4.0:Information of module
Mutant cry1 (High Light)
In comparison with Total RNA 35S:HF-RPL18 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010033 response to organic substance BP 3.265e-12
GO:0009725 response to hormone BP 4.184e-12
GO:0042221 response to chemical BP 3.348e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009812 flavonoid metabolic process BP 6.860e-24
GO:0010224 response to UV-B BP 3.871e-23
GO:0009813 flavonoid biosynthetic process BP 1.362e-22
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant cry1 (High Light)		 Log2 signal ratio
Total RNA 35S:HF-RPL18
1 255822_at AT2G40610 ATEXP8, ATEXPA8, expansin A8, ATHEXP ALPHA 1.11, EXP8, EXPA8, expansin A8 0.596 -0.098
2 262719_at AT1G43590 unknown 0.579 0.699
3 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 0.578 -0.043
4 253689_at AT4G29770 unknown 0.455 0.036
5 260957_at AT1G06080 ADS1, delta 9 desaturase 1, AtADS1 0.449 -0.110
6 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 0.439 -0.063
7 256418_at AT3G06160 [AP2/B3-like transcriptional factor family protein] 0.408 -0.069
8 259839_at AT1G52190 AtNPF1.2, NPF1.2, NRT1/ PTR family 1.2, NRT1.11, nitrate transporter 1.11 0.385 -0.061
9 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 0.384 -0.021
10 265817_at AT2G18050 HIS1-3, histone H1-3 0.345 0.048
11 247643_at AT5G60450 ARF4, auxin response factor 4 0.333 -0.014
12 250327_at AT5G12050 unknown 0.332 -0.103
13 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 0.326 -0.088
14 259373_at AT1G69160 unknown 0.301 0.061
15 259104_at AT3G02170 LNG2, LONGIFOLIA2, TRM1, TON1 Recruiting Motif 1 0.278 -0.071
16 248839_at AT5G46690 bHLH071, beta HLH protein 71 0.240 -0.037
17 253493_at AT4G31820 ENP, ENHANCER OF PINOID, MAB4, MACCHI-BOU 4, NPY1, NAKED PINS IN YUC MUTANTS 1 0.239 -0.052
18 259398_at AT1G17700 PRA1.F1, prenylated RAB acceptor 1.F1 0.238 -0.059
19 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.237 -0.031
20 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 0.236 -0.085
21 256980_at AT3G26932 DRB3, dsRNA-binding protein 3 0.227 0.035
22 247474_at AT5G62280 unknown 0.218 -0.123
23 267452_at AT2G33860 ARF3, AUXIN RESPONSE TRANSCRIPTION FACTOR 3, ETT, ETTIN 0.210 0.016
24 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 0.208 -0.007
25 261480_at AT1G14280 PKS2, phytochrome kinase substrate 2 0.208 0.000
26 247754_at AT5G59080 unknown 0.198 -0.072
27 261502_at AT1G14440 AtHB31, homeobox protein 31, FTM2, FLORAL TRANSITION AT THE MERISTEM2, HB31, homeobox protein 31, ZHD4, ZINC FINGER HOMEODOMAIN 4 0.194 -0.049
28 254609_at AT4G18970 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.193 -0.060
29 250013_at AT5G18040 unknown 0.192 0.067
30 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 0.187 -0.092
31 251575_at AT3G58120 ATBZIP61, BZIP61 0.182 -0.130
32 263002_at AT1G54200 unknown 0.180 -0.152
33 265249_at AT2G01940 ATIDD15, ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15, SGR5, SHOOT GRAVITROPISM 5 0.176 0.013
34 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.176 0.012
35 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 0.173 0.013
36 265726_at AT2G32010 CVL1, CVP2 like 1 0.170 -0.083
37 259689_x_at AT1G63130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.168 0.010
38 266899_at AT2G34620 [Mitochondrial transcription termination factor family protein] 0.167 -0.035
39 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 0.166 -0.092
40 260266_at AT1G68520 BBX14, B-box domain protein 14 0.166 -0.016
41 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] 0.163 0.002
42 245242_at AT1G44446 ATCAO, ARABIDOPSIS THALIANA CHLOROPHYLL A OXYGENASE, CAO, CHLOROPHYLL A OXYGENASE, CH1, CHLORINA 1 0.159 0.021
43 248208_at AT5G53980 ATHB52, homeobox protein 52, HB52, homeobox protein 52 0.159 0.003
44 246142_at AT5G19970 unknown 0.158 -0.016
45 262399_at AT1G49500 unknown 0.158 -0.093
46 253812_at AT4G28240 [Wound-responsive family protein] 0.156 0.014
47 267158_at AT2G37640 ATEXP3, EXPANSIN 3, ATEXPA3, ARABIDOPSIS THALIANA EXPANSIN A3, ATHEXP ALPHA 1.9, EXP3 0.156 0.002
48 267580_at AT2G41990 unknown 0.154 -0.012
49 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 0.153 -0.040
50 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 0.150 0.005
51 255648_at AT4G00910 [Aluminium activated malate transporter family protein] 0.149 -0.030
52 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.147 0.053
53 248167_at AT5G54530 unknown 0.141 -0.027
54 259182_at AT3G01750 [Ankyrin repeat family protein] 0.141 -0.115
55 267271_at AT2G02540 ATHB21, homeobox protein 21, HB21, homeobox protein 21, ZFHD4, ZINC FINGER HOMEODOMAIN 4, ZHD3, ZINC FINGER HOMEODOMAIN 3 0.140 -0.109
56 255652_at AT4G00950 MEE47, maternal effect embryo arrest 47 0.140 -0.068
57 256454_at AT1G75280 [NmrA-like negative transcriptional regulator family protein] -1.434 -0.015
58 256453_at AT1G75270 DHAR2, dehydroascorbate reductase 2 -1.190 -0.026
59 255068_at AT4G08920 ATCRY1, BLU1, BLUE LIGHT UNINHIBITED 1, CRY1, cryptochrome 1, HY4, ELONGATED HYPOCOTYL 4, OOP2, OUT OF PHASE 2 -0.836 0.019
60 256452_at AT1G75240 AtHB33, homeobox protein 33, HB33, homeobox protein 33, ZHD5, zinc-finger homeodomain 5 -0.683 -0.002
61 257595_at AT3G24750 unknown -0.539 0.002
62 249843_at AT5G23570 ATSGS3, SUPPRESSOR OF GENE SILENCING 3, SGS3, SUPPRESSOR OF GENE SILENCING 3 -0.486 0.014
63 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 -0.471 0.141
64 256509_at AT1G75300 [NmrA-like negative transcriptional regulator family protein] -0.438 -0.072
65 253496_at AT4G31870 ATGPX7, GLUTATHIONE PEROXIDASE 7, GPX7, glutathione peroxidase 7 -0.430 0.010
66 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] -0.410 0.067
67 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.322 -0.091
68 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] -0.304 0.017
69 256386_at AT1G66540 [Cytochrome P450 superfamily protein] -0.301 0.034
70 246966_at AT5G24850 CRY3, cryptochrome 3 -0.297 0.116
71 250049_at AT5G17780 [alpha/beta-Hydrolases superfamily protein] -0.295 0.009
72 265510_at AT2G05630 ATG8D -0.292 -0.006
73 245560_at AT4G15480 UGT84A1 -0.278 0.026
74 248347_at AT5G52250 EFO1, EARLY FLOWERING BY OVEREXPRESSION 1, RUP1, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 -0.277 -0.009
75 245126_at AT2G47460 ATMYB12, MYB DOMAIN PROTEIN 12, MYB12, myb domain protein 12, PFG1, PRODUCTION OF FLAVONOL GLYCOSIDES 1 -0.264 -0.007
76 265634_at AT2G25530 [AFG1-like ATPase family protein] -0.260 0.000
77 264752_at AT1G23010 LPR1, Low Phosphate Root1 -0.254 -0.015
78 262750_at AT1G28710 [Nucleotide-diphospho-sugar transferase family protein] -0.250 -0.061
79 267036_at AT2G38465 unknown -0.246 -0.043
80 249497_at AT5G39220 [alpha/beta-Hydrolases superfamily protein] -0.235 -0.035
81 247463_at AT5G62210 [Embryo-specific protein 3, (ATS3)] -0.225 0.064
82 267070_at AT2G41000 [Chaperone DnaJ-domain superfamily protein] -0.218 0.005
83 247641_at AT5G60540 ATPDX2, PYRIDOXINE BIOSYNTHESIS 2, EMB2407, EMBRYO DEFECTIVE 2407, PDX2, pyridoxine biosynthesis 2 -0.216 -0.014
84 258349_at AT3G17609 HYH, HY5-homolog -0.208 0.114
85 261443_at AT1G28480 GRX480, roxy19 -0.206 0.007
86 263918_at AT2G36590 ATPROT3, PROLINE TRANSPORTER 3, ProT3, proline transporter 3 -0.205 -0.200
87 254327_at AT4G22490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.204 0.093
88 250420_at AT5G11260 HY5, ELONGATED HYPOCOTYL 5, TED 5, REVERSAL OF THE DET PHENOTYPE 5 -0.202 0.065
89 254430_at AT4G20820 [FAD-binding Berberine family protein] -0.202 0.058
90 264287_at AT1G61930 unknown -0.201 0.067
91 248049_at AT5G56090 COX15, cytochrome c oxidase 15 -0.201 -0.035
92 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.200 0.068
93 260035_at AT1G68850 [Peroxidase superfamily protein] -0.195 -0.011
94 256816_at AT3G21400 unknown -0.191 -0.015
95 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.189 -0.015
96 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 -0.188 0.000
97 252383_at AT3G47780 ABCA7, ATP-binding cassette A7, ATATH6, A. THALIANA ABC2 HOMOLOG 6, ATH6, ABC2 homolog 6 -0.176 0.132
98 267066_at AT2G41040 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.175 0.003
99 259537_at AT1G12370 PHR1, photolyase 1, UVR2, UV RESISTANCE 2 -0.173 -0.020
100 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 -0.171 0.001
101 247326_at AT5G64110 [Peroxidase superfamily protein] -0.171 -0.010
102 251020_at AT5G02270 ABCI20, ATP-binding cassette I20, ATNAP9, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 9, NAP9, non-intrinsic ABC protein 9 -0.166 0.044
103 251062_at AT5G01840 ATOFP1, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, OFP1, ovate family protein 1 -0.166 0.078
104 252010_at AT3G52740 unknown -0.163 0.004
105 255596_at AT4G01720 AtWRKY47, WRKY47 -0.163 -0.019
106 252629_at AT3G44970 [Cytochrome P450 superfamily protein] -0.162 0.104
107 264637_at AT1G65560 [Zinc-binding dehydrogenase family protein] -0.162 0.036
108 261514_at AT1G71870 [MATE efflux family protein] -0.162 0.064
109 262748_at AT1G28610 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.162 0.031
110 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 -0.161 -0.004
111 251422_at AT3G60540 [Preprotein translocase Sec, Sec61-beta subunit protein] -0.156 0.110