0.203 -0.155
111 252081_at AT3G51910 AT-HSFA7A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, HSFA7A, heat shock transcription factor A7A -0.202 -0.078
112 266072_at AT2G18700 ATTPS11, trehalose phosphatase/synthase 11, ATTPSB, TPS11, trehalose phosphatase/synthase 11, TPS11, TREHALOSE-6-PHOSPHATE SYNTHASE 11 -0.201 0.058
113 250264_at AT5G12890 [UDP-Glycosyltransferase superfamily protein] -0.194 -0.096
114 257321_at ATMG01130 ORF106F -0.193 -0.033
115 259749_at AT1G71100 RSW10, RADIAL SWELLING 10 -0.193 0.122
116 254432_at AT4G20830 [FAD-binding Berberine family protein] -0.192 0.030
117 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] -0.188 -0.005
118 263807_at AT2G04400 [Aldolase-type TIM barrel family protein] -0.184 0.046
119 260974_at AT1G53440 [Leucine-rich repeat transmembrane protein kinase] -0.178 -0.476
120 258278_at AT3G26860 [Plant self-incompatibility protein S1 family] -0.175 0.086
121 265627_at AT2G27285 [Coiled-coil domain-containing protein 55 (DUF2040)] -0.163 0.080
122 266802_at AT2G22900 [Galactosyl transferase GMA12/MNN10 family protein] -0.163 -0.070
123 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 -0.162 0.077
124 264756_at AT1G61370 [S-locus lectin protein kinase family protein] -0.162 0.024
125 262769_at AT1G13180 ARP3, ACTIN-RELATED PROTEIN 3, ATARP3, ARABIDOPSIS THALIANA ACTIN-RELATED PROTEIN 3, DIS1, DISTORTED TRICHOMES 1 -0.162 0.121