4.0:Information of module
Mutant tga2_5_6
In comparison with root - 04% oxygen - 2h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009627 systemic acquired resistance BP 8.651e-19
GO:0009814 defense response, incompatible interacti... BP 2.404e-18
GO:0006955 immune response BP 7.020e-18
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019748 secondary metabolic process BP 2.130e-07
GO:0009407 toxin catabolic process BP 2.853e-06
GO:0090487 secondary metabolite catabolic process BP 2.853e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant tga2_5_6		 Log2 signal ratio
root - 04% oxygen - 2h
1 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA 0.854 -0.003
2 250942_at AT5G03350 [Legume lectin family protein] 0.817 -0.099
3 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 0.733 -0.074
4 261221_at AT1G19960 unknown 0.626 -0.104
5 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 0.556 0.007
6 249205_at AT5G42600 MRN1, marneral synthase 1 0.549 0.129
7 250302_at AT5G11920 AtcwINV6, 6-&1-fructan exohydrolase, cwINV6, 6-&1-fructan exohydrolase 0.505 -0.024
8 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.492 -0.028
9 248169_at AT5G54610 ANK, ankyrin, BDA1, bian da 2 (becoming big in Chinese) 0.483 -0.023
10 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 0.474 0.026
11 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] 0.467 -0.014
12 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.437 -0.034
13 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] 0.431 -0.037
14 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.430 -0.183
15 254416_at AT4G21380 ARK3, receptor kinase 3, RK3, receptor kinase 3 0.400 -0.150
16 249295_at AT5G41280 [Receptor-like protein kinase-related family protein] 0.384 -0.079
17 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 0.375 -0.019
18 264843_at AT1G03400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.372 -0.108
19 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.372 0.116
20 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 0.371 -0.066
21 256497_at AT1G31580 CXC750, ECS1 0.369 -0.376
22 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 0.358 0.007
23 259251_at AT3G07600 [Heavy metal transport/detoxification superfamily protein ] 0.357 -0.150
24 247476_at AT5G62330 unknown 0.337 -0.231
25 245550_at AT4G15330 CYP705A1, cytochrome P450, family 705, subfamily A, polypeptide 1 0.332 0.039
26 251673_at AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 0.331 -0.011
27 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.331 -0.091
28 250344_at AT5G11930 [Thioredoxin superfamily protein] 0.314 -0.005
29 260211_at AT1G74440 unknown 0.313 -0.053
30 262743_at AT1G29020 [Calcium-binding EF-hand family protein] 0.312 -0.075
31 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] 0.311 -0.054
32 259550_at AT1G35230 AGP5, arabinogalactan protein 5 0.308 -0.023
33 248062_at AT5G55450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.298 -0.087
34 249485_at AT5G39020 [Malectin/receptor-like protein kinase family protein] 0.291 0.015
35 253997_at AT4G26090 RPS2, RESISTANT TO P. SYRINGAE 2 0.290 -0.036
36 259897_at AT1G71380 ATCEL3, cellulase 3, ATGH9B3, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B3, CEL3, cellulase 3 0.284 0.031
37 263402_at AT2G04050 [MATE efflux family protein] 0.283 -0.005
38 256366_at AT1G66880 [Protein kinase superfamily protein] 0.282 0.184
39 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 0.281 -0.026
40 265611_at AT2G25510 unknown 0.275 -0.272
41 262705_at AT1G16260 [Wall-associated kinase family protein] 0.273 -0.018
42 249188_at AT5G42830 [HXXXD-type acyl-transferase family protein] 0.271 -0.090
43 255702_at AT4G00230 XSP1, xylem serine peptidase 1 0.266 0.068
44 256602_at AT3G28310 unknown 0.261 -0.024
45 249773_at AT5G24140 SQP2, squalene monooxygenase 2 0.257 0.201
46 244999_at ATCG00190 RPOB, RNA polymerase subunit beta 0.252 -0.025
47 267496_at AT2G30550 DALL3, DAD1-Like Lipase 3 0.248 -0.016
48 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 0.245 -0.048
49 253191_at AT4G35350 XCP1, xylem cysteine peptidase 1 0.244 -0.008
50 245611_at AT4G14390 [Ankyrin repeat family protein] 0.243 -0.056
51 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 0.236 -0.031
52 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.235 0.039
53 250828_at AT5G05250 unknown 0.233 0.058
54 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.229 0.072
55 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.227 0.026
56 258813_at AT3G04060 anac046, NAC domain containing protein 46, NAC046, NAC domain containing protein 46 0.227 -0.100
57 249055_at AT5G44460 CML43, calmodulin like 43 0.226 -0.014
58 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.226 -0.062
59 260179_at AT1G70690 HWI1, HOPW1-1-INDUCED GENE1, PDLP5, PLASMODESMATA-LOCATED PROTEIN 5 0.223 -0.011
60 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.223 -0.043
61 253827_at AT4G28085 unknown 0.220 -0.044
62 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] 0.220 -0.048
63 262796_at AT1G20850 XCP2, xylem cysteine peptidase 2 0.219 -0.003
64 252170_at AT3G50480 HR4, homolog of RPW8 4 0.217 -0.040
65 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 0.210 0.007
66 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 0.207 0.009
67 251704_at AT3G56360 unknown 0.206 0.025
68 246121_at AT5G20370 [serine-rich protein-related] 0.205 -0.009
69 262507_at AT1G11330 [S-locus lectin protein kinase family protein] 0.204 0.079
70 249439_at AT5G40020 [Pathogenesis-related thaumatin superfamily protein] 0.202 -0.042
71 261598_at AT1G49750 [Leucine-rich repeat (LRR) family protein] 0.199 0.031
72 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.198 -0.104
73 245000_at ATCG00210 YCF6 0.198 -0.011
74 263478_at AT2G31880 EVR, EVERSHED, SOBIR1, SUPPRESSOR OF BIR1 1 0.198 0.001
75 255852_at AT1G66970 GDPDL1, Glycerophosphodiester phosphodiesterase (GDPD) like 1, SVL2, SHV3-like 2 0.197 0.031
76 252447_at AT3G47040 [Glycosyl hydrolase family protein] 0.197 -0.063
77 260558_at AT2G43600 [Chitinase family protein] 0.196 -0.033
78 260419_at AT1G69730 [Wall-associated kinase family protein] 0.192 0.043
79 245074_at AT2G23200 [Protein kinase superfamily protein] 0.191 0.033
80 256935_at AT3G22570 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.191 0.040
81 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 0.188 0.001
82 248092_at AT5G55170 ATSUMO3, SUM3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO 3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO3, small ubiquitin-like modifier 3 0.185 0.010
83 252346_at AT3G48650 [pseudogene] 0.181 -0.028
84 250655_at AT5G06960 OBF5, OCS-element binding factor 5, TGA5, TGACG MOTIF-BINDING FACTOR 5 -0.912 0.008
85 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 -0.707 -0.038
86 250671_at AT5G06950 AHBP-1B, TGA2, TGACG sequence-specific binding protein 2 -0.653 -0.012
87 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] -0.637 -0.024
88 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 -0.597 -0.060
89 257823_at AT3G25190 [Vacuolar iron transporter (VIT) family protein] -0.591 -0.019
90 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform -0.559 -0.154
91 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 -0.551 -0.115
92 258033_at AT3G21250 ABCC8, ATP-binding cassette C8, ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6 -0.548 0.030
93 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 -0.533 -0.074
94 260189_at AT1G67550 URE, urease -0.533 0.037
95 249599_at AT5G37990 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.501 -0.005
96 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.487 0.003
97 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 -0.486 -0.106
98 262935_at AT1G79410 AtOCT5, organic cation/carnitine transporter5, OCT5, organic cation/carnitine transporter5 -0.485 -0.067
99 257216_at AT3G14990 AtDJ1A, DJ-1 homolog A, DJ-1a, DJ1A, DJ-1 homolog A -0.480 -0.002
100 266296_at AT2G29420 ATGSTU7, glutathione S-transferase tau 7, GST25, GLUTATHIONE S-TRANSFERASE 25, GSTU7, glutathione S-transferase tau 7 -0.480 -0.029
101 256269_at AT3G12250 BZIP45, TGA6, TGACG motif-binding factor 6 -0.471 0.048
102 259548_at AT1G35260 MLP165, MLP-like protein 165 -0.450 -0.018
103 267382_at AT2G44300 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.446 -0.074
104 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 -0.419 -0.076
105 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 -0.417 -0.013
106 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.417 -0.172
107 264016_at AT2G21220 SAUR12, SMALL AUXIN UPREGULATED RNA 12 -0.408 -0.002
108 254759_at AT4G13180 [NAD(P)-binding Rossmann-fold superfamily protein] -0.385 -0.049
109 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 -0.375 -0.002
110 255543_at AT4G01870 [tolB protein-related] -0.373 -0.062
111 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 -0.356 -0.039
112 260592_at AT1G55850 ATCSLE1, CSLE1, cellulose synthase like E1 -0.350 -0.030
113 255666_at AT4G00390 [DNA-binding storekeeper protein-related transcriptional regulator] -0.342 0.020
114 264872_at AT1G24260 AGL9, AGAMOUS-like 9, SEP3, SEPALLATA3 -0.339 -0.024
115 251968_at AT3G53100 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.337 -0.025
116 260813_at AT1G43700 SUE3, sulphate utilization efficiency 3, VIP1, VIRE2-interacting protein 1 -0.337 0.048
117 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 -0.328 -0.015
118 263959_at AT2G36210 SAUR45, SMALL AUXIN UPREGULATED RNA 45 -0.315 0.050
119 260135_at AT1G66400 CML23, calmodulin like 23 -0.306 -0.086
120 254512_at AT4G20230 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.305 -0.044
121 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] -0.304 -0.041
122 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.304 -0.025
123 263668_at AT1G04350 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.303 0.138
124 247024_at AT5G66985 unknown -0.298 0.320
125 247447_at AT5G62730 [Major facilitator superfamily protein] -0.294 -0.029
126 258646_at AT3G08040 ATFRD3, FRD3, FERRIC REDUCTASE DEFECTIVE 3, MAN1, MANGANESE ACCUMULATOR 1 -0.284 -0.071
127 258746_at AT3G05950 [RmlC-like cupins superfamily protein] -0.278 0.102
128 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 -0.277 -0.045
129 245947_at AT5G19530 ACL5, ACAULIS 5 -0.276 0.042
130 264625_at AT1G09020 ATSNF4, SNF4, homolog of yeast sucrose nonfermenting 4 -0.270 -0.141
131 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.266 0.018
132 258923_at AT3G10450 SCPL7, serine carboxypeptidase-like 7 -0.266 0.014
133 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 -0.262 -0.058
134 263947_at AT2G35820 [ureidoglycolate hydrolases] -0.261 0.014
135 247541_at AT5G61660 [glycine-rich protein] -0.261 -0.022
136 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] -0.252 -0.138
137 248011_at AT5G56300 GAMT2, gibberellic acid methyltransferase 2 -0.246 0.036
138 258956_at AT3G01440 PnsL3, Photosynthetic NDH subcomplex L 3, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.244 -0.018
139 251130_at AT5G01180 AtNPF8.2, ATPTR5, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 5, NPF8.2, NRT1/ PTR family 8.2, PTR5, peptide transporter 5 -0.244 -0.006
140 253597_at AT4G30690 [Translation initiation factor 3 protein] -0.241 0.080
141 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.239 -0.047
142 254504_at AT4G20030 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.238 0.044
143 264497_at AT1G30840 ATPUP4, purine permease 4, PUP4, purine permease 4 -0.235 -0.092
144 257643_at AT3G25730 EDF3, ethylene response DNA binding factor 3 -0.233 -0.048
145 246463_at AT5G16970 AER, alkenal reductase, AT-AER, alkenal reductase -0.233 -0.126
146 257375_at AT2G38640 unknown -0.229 -0.065
147 248975_at AT5G45040 CYTC6A, cytochrome c6A -0.223 0.104
148 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 -0.220 -0.143
149 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 -0.214 0.136
150 265151_at AT1G51340 [MATE efflux family protein] -0.213 0.053
151 261717_at AT1G18400 BEE1, BR enhanced expression 1 -0.211 0.094
152 265586_at AT2G19990 PR-1-LIKE, pathogenesis-related protein-1-like -0.210 0.003
153 258038_at AT3G21260 GLTP3, GLYCOLIPID TRANSFER PROTEIN 3 -0.206 0.018
154 266015_at AT2G24190 SDR2, short-chain dehydrogenase/reductase 2 -0.205 0.011
155 256878_at AT3G26460 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.204 -0.079
156 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.204 -0.022
157 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase -0.193 -0.099
158 250764_at AT5G05960 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.193 -0.045
159 261425_at AT1G18880 AtNPF2.9, NPF2.9, NRT1/ PTR family 2.9, NRT1.9, nitrate transporter 1.9 -0.189 0.002
160 245702_at AT5G04220 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3, SYT3, synaptotagmin 3, SYTC -0.186 -0.032
161 259832_at AT1G69580 [Homeodomain-like superfamily protein] -0.186 -0.082
162 263473_at AT2G31750 UGT74D1, UDP-glucosyl transferase 74D1 -0.185 -0.064
163 252482_at AT3G46670 UGT76E11, UDP-glucosyl transferase 76E11 -0.181 -0.048
164 248381_at AT5G51830 [pfkB-like carbohydrate kinase family protein] -0.180 -0.032
165 262700_at AT1G76020 [Thioredoxin superfamily protein] -0.178 -0.001
166 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.178 -0.132