4.0:Information of module
Mutant arf2 (etiol)
In comparison with Col-0 ozone help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 6.632e-28
GO:0050896 response to stimulus BP 5.930e-25
GO:1901700 response to oxygen-containing compound BP 1.022e-24
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 1.468e-12
GO:0009926 auxin polar transport BP 2.788e-12
GO:0009914 hormone transport BP 3.936e-12
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant arf2 (etiol)		 Log2 signal ratio
Col-0 ozone
1 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.916 8.568
2 261020_at AT1G26390 [FAD-binding Berberine family protein] 0.840 4.267
3 261475_at AT1G14550 [Peroxidase superfamily protein] 0.838 1.581
4 245567_at AT4G14630 GLP9, germin-like protein 9 0.806 0.076
5 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.785 7.068
6 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 0.765 6.198
7 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.731 7.876
8 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0.708 1.716
9 261474_at AT1G14540 PER4, peroxidase 4 0.704 7.851
10 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 0.698 9.379
11 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.666 6.978
12 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.612 -1.137
13 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.608 5.742
14 260015_at AT1G67980 CCOAMT, caffeoyl-CoA 3-O-methyltransferase 0.591 5.323
15 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A 0.588 3.884
16 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.580 1.715
17 254203_at AT4G24150 AtGRF8, growth-regulating factor 8, GRF8, growth-regulating factor 8 0.573 0.921
18 259352_at AT3G05170 [Phosphoglycerate mutase family protein] 0.552 0.471
19 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.548 4.076
20 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.512 0.717
21 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.502 6.938
22 245041_at AT2G26530 AR781 0.501 3.634
23 249097_at AT5G43520 [Cysteine/Histidine-rich C1 domain family protein] 0.500 -0.041
24 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 0.477 2.890
25 246099_at AT5G20230 ATBCB, blue-copper-binding protein, BCB, BLUE COPPER BINDING PROTEIN, BCB, blue-copper-binding protein, SAG14, SENESCENCE ASSOCIATED GENE 14 0.471 6.638
26 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.470 5.664
27 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.459 4.800
28 266965_at AT2G39510 UMAMIT14, Usually multiple acids move in and out Transporters 14 0.454 0.363
29 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 0.449 7.415
30 261135_at AT1G19610 LCR78, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 0.445 2.291
31 263402_at AT2G04050 [MATE efflux family protein] 0.433 2.322
32 245352_at AT4G15490 UGT84A3 0.430 -0.111
33 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] 0.422 2.245
34 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.408 5.041
35 266209_at AT2G27550 ATC, centroradialis 0.403 -0.041
36 267384_at AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] 0.399 5.004
37 260239_at AT1G74360 [Leucine-rich repeat protein kinase family protein] 0.398 5.430
38 250633_at AT5G07460 ATMSRA2, ARABIDOPSIS THALIANA METHIONINE SULFOXIDE REDUCTASE 2, PMSR2, peptidemethionine sulfoxide reductase 2 0.396 0.681
39 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase 0.394 6.306
40 261542_at AT1G63560 [Receptor-like protein kinase-related family protein] 0.391 -0.041
41 265411_at AT2G16630 [Pollen Ole e 1 allergen and extensin family protein] 0.388 0.061
42 249575_at AT5G37670 [HSP20-like chaperones superfamily protein] 0.388 0.772
43 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.380 4.439
44 260744_at AT1G15010 unknown 0.369 2.290
45 258002_at AT3G28930 AIG2, AVRRPT2-INDUCED GENE 2 0.368 4.375
46 248703_at AT5G48430 [Eukaryotic aspartyl protease family protein] 0.364 2.192
47 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 0.362 -0.605
48 253911_at AT4G27300 [S-locus lectin protein kinase family protein] 0.360 3.362
49 251847_at AT3G54640 TRP3, TRYPTOPHAN-REQUIRING 3, TSA1, tryptophan synthase alpha chain 0.350 2.574
50 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] 0.346 4.370
51 264716_at AT1G70170 MMP, matrix metalloproteinase 0.344 6.923
52 261838_at AT1G16030 Hsp70b, heat shock protein 70B 0.343 -0.421
53 258746_at AT3G05950 [RmlC-like cupins superfamily protein] 0.337 -0.041
54 266326_at AT2G46650 ATCB5-C, ARABIDOPSIS CYTOCHROME B5 ISOFORM C, B5 #1, CB5-C, cytochrome B5 isoform C, CYTB5-C 0.336 0.027
55 255648_at AT4G00910 [Aluminium activated malate transporter family protein] 0.336 0.164
56 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.335 5.279
57 258342_at AT3G22800 [Leucine-rich repeat (LRR) family protein] 0.334 -0.042
58 267588_at AT2G42060 [Cysteine/Histidine-rich C1 domain family protein] 0.330 1.430
59 253113_at AT4G35985 [Senescence/dehydration-associated protein-related] 0.328 0.436
60 256024_at AT1G58340 BCD1, BUSH-AND-CHLOROTIC-DWARF 1, ZF14, ZRZ, ZRIZI 0.326 3.134
61 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.326 7.995
62 250475_at AT5G10180 AST68, ARABIDOPSIS SULFATE TRANSPORTER 68, SULTR2;1, sulfate transporter 2;1 0.322 -0.315
63 263126_at AT1G78460 [SOUL heme-binding family protein] 0.321 1.964
64 256221_at AT1G56300 [Chaperone DnaJ-domain superfamily protein] 0.319 2.873
65 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 0.318 7.334
66 261956_at AT1G64590 [NAD(P)-binding Rossmann-fold superfamily protein] 0.315 -0.041
67 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 0.311 3.073
68 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 0.308 6.886
69 245148_at AT2G45220 PME17, pectin methylesterase 17 0.308 5.125
70 259553_x_at AT1G21310 ATEXT3, extensin 3, EXT3, extensin 3, RSH, ROOT-SHOOT-HYPOCOTYL DEFECTIVE 0.306 2.237
71 260522_x_at AT2G41730 unknown 0.304 3.427
72 266168_at AT2G38870 [Serine protease inhibitor, potato inhibitor I-type family protein] 0.302 3.543
73 251248_at AT3G62150 ABCB21, ATP-binding cassette B21, PGP21, P-glycoprotein 21 0.302 5.761
74 252222_at AT3G49845 WIH3, WINDHOSE 3 0.293 5.422
75 256354_at AT1G54870 [NAD(P)-binding Rossmann-fold superfamily protein] 0.289 -0.041
76 257197_at AT3G23800 SBP3, selenium-binding protein 3 0.286 0.332
77 264042_at AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 0.284 0.995
78 249918_at AT5G19240 [Glycoprotein membrane precursor GPI-anchored] 0.282 2.961
79 263935_at AT2G35930 AtPUB23, PUB23, plant U-box 23 0.281 4.960
80 258901_at AT3G05640 [Protein phosphatase 2C family protein] 0.280 -1.278
81 264757_at AT1G61360 [S-locus lectin protein kinase family protein] 0.279 5.356
82 252515_at AT3G46230 ATHSP17.4, ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.4, HSP17.4, heat shock protein 17.4 0.278 -0.040
83 267263_at AT2G23110 [Late embryogenesis abundant protein, group 6] 0.276 -0.041
84 251245_at AT3G62090 PIF6, PHYTOCHROME-INTERACTING FACTOR 6, PIL2, phytochrome interacting factor 3-like 2 0.273 1.066
85 266167_at AT2G38860 DJ-1e, DJ1E, YLS5 0.268 3.658
86 259653_at AT1G55240 unknown -0.828 4.838
87 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.805 -0.041
88 264404_at AT2G25160 CYP82F1, cytochrome P450, family 82, subfamily F, polypeptide 1 -0.717 0.332
89 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 -0.644 0.102
90 253040_at AT4G37800 XTH7, xyloglucan endotransglucosylase/hydrolase 7 -0.602 -1.662
91 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE -0.586 1.427
92 260869_at AT1G43800 FTM1, FLORAL TRANSITION AT THE MERISTEM1, SAD6, STEAROYL-ACYL CARRIER PROTEIN Δ9-DESATURASE6 -0.509 0.838
93 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] -0.478 1.645
94 254648_at AT4G18550 AtDSEL, Arabidopsis thaliana DAD1-like seeding establishment-related lipase, DSEL, DAD1-like seeding establishment-related lipase -0.477 1.294
95 245226_at AT3G29970 [B12D protein] -0.470 -0.251
96 248028_at AT5G55620 unknown -0.447 -1.647
97 250467_at AT5G10100 TPPI, trehalose-6-phosphate phosphatase I -0.443 1.222
98 247882_at AT5G57785 unknown -0.439 -0.938
99 245422_at AT4G17470 [alpha/beta-Hydrolases superfamily protein] -0.432 0.376
100 250446_at AT5G10770 [Eukaryotic aspartyl protease family protein] -0.424 -0.253
101 248728_at AT5G48000 CYP708 A2, CYTOCHROME P450, FAMILY 708, SUBFAMILY A, POLYPEPTIDE 2, CYP708A2, cytochrome P450, family 708, subfamily A, polypeptide 2, THAH, THALIANOL HYDROXYLASE, THAH1, THALIANOL HYDROXYLASE 1 -0.413 0.891
102 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 -0.410 1.113
103 262121_at AT1G02800 ATCEL2, cellulase 2, CEL2, CEL2, cellulase 2 -0.408 0.004
104 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -0.390 -0.039
105 266996_at AT2G34490 CYP710A2, cytochrome P450, family 710, subfamily A, polypeptide 2 -0.383 0.010
106 251977_at AT3G53250 SAUR57, SMALL AUXIN UPREGULATED RNA 57 -0.383 0.254
107 249010_at AT5G44580 unknown -0.383 1.372
108 264157_at AT1G65310 ATXTH17, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, XTH17, xyloglucan endotransglucosylase/hydrolase 17 -0.356 -1.417
109 259133_at AT3G05400 [Major facilitator superfamily protein] -0.354 -2.204
110 257130_at AT3G20210 DELTA-VPE, delta vacuolar processing enzyme, DELTAVPE, DELTA VACUOLAR PROCESSING ENZYME -0.349 -0.714
111 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 -0.348 -0.041
112 254649_at AT4G18570 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.341 -1.294
113 251509_at AT3G59010 PME35, pectin methylesterase 35, PME61, pectin methylesterase 61 -0.340 -0.396
114 247252_at AT5G64770 CLEL 9, CLE-like 9, GLV2, GOLVEN 2, RGF9, root meristem growth factor 9 -0.338 -2.434
115 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] -0.334 -1.664
116 261942_at AT1G22590 AGL87, AGAMOUS-like 87 -0.326 -0.729
117 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 -0.326 -2.758
118 264442_at AT1G27480 [alpha/beta-Hydrolases superfamily protein] -0.326 -1.284
119 264016_at AT2G21220 SAUR12, SMALL AUXIN UPREGULATED RNA 12 -0.320 -2.051
120 265083_at AT1G03820 unknown -0.311 -0.998
121 245076_at AT2G23170 GH3.3 -0.305 0.176
122 267101_at AT2G41480 AtPRX25, PRX25, peroxidase 25 -0.297 -1.328
123 248888_at AT5G46240 AtKAT1, KAT1, potassium channel in Arabidopsis thaliana 1 -0.289 -0.477
124 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 -0.288 -0.497
125 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 -0.287 -3.875
126 262795_at AT1G13130 [Cellulase (glycosyl hydrolase family 5) protein] -0.287 -0.612
127 267485_at AT2G02820 AtMYB88, myb domain protein 88, MYB88, myb domain protein 88 -0.284 -0.368
128 253480_at AT4G31840 AtENODL15, ENODL15, early nodulin-like protein 15 -0.283 -0.033
129 246002_at AT5G20740 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.282 -0.513
130 252248_at AT3G49750 AtRLP44, receptor like protein 44, RLP44, receptor like protein 44 -0.272 -0.330
131 246860_at AT5G25840 unknown -0.265 -0.140
132 255807_at AT4G10270 [Wound-responsive family protein] -0.264 1.194
133 246877_at AT5G26150 [protein kinase family protein] -0.260 -0.041
134 263528_at AT2G24800 [Peroxidase superfamily protein] -0.260 -0.340
135 246487_at AT5G16030 unknown -0.259 -2.442
136 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 -0.259 -1.407
137 264745_at AT1G62180 5'adenylylphosphosulfate reductase 2 -0.258 -0.404
138 247582_at AT5G60760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.258 1.567
139 254313_at AT4G22460 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.256 0.332
140 249037_at AT5G44130 FLA13, FASCICLIN-like arabinogalactan protein 13 precursor -0.256 -1.053
141 256825_at AT3G22120 CWLP, cell wall-plasma membrane linker protein -0.255 0.022
142 251791_at AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 -0.252 1.047
143 258530_at AT3G06840 unknown -0.251 -0.599
144 265454_at AT2G46530 ARF11, auxin response factor 11 -0.250 0.086
145 254119_at AT4G24780 [Pectin lyase-like superfamily protein] -0.248 -1.693
146 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 -0.247 2.584
147 259892_at AT1G72610 ATGER1, A. THALIANA GERMIN-LIKE PROTEIN 1, GER1, germin-like protein 1, GLP1, GERMIN-LIKE PROTEIN 1 -0.241 -1.990
148 248245_at AT5G53190 AtSWEET3, SWEET3 -0.240 -0.041
149 264469_at AT1G67100 LBD40, LOB domain-containing protein 40 -0.238 1.574
150 262260_at AT1G70850 MLP34, MLP-like protein 34 -0.235 0.875
151 251827_at AT3G55120 A11, AtCHI, CFI, CHALCONE FLAVANONE ISOMERASE, CHI, chalcone isomerase, TT5, TRANSPARENT TESTA 5 -0.234 -0.962
152 250070_at AT5G17980 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.234 -0.433
153 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.234 -0.510
154 260438_at AT1G68290 ENDO2, endonuclease 2 -0.231 1.816
155 256427_at AT3G11090 LBD21, LOB domain-containing protein 21 -0.231 -0.876
156 253270_at AT4G34160 CYCD3, CYCD3;1, CYCLIN D3;1 -0.228 -0.519
157 247151_at AT5G65640 bHLH093, beta HLH protein 93 -0.228 0.282
158 267359_at AT2G40020 [Nucleolar histone methyltransferase-related protein] -0.226 -0.527
159 266179_at AT2G02300 AtPP2-B5, phloem protein 2-B5, PP2-B5, phloem protein 2-B5 -0.225 -0.041
160 247880_at AT5G57780 P1R1, P1R1 -0.224 -1.651
161 252004_at AT3G52780 ATPAP20, PAP20 -0.224 0.332
162 253720_at AT4G29270 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.222 -0.288
163 258589_at AT3G04290 ATLTL1, LTL1, Li-tolerant lipase 1 -0.221 -1.061
164 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 -0.218 -3.838
165 266309_at AT2G27140 [HSP20-like chaperones superfamily protein] -0.218 0.415
166 252863_at AT4G39800 ATIPS1, INOSITOL 3-PHOSPHATE SYNTHASE 1, ATMIPS1, MYO-INOSITOL-1-PHOSPHATE SYNTHASE 1, MI-1-P SYNTHASE, MIPS1, D-myo-Inositol 3-Phosphate Synthase 1, MIPS1, myo-inositol-1-phosphate synthase 1 -0.217 -0.887
167 260528_at AT2G47260 ATWRKY23, WRKY DNA-BINDING PROTEIN 23, WRKY23, WRKY DNA-binding protein 23 -0.216 0.022
168 259209_at AT3G09160 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.216 -1.472
169 247657_at AT5G59845 [Gibberellin-regulated family protein] -0.216 0.028