4.0:Information of module
Estradiol4 days
In comparison with rrd2 IBA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044710 single-organism metabolic process BP 2.123e-09
GO:0043436 oxoacid metabolic process BP 3.261e-09
GO:0019752 carboxylic acid metabolic process BP 3.277e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006081 cellular aldehyde metabolic process BP 5.787e-31
GO:0009657 plastid organization BP 6.155e-30
GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 9.711e-29
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Estradiol4 days		 Log2 signal ratio
rrd2 IBA
1 253894_at AT4G27150 AT2S2, SESA2, seed storage albumin 2 2.050 0.112
2 265095_at AT1G03880 CRB, CRUCIFERIN B, CRU2, cruciferin 2 1.838 0.083
3 253902_at AT4G27170 AT2S4, SESA4, seed storage albumin 4 1.816 0.042
4 265094_at AT1G03890 [RmlC-like cupins superfamily protein] 1.810 0.080
5 253895_at AT4G27160 AT2S3, SESA3, seed storage albumin 3 1.783 0.064
6 264079_at AT2G28490 [RmlC-like cupins superfamily protein] 1.772 0.502
7 258327_at AT3G22640 PAP85 1.738 0.153
8 251202_at AT3G63040 unknown 1.684 0.135
9 253930_at AT4G26740 AtCLO1, ATPXG1, ARABIDOPSIS THALIANA PEROXYGENASE 1, ATS1, seed gene 1, CLO1, CALEOSIN1 1.663 0.086
10 254095_at AT4G25140 OLE1, OLEOSIN 1, OLEO1, oleosin 1 1.601 0.586
11 253904_at AT4G27140 AT2S1, SESA1, seed storage albumin 1 1.589 0.025
12 246273_at AT4G36700 [RmlC-like cupins superfamily protein] 1.587 0.208
13 253241_at AT4G34520 FAE1, FATTY ACID ELONGATION1, KCS18, 3-ketoacyl-CoA synthase 18 1.571 0.074
14 256290_at AT3G12203 scpl17, serine carboxypeptidase-like 17 1.569 0.146
15 248125_at AT5G54740 SESA5, seed storage albumin 5 1.546 0.138
16 262431_at AT1G47540 [Scorpion toxin-like knottin superfamily protein] 1.514 0.053
17 263175_at AT1G05510 OBAP1a, Oil Body-Associated Protein 1a 1.475 0.390
18 250501_at AT5G09640 SCPL19, serine carboxypeptidase-like 19, SNG2, SINAPOYLGLUCOSE ACCUMULATOR 2 1.467 0.160
19 264612_at AT1G04560 [AWPM-19-like family protein] 1.465 0.266
20 264187_at AT1G54860 [Glycoprotein membrane precursor GPI-anchored] 1.446 0.103
21 260854_at AT1G21970 AtLEC1, EMB 212, EMBRYO DEFECTIVE 212, EMB212, EMBRYO DEFECTIVE 212, LEC1, LEAFY COTYLEDON 1, NF-YB9, NUCLEAR FACTOR Y, SUBUNIT B9 1.422 0.176
22 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 1.412 0.339
23 267431_at AT2G34870 MEE26, maternal effect embryo arrest 26 1.372 0.030
24 255471_at AT4G03050 AOP3 1.353 0.119
25 267317_at AT2G34700 [Pollen Ole e 1 allergen and extensin family protein] 1.353 0.188
26 259167_at AT3G01570 [Oleosin family protein] 1.337 0.170
27 245335_at AT4G16160 ATOEP16-2, ATOEP16-S 1.318 0.217
28 255905_at AT1G17810 BETA-TIP, beta-tonoplast intrinsic protein 1.312 0.170
29 261915_at AT1G65880 BZO1, benzoyloxyglucosinolate 1 1.309 0.064
30 255007_at AT4G10020 AtHSD5, hydroxysteroid dehydrogenase 5, HSD5, hydroxysteroid dehydrogenase 5 1.300 0.168
31 265255_at AT2G28420 GLYI8, glyoxylase I 8 1.285 0.093
32 249937_at AT5G22470 [NAD+ ADP-ribosyltransferases] 1.259 0.244
33 263123_at AT1G78500 PEN6, PENTACYCLIC TRITERPENE SYNTHASE 6 1.259 0.019
34 257869_at AT3G25160 [ER lumen protein retaining receptor family protein] 1.255 0.194
35 249547_at AT5G38160 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 1.248 0.052
36 253767_at AT4G28520 CRC, CRUCIFERIN C, CRU3, cruciferin 3 1.226 0.100
37 254036_at AT4G25980 [Peroxidase superfamily protein] 1.223 0.084
38 251838_at AT3G54940 [Papain family cysteine protease] 1.210 0.574
39 250611_at AT5G07200 ATGA20OX3, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, GA20OX3, gibberellin 20-oxidase 3, YAP169 1.202 0.089
40 249043_at AT5G44360 [FAD-binding Berberine family protein] 1.198 0.119
41 258240_at AT3G27660 OLE3, OLEOSIN 3, OLEO4, oleosin 4 1.185 0.113
42 248647_at AT5G49190 ATSUS2, SSA, SUCROSE SYNTHASE FROM ARABIDOPSIS, SUS2, sucrose synthase 2 1.180 0.056
43 248435_at AT5G51210 OLEO3, oleosin3 1.179 0.009
44 247421_at AT5G62800 [Protein with RING/U-box and TRAF-like domains] 1.150 0.158
45 246814_at AT5G27200 ACP5, acyl carrier protein 5 1.145 0.186
46 250583_at AT5G07500 AtTZF6, PEI1, TZF6, Tandem CCCH Zinc Finger protein 6 1.139 0.055
47 263138_at AT1G65090 unknown 1.128 0.050
48 260088_at AT1G73190 ALPHA-TIP, ALPHA-TONOPLAST INTRINSIC PROTEIN, TIP3;1 1.123 0.681
49 264514_at AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] 1.121 0.284
50 248096_at AT5G55240 ATPXG2, ARABIDOPSIS THALIANA PEROXYGENASE 2 1.111 0.210
51 256827_at AT3G18570 [Oleosin family protein] 1.110 0.173
52 259782_at AT1G29680 unknown 1.100 0.127
53 262185_at AT1G77950 AGL67, AGAMOUS-like 67 1.075 0.031
54 261305_at AT1G48470 GLN1;5, glutamine synthetase 1;5 1.072 0.083
55 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 1.045 0.220
56 248754_at AT5G47670 L1L, LEC1-LIKE, NF-YB6, nuclear factor Y, subunit B6 1.045 0.067
57 254572_at AT4G19380 [Long-chain fatty alcohol dehydrogenase family protein] 1.039 0.012
58 255840_at AT2G33520 unknown 1.032 0.149
59 259728_at AT1G60970 [SNARE-like superfamily protein] 1.030 -0.039
60 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 1.029 -0.045
61 249913_at AT5G22810 [GDSL-like Lipase/Acylhydrolase superfamily protein] 1.025 0.098
62 250620_at AT5G07190 ATS3, seed gene 3 0.985 0.137
63 258258_at AT3G26790 FUS3, FUSCA 3 0.984 0.065
64 250893_at AT5G03795 [Exostosin family protein] 0.937 0.179
65 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.929 0.158
66 248494_at AT5G50770 AtHSD6, hydroxysteroid dehydrogenase 6, HSD6, hydroxysteroid dehydrogenase 6 0.927 0.154
67 264606_at AT1G04660 [glycine-rich protein] 0.925 0.136
68 260265_at AT1G68510 LBD42, LOB domain-containing protein 42 0.913 0.062
69 265863_at AT2G01770 ATVIT1, VIT1, vacuolar iron transporter 1 0.896 0.139
70 246889_at AT5G25470 [AP2/B3-like transcriptional factor family protein] 0.894 0.098
71 261503_at AT1G71691 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.894 0.097
72 250258_at AT5G13790 AGL15, AGAMOUS-like 15 0.889 -0.245
73 250519_at AT5G08460 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.790 0.088
74 249813_at AT5G23940 DCR, DEFECTIVE IN CUTICULAR RIDGES, EMB3009, EMBRYO DEFECTIVE 3009, PEL3, PERMEABLE LEAVES3 0.779 0.096
75 259142_at AT3G10200 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.776 0.038
76 266912_at AT2G45900 TRM13, TON1 Recruiting Motif 13 0.755 0.005
77 253375_at AT4G33280 [AP2/B3-like transcriptional factor family protein] 0.755 0.004
78 247255_at AT5G64780 [Uncharacterised conserved protein UCP009193] 0.746 -0.046
79 265644_at AT2G27380 ATEPR1, extensin proline-rich 1, EPR1, extensin proline-rich 1 0.737 0.105
80 246054_at AT5G08360 unknown 0.720 0.197
81 248372_at AT5G51850 TRM24, TON1 Recruiting Motif 24 0.713 -0.307
82 262734_at AT1G28640 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.713 0.111
83 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 0.704 -0.243
84 256780_at AT3G13640 ABCE1, ATP-binding cassette E1, ATRLI1, RNAse l inhibitor protein 1, RLI1, RNAse l inhibitor protein 1 0.700 0.002
85 255924_at AT1G22170 [Phosphoglycerate mutase family protein] 0.698 0.061
86 262891_at AT1G79460 ATKS, ARABIDOPSIS THALIANA ENT-KAURENE SYNTHASE, ATKS1, ARABIDOPSIS THALIANA ENT-KAURENE SYNTHASE 1, GA2, GA REQUIRING 2, KS, KS1, ENT-KAURENE SYNTHASE 1 0.678 -0.188
87 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 -0.941 0.028
88 247070_at AT5G66815 unknown -0.881 0.098
89 245165_at AT2G33180 unknown -0.810 0.198
90 265547_at AT2G28305 ATLOG1, LOG1, LONELY GUY 1 -0.733 -0.101
91 251181_at AT3G62820 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.716 0.110
92 246002_at AT5G20740 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.671 0.122
93 266813_at AT2G44920 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.666 0.159
94 251466_at AT3G59340 unknown -0.660 0.324
95 261981_at AT1G33811 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.659 0.095
96 247816_at AT5G58260 NdhN, NADH dehydrogenase-like complex N -0.646 0.038
97 264261_at AT1G09240 ATNAS3, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 3, NAS3, nicotianamine synthase 3 -0.627 0.178
98 260831_at AT1G06830 [Glutaredoxin family protein] -0.619 0.159
99 264343_at AT1G11850 unknown -0.608 0.143
100 249756_at AT5G24313 unknown -0.601 0.056
101 260353_at AT1G69230 SP1L2, SPIRAL1-like2 -0.586 0.095
102 248062_at AT5G55450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.582 0.114
103 252603_at AT3G45050 unknown -0.579 0.166
104 264482_at AT1G77210 AtSTP14, sugar transport protein 14, STP14, sugar transport protein 14 -0.577 0.245
105 261934_at AT1G22400 ATUGT85A1, ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UGT85A1 -0.567 0.283
106 250789_at AT5G05630 PUT3, POLYAMINE UPTAKE TRANSPORTER 3, RMV1, resistant to methyl viologen 1 -0.558 0.244
107 255294_at AT4G04750 [Major facilitator superfamily protein] -0.542 0.235
108 251660_at AT3G57160 unknown -0.530 0.268
109 266766_at AT2G46880 ATPAP14, PAP14, purple acid phosphatase 14 -0.521 0.116
110 264636_at AT1G65490 unknown -0.517 0.359
111 246019_at AT5G10690 [pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein] -0.509 0.012
112 264613_at AT1G04640 LIP2, lipoyltransferase 2 -0.506 0.113
113 256653_at AT3G18870 [Mitochondrial transcription termination factor family protein] -0.498 -0.065
114 254090_at AT4G25010 AtSWEET14, SWEET14 -0.497 0.159
115 251155_at AT3G63160 OEP6, outer envelope protein 6 -0.493 0.038
116 244997_at ATCG00170 RPOC2 -0.492 0.163
117 262370_at AT1G73090 unknown -0.482 -0.054
118 248962_at AT5G45680 ATFKBP13, FK506 BINDING PROTEIN 13, FKBP13, FK506-binding protein 13 -0.476 0.152
119 247702_at AT5G59500 [protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases] -0.474 0.215
120 257647_at AT3G25805 unknown -0.471 0.125
121 247529_at AT5G61520 [Major facilitator superfamily protein] -0.468 0.167
122 253495_at AT4G31850 PGR3, proton gradient regulation 3 -0.468 0.141
123 257891_at AT3G17170 RFC3, REGULATOR OF FATTY-ACID COMPOSITION 3 -0.462 -0.456
124 252853_at AT4G39710 FKBP16-2, FK506-binding protein 16-2, PnsL4, Photosynthetic NDH subcomplex L 4 -0.460 -0.026
125 256856_at AT3G15110 unknown -0.458 0.114
126 262603_at AT1G15380 GLYI4, glyoxylase I 4 -0.457 -0.080
127 264195_at AT1G22690 [Gibberellin-regulated family protein] -0.453 0.085
128 251442_at AT3G59980 [Nucleic acid-binding, OB-fold-like protein] -0.447 0.120
129 249162_at AT5G42765 unknown -0.444 0.153
130 263376_at AT2G20520 FLA6, FASCICLIN-like arabinogalactan 6 -0.433 -0.007
131 267586_at AT2G41950 unknown -0.433 0.150
132 249258_at AT5G41650 [Lactoylglutathione lyase / glyoxalase I family protein] -0.432 0.153
133 260335_at AT1G74000 SS3, strictosidine synthase 3 -0.430 0.202
134 257021_at AT3G19710 BCAT4, branched-chain aminotransferase4 -0.428 0.227
135 258989_at AT3G08920 [Rhodanese/Cell cycle control phosphatase superfamily protein] -0.424 0.136
136 255447_at AT4G02790 EMB3129, EMBRYO DEFECTIVE 3129 -0.424 -0.011
137 253353_at AT4G33730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.422 0.093
138 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] -0.422 0.284
139 266668_at AT2G29760 OTP81, ORGANELLE TRANSCRIPT PROCESSING 81 -0.421 0.112
140 259093_at AT3G04860 unknown -0.421 0.225
141 255786_at AT1G19670 ATCLH1, chlorophyllase 1, ATHCOR1, CORONATINE-INDUCED PROTEIN 1, CLH1, chlorophyllase 1, CORI1, CORONATINE-INDUCED PROTEIN 1 -0.420 0.060
142 261751_at AT1G76080 ATCDSP32, ARABIDOPSIS THALIANA CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD, CDSP32, chloroplastic drought-induced stress protein of 32 kD -0.419 0.014
143 254756_at AT4G13235 EDA21, embryo sac development arrest 21 -0.418 0.037
144 246797_at AT5G26790 unknown -0.416 0.315
145 247329_at AT5G64150 [RNA methyltransferase family protein] -0.416 0.086
146 263471_at AT2G31890 ATRAP, RAP -0.410 -0.010
147 263402_at AT2G04050 [MATE efflux family protein] -0.402 0.231
148 258538_at AT3G06950 [Pseudouridine synthase family protein] -0.400 0.027
149 265853_at AT2G42360 [RING/U-box superfamily protein] -0.400 0.225
150 253627_at AT4G30650 [Low temperature and salt responsive protein family] -0.399 0.186
151 257337_at ATMG00060 NAD5, NADH DEHYDROGENASE SUBUNIT 5, NAD5.3, NADH DEHYDROGENASE SUBUNIT 5.3, NAD5C, NADH dehydrogenase subunit 5C -0.398 0.449
152 245930_at AT5G09240 [ssDNA-binding transcriptional regulator] -0.392 0.112
153 260072_at AT1G73650 [FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors] -0.387 0.075
154 261042_at AT1G01200 ATRAB-A3, ARABIDOPSIS RAB GTPASE HOMOLOG A3, ATRABA3, RAB GTPase homolog A3, RABA3, RAB GTPase homolog A3 -0.382 0.204
155 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.382 0.139
156 263760_at AT2G21280 ATSULA, GC1, GIANT CHLOROPLAST 1, SULA -0.380 0.076
157 262127_at AT1G52550 unknown -0.380 0.136
158 253816_at AT4G28210 EMB1923, embryo defective 1923 -0.378 0.122
159 266867_at AT2G45770 CPFTSY, FRD4, FERRIC CHELATE REDUCTASE DEFECTIVE 4 -0.377 -0.053
160 262309_at AT1G70820 [phosphoglucomutase, putative / glucose phosphomutase, putative] -0.375 0.107
161 263831_at AT2G40300 ATFER4, ferritin 4, FER4, ferritin 4 -0.372 0.155
162 253814_at AT4G28290 unknown -0.370 0.147
163 250135_at AT5G15360 unknown -0.368 0.176
164 244938_at ATCG01120 RPS15, chloroplast ribosomal protein S15 -0.367 0.040
165 249554_at AT5G38290 [Peptidyl-tRNA hydrolase family protein] -0.365 0.183
166 261608_at AT1G49650 [alpha/beta-Hydrolases superfamily protein] -0.365 0.165
167 248586_at AT5G49610 [F-box family protein] -0.364 0.273
168 250075_at AT5G17670 [alpha/beta-Hydrolases superfamily protein] -0.361 0.062
169 264653_at AT1G08980 AMI1, amidase 1, ATAMI1, AMIDASE-LIKE PROTEIN 1, ATTOC64-I, ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-I, TOC64-I, TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-I -0.359 0.168
170 266326_at AT2G46650 ATCB5-C, ARABIDOPSIS CYTOCHROME B5 ISOFORM C, B5 #1, CB5-C, cytochrome B5 isoform C, CYTB5-C -0.358 0.264
171 247400_at AT5G62840 [Phosphoglycerate mutase family protein] -0.352 0.095