4.0:Information of module
Mutant tga2_5_6
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009627 systemic acquired resistance BP 8.651e-19
GO:0009814 defense response, incompatible interacti... BP 2.404e-18
GO:0006955 immune response BP 7.020e-18
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019748 secondary metabolic process BP 2.130e-07
GO:0009407 toxin catabolic process BP 2.853e-06
GO:0090487 secondary metabolite catabolic process BP 2.853e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant tga2_5_6		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA 0.854 -0.001
2 250942_at AT5G03350 [Legume lectin family protein] 0.817 0.021
3 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 0.733 0.039
4 261221_at AT1G19960 unknown 0.626 0.019
5 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 0.556 0.018
6 249205_at AT5G42600 MRN1, marneral synthase 1 0.549 0.031
7 250302_at AT5G11920 AtcwINV6, 6-&1-fructan exohydrolase, cwINV6, 6-&1-fructan exohydrolase 0.505 0.045
8 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.492 -0.260
9 248169_at AT5G54610 ANK, ankyrin, BDA1, bian da 2 (becoming big in Chinese) 0.483 -0.083
10 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 0.474 0.200
11 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] 0.467 -0.097
12 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.437 -0.080
13 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] 0.431 -0.015
14 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.430 -0.005
15 254416_at AT4G21380 ARK3, receptor kinase 3, RK3, receptor kinase 3 0.400 0.045
16 249295_at AT5G41280 [Receptor-like protein kinase-related family protein] 0.384 -0.142
17 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 0.375 0.033
18 264843_at AT1G03400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.372 -0.057
19 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.372 -0.082
20 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 0.371 0.023
21 256497_at AT1G31580 CXC750, ECS1 0.369 -0.047
22 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 0.358 -0.024
23 259251_at AT3G07600 [Heavy metal transport/detoxification superfamily protein ] 0.357 -0.006
24 247476_at AT5G62330 unknown 0.337 -0.117
25 245550_at AT4G15330 CYP705A1, cytochrome P450, family 705, subfamily A, polypeptide 1 0.332 -0.185
26 251673_at AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 0.331 -0.134
27 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.331 0.296
28 250344_at AT5G11930 [Thioredoxin superfamily protein] 0.314 -0.071
29 260211_at AT1G74440 unknown 0.313 -0.080
30 262743_at AT1G29020 [Calcium-binding EF-hand family protein] 0.312 0.065
31 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] 0.311 0.059
32 259550_at AT1G35230 AGP5, arabinogalactan protein 5 0.308 0.035
33 248062_at AT5G55450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.298 0.064
34 249485_at AT5G39020 [Malectin/receptor-like protein kinase family protein] 0.291 -0.139
35 253997_at AT4G26090 RPS2, RESISTANT TO P. SYRINGAE 2 0.290 -0.105
36 259897_at AT1G71380 ATCEL3, cellulase 3, ATGH9B3, ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B3, CEL3, cellulase 3 0.284 -0.059
37 263402_at AT2G04050 [MATE efflux family protein] 0.283 0.091
38 256366_at AT1G66880 [Protein kinase superfamily protein] 0.282 -0.090
39 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 0.281 0.106
40 265611_at AT2G25510 unknown 0.275 0.007
41 262705_at AT1G16260 [Wall-associated kinase family protein] 0.273 0.032
42 249188_at AT5G42830 [HXXXD-type acyl-transferase family protein] 0.271 -0.150
43 255702_at AT4G00230 XSP1, xylem serine peptidase 1 0.266 0.102
44 256602_at AT3G28310 unknown 0.261 0.014
45 249773_at AT5G24140 SQP2, squalene monooxygenase 2 0.257 -0.007
46 244999_at ATCG00190 RPOB, RNA polymerase subunit beta 0.252 0.070
47 267496_at AT2G30550 DALL3, DAD1-Like Lipase 3 0.248 -0.003
48 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 0.245 -0.075
49 253191_at AT4G35350 XCP1, xylem cysteine peptidase 1 0.244 0.021
50 245611_at AT4G14390 [Ankyrin repeat family protein] 0.243 0.014
51 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 0.236 0.032
52 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.235 0.012
53 250828_at AT5G05250 unknown 0.233 -0.076
54 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.229 -0.031
55 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.227 0.167
56 258813_at AT3G04060 anac046, NAC domain containing protein 46, NAC046, NAC domain containing protein 46 0.227 -0.080
57 249055_at AT5G44460 CML43, calmodulin like 43 0.226 0.086
58 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.226 0.134
59 260179_at AT1G70690 HWI1, HOPW1-1-INDUCED GENE1, PDLP5, PLASMODESMATA-LOCATED PROTEIN 5 0.223 -0.538
60 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.223 -0.133
61 253827_at AT4G28085 unknown 0.220 -0.071
62 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] 0.220 -0.036
63 262796_at AT1G20850 XCP2, xylem cysteine peptidase 2 0.219 0.364
64 252170_at AT3G50480 HR4, homolog of RPW8 4 0.217 -0.212
65 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 0.210 0.014
66 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 0.207 0.114
67 251704_at AT3G56360 unknown 0.206 0.019
68 246121_at AT5G20370 [serine-rich protein-related] 0.205 -0.016
69 262507_at AT1G11330 [S-locus lectin protein kinase family protein] 0.204 0.016
70 249439_at AT5G40020 [Pathogenesis-related thaumatin superfamily protein] 0.202 -0.028
71 261598_at AT1G49750 [Leucine-rich repeat (LRR) family protein] 0.199 0.013
72 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.198 -0.140
73 245000_at ATCG00210 YCF6 0.198 0.098
74 263478_at AT2G31880 EVR, EVERSHED, SOBIR1, SUPPRESSOR OF BIR1 1 0.198 0.133
75 255852_at AT1G66970 GDPDL1, Glycerophosphodiester phosphodiesterase (GDPD) like 1, SVL2, SHV3-like 2 0.197 0.008
76 252447_at AT3G47040 [Glycosyl hydrolase family protein] 0.197 -0.146
77 260558_at AT2G43600 [Chitinase family protein] 0.196 0.112
78 260419_at AT1G69730 [Wall-associated kinase family protein] 0.192 -0.065
79 245074_at AT2G23200 [Protein kinase superfamily protein] 0.191 0.112
80 256935_at AT3G22570 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.191 0.028
81 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 0.188 -0.100
82 248092_at AT5G55170 ATSUMO3, SUM3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO 3, SMALL UBIQUITIN-LIKE MODIFIER 3, SUMO3, small ubiquitin-like modifier 3 0.185 -0.062
83 252346_at AT3G48650 [pseudogene] 0.181 0.197
84 250655_at AT5G06960 OBF5, OCS-element binding factor 5, TGA5, TGACG MOTIF-BINDING FACTOR 5 -0.912 -0.044
85 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 -0.707 -0.087
86 250671_at AT5G06950 AHBP-1B, TGA2, TGACG sequence-specific binding protein 2 -0.653 -0.005
87 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] -0.637 0.044
88 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 -0.597 -0.153
89 257823_at AT3G25190 [Vacuolar iron transporter (VIT) family protein] -0.591 -0.216
90 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform -0.559 -0.158
91 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 -0.551 0.040
92 258033_at AT3G21250 ABCC8, ATP-binding cassette C8, ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6 -0.548 -0.150
93 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 -0.533 0.072
94 260189_at AT1G67550 URE, urease -0.533 0.092
95 249599_at AT5G37990 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.501 -0.031
96 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.487 0.023
97 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 -0.486 -0.132
98 262935_at AT1G79410 AtOCT5, organic cation/carnitine transporter5, OCT5, organic cation/carnitine transporter5 -0.485 -0.130
99 257216_at AT3G14990 AtDJ1A, DJ-1 homolog A, DJ-1a, DJ1A, DJ-1 homolog A -0.480 0.231
100 266296_at AT2G29420 ATGSTU7, glutathione S-transferase tau 7, GST25, GLUTATHIONE S-TRANSFERASE 25, GSTU7, glutathione S-transferase tau 7 -0.480 -0.056
101 256269_at AT3G12250 BZIP45, TGA6, TGACG motif-binding factor 6 -0.471 0.131
102 259548_at AT1G35260 MLP165, MLP-like protein 165 -0.450 0.059
103 267382_at AT2G44300 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.446 -0.103
104 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 -0.419 -0.028
105 250499_at AT5G09730 ATBX3, ATBXL3, BETA-XYLOSIDASE 3, BX3, BXL3, beta-xylosidase 3, XYL3 -0.417 0.041
106 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.417 0.111
107 264016_at AT2G21220 SAUR12, SMALL AUXIN UPREGULATED RNA 12 -0.408 0.412
108 254759_at AT4G13180 [NAD(P)-binding Rossmann-fold superfamily protein] -0.385 -0.057
109 266141_at AT2G02120 LCR70, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70, PDF2.1 -0.375 -0.134
110 255543_at AT4G01870 [tolB protein-related] -0.373 -0.003
111 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 -0.356 -0.166
112 260592_at AT1G55850 ATCSLE1, CSLE1, cellulose synthase like E1 -0.350 0.053
113 255666_at AT4G00390 [DNA-binding storekeeper protein-related transcriptional regulator] -0.342 0.122
114 264872_at AT1G24260 AGL9, AGAMOUS-like 9, SEP3, SEPALLATA3 -0.339 -0.069
115 251968_at AT3G53100 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.337 -0.014
116 260813_at AT1G43700 SUE3, sulphate utilization efficiency 3, VIP1, VIRE2-interacting protein 1 -0.337 0.638
117 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 -0.328 -0.175
118 263959_at AT2G36210 SAUR45, SMALL AUXIN UPREGULATED RNA 45 -0.315 0.176
119 260135_at AT1G66400 CML23, calmodulin like 23 -0.306 -0.110
120 254512_at AT4G20230 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.305 -0.010
121 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] -0.304 -0.132
122 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.304 -0.029
123 263668_at AT1G04350 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.303 -0.165
124 247024_at AT5G66985 unknown -0.298 0.043
125 247447_at AT5G62730 [Major facilitator superfamily protein] -0.294 -0.008
126 258646_at AT3G08040 ATFRD3, FRD3, FERRIC REDUCTASE DEFECTIVE 3, MAN1, MANGANESE ACCUMULATOR 1 -0.284 -0.066
127 258746_at AT3G05950 [RmlC-like cupins superfamily protein] -0.278 0.219
128 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 -0.277 -0.178
129 245947_at AT5G19530 ACL5, ACAULIS 5 -0.276 0.215
130 264625_at AT1G09020 ATSNF4, SNF4, homolog of yeast sucrose nonfermenting 4 -0.270 -0.057
131 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.266 0.144
132 258923_at AT3G10450 SCPL7, serine carboxypeptidase-like 7 -0.266 0.020
133 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 -0.262 0.018
134 263947_at AT2G35820 [ureidoglycolate hydrolases] -0.261 -0.049
135 247541_at AT5G61660 [glycine-rich protein] -0.261 -0.239
136 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] -0.252 0.071
137 248011_at AT5G56300 GAMT2, gibberellic acid methyltransferase 2 -0.246 0.378
138 258956_at AT3G01440 PnsL3, Photosynthetic NDH subcomplex L 3, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.244 0.071
139 251130_at AT5G01180 AtNPF8.2, ATPTR5, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 5, NPF8.2, NRT1/ PTR family 8.2, PTR5, peptide transporter 5 -0.244 0.079
140 253597_at AT4G30690 [Translation initiation factor 3 protein] -0.241 0.009
141 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.239 0.143
142 254504_at AT4G20030 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.238 0.077
143 264497_at AT1G30840 ATPUP4, purine permease 4, PUP4, purine permease 4 -0.235 0.009
144 257643_at AT3G25730 EDF3, ethylene response DNA binding factor 3 -0.233 -0.002
145 246463_at AT5G16970 AER, alkenal reductase, AT-AER, alkenal reductase -0.233 0.224
146 257375_at AT2G38640 unknown -0.229 0.017
147 248975_at AT5G45040 CYTC6A, cytochrome c6A -0.223 0.070
148 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 -0.220 0.175
149 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 -0.214 -0.021
150 265151_at AT1G51340 [MATE efflux family protein] -0.213 -0.002
151 261717_at AT1G18400 BEE1, BR enhanced expression 1 -0.211 -0.042
152 265586_at AT2G19990 PR-1-LIKE, pathogenesis-related protein-1-like -0.210 0.009
153 258038_at AT3G21260 GLTP3, GLYCOLIPID TRANSFER PROTEIN 3 -0.206 0.343
154 266015_at AT2G24190 SDR2, short-chain dehydrogenase/reductase 2 -0.205 0.150
155 256878_at AT3G26460 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.204 -0.010
156 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.204 -0.003
157 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase -0.193 0.089
158 250764_at AT5G05960 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.193 0.096
159 261425_at AT1G18880 AtNPF2.9, NPF2.9, NRT1/ PTR family 2.9, NRT1.9, nitrate transporter 1.9 -0.189 0.026
160 245702_at AT5G04220 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3, SYT3, synaptotagmin 3, SYTC -0.186 0.021
161 259832_at AT1G69580 [Homeodomain-like superfamily protein] -0.186 -0.100
162 263473_at AT2G31750 UGT74D1, UDP-glucosyl transferase 74D1 -0.185 -0.098
163 252482_at AT3G46670 UGT76E11, UDP-glucosyl transferase 76E11 -0.181 -0.077
164 248381_at AT5G51830 [pfkB-like carbohydrate kinase family protein] -0.180 -0.092
165 262700_at AT1G76020 [Thioredoxin superfamily protein] -0.178 0.157
166 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.178 0.115