4.0:Information of module
Mutant arf2-6
In comparison with NAA -AA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006081 cellular aldehyde metabolic process BP 4.792e-24
GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 5.688e-24
GO:0015979 photosynthesis BP 2.313e-21
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901700 response to oxygen-containing compound BP 1.148e-09
GO:0042221 response to chemical BP 5.973e-08
GO:0001101 response to acid chemical BP 4.849e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant arf2-6		 Log2 signal ratio
NAA -AA
1 261046_at AT1G01390 [UDP-Glycosyltransferase superfamily protein] 0.606 -0.082
2 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.588 0.415
3 250868_at AT5G03860 MLS, malate synthase 0.569 -0.033
4 249053_at AT5G44440 [FAD-binding Berberine family protein] 0.569 0.013
5 257947_at AT3G21720 ICL, isocitrate lyase 0.469 -0.013
6 247486_at AT5G62140 unknown 0.435 -0.224
7 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 0.411 -0.147
8 256792_at AT3G22150 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.337 -0.283
9 262679_at AT1G75830 LCR67, low-molecular-weight cysteine-rich 67, PDF1.1, PLANT DEFENSIN 1.1 0.324 -0.017
10 245015_at ATCG00490 RBCL 0.277 -0.114
11 247487_at AT5G62150 [peptidoglycan-binding LysM domain-containing protein] 0.260 0.054
12 254663_at AT4G18290 KAT2, potassium channel in Arabidopsis thaliana 2 0.254 -0.056
13 246494_at AT5G16190 ATCSLA11, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A11, CSLA11, cellulose synthase like A11 0.245 -0.082
14 247100_at AT5G66520 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.239 -0.210
15 264041_at AT2G03710 AGL3, AGAMOUS-like 3, SEP4, SEPALLATA 4 0.217 -0.139
16 251466_at AT3G59340 unknown 0.216 0.008
17 252317_at AT3G48720 DCF, DEFICIENT IN CUTIN FERULATE 0.210 -0.309
18 247461_at AT5G62100 ATBAG2, BCL-2-associated athanogene 2, BAG2, BCL-2-associated athanogene 2 0.207 -0.033
19 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] 0.198 -0.168
20 247464_at AT5G62070 IQD23, IQ-domain 23 0.195 -0.109
21 244962_at ATCG01050 NDHD 0.195 -0.105
22 245009_at ATCG00380 RPS4, chloroplast ribosomal protein S4 0.182 -0.083
23 262373_at AT1G73120 unknown 0.180 -0.100
24 260237_at AT1G74430 ATMYB95, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 95, ATMYBCP66, ARABIDOPSIS THALIANA MYB DOMAIN CONTAINING PROTEIN 66, MYB95, myb domain protein 95 0.174 -0.113
25 249245_at AT5G42280 [Cysteine/Histidine-rich C1 domain family protein] 0.171 0.050
26 266279_at AT2G29290 [NAD(P)-binding Rossmann-fold superfamily protein] 0.170 -0.217
27 265699_at AT2G03550 [alpha/beta-Hydrolases superfamily protein] 0.166 -0.171
28 244998_at ATCG00180 RPOC1 0.165 -0.140
29 245006_at ATCG00340 PSAB 0.164 -0.055
30 250549_at AT5G07860 [HXXXD-type acyl-transferase family protein] 0.164 -0.150
31 267481_at AT2G02780 Leucine-rich repeat protein kinase family protein 0.161 0.083
32 267505_at AT2G45560 CYP76C1, cytochrome P450, family 76, subfamily C, polypeptide 1 0.160 -0.296
33 262830_at AT1G14700 ATPAP3, PAP3, purple acid phosphatase 3 0.160 -0.162
34 257744_at AT3G29230 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.154 -0.169
35 249773_at AT5G24140 SQP2, squalene monooxygenase 2 -0.615 -0.030
36 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 -0.540 -0.164
37 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A -0.513 0.064
38 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 -0.487 -0.164
39 246001_at AT5G20790 unknown -0.446 -0.087
40 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C -0.429 0.007
41 249675_at AT5G35940 [Mannose-binding lectin superfamily protein] -0.349 0.119
42 264872_at AT1G24260 AGL9, AGAMOUS-like 9, SEP3, SEPALLATA3 -0.341 -0.157
43 248729_at AT5G48010 AtTHAS1, Arabidopsis thaliana thalianol synthase 1, THAS, THALIANOL SYNTHASE, THAS1, thalianol synthase 1 -0.316 -0.177
44 263402_at AT2G04050 [MATE efflux family protein] -0.303 -0.034
45 252234_at AT3G49780 ATPSK3 (FORMER SYMBOL), ATPSK4, phytosulfokine 4 precursor, PSK4, phytosulfokine 4 precursor -0.282 -0.016
46 254059_at AT4G25200 ATHSP23.6-MITO, mitochondrion-localized small heat shock protein 23.6, HSP23.6-MITO, mitochondrion-localized small heat shock protein 23.6 -0.265 -0.065
47 249545_at AT5G38030 [MATE efflux family protein] -0.256 0.033
48 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] -0.247 -0.021
49 259846_at AT1G72140 [Major facilitator superfamily protein] -0.242 -0.042
50 256442_at AT3G10930 unknown -0.230 -0.272
51 263208_at AT1G10480 ZFP5, zinc finger protein 5 -0.229 0.056
52 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.217 -0.187
53 247691_at AT5G59720 HSP18.2, heat shock protein 18.2 -0.214 -0.079
54 263594_at AT2G01880 ATPAP7, PURPLE ACID PHOSPHATASE 7, PAP7, purple acid phosphatase 7 -0.212 0.121
55 266132_at AT2G45130 ATSPX3, ARABIDOPSIS THALIANA SPX DOMAIN GENE 3, SPX3, SPX domain gene 3 -0.209 -0.030
56 262616_at AT1G06620 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.209 -0.022
57 262887_at AT1G14780 [MAC/Perforin domain-containing protein] -0.208 0.275
58 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 -0.206 -0.003
59 258887_at AT3G05630 PDLZ2, PHOSPHOLIPASE D ZETA 2, PLDP2, phospholipase D P2, PLDZETA2, PHOSPHOLIPASE D ZETA 2 -0.201 0.036
60 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 -0.196 0.042
61 246093_at AT5G20550 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.192 0.213
62 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 -0.189 -0.158
63 252539_at AT3G45730 unknown -0.182 0.123
64 254574_at AT4G19430 unknown -0.179 0.012
65 259015_at AT3G07350 unknown -0.169 -0.080
66 254839_at AT4G12400 Hop3, Hop3 -0.166 0.161
67 266259_at AT2G27830 unknown -0.165 -0.035