4.0:Information of module
Mutant cry1 (High Light)
In comparison with seedlings by volatiles from leafminer damaged Lima bean 48h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010033 response to organic substance BP 3.265e-12
GO:0009725 response to hormone BP 4.184e-12
GO:0042221 response to chemical BP 3.348e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009812 flavonoid metabolic process BP 6.860e-24
GO:0010224 response to UV-B BP 3.871e-23
GO:0009813 flavonoid biosynthetic process BP 1.362e-22
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant cry1 (High Light)		 Log2 signal ratio
seedlings by volatiles from leafminer damaged Lima bean 48h
1 255822_at AT2G40610 ATEXP8, ATEXPA8, expansin A8, ATHEXP ALPHA 1.11, EXP8, EXPA8, expansin A8 0.596 -0.179
2 262719_at AT1G43590 unknown 0.579 -0.313
3 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 0.578 -0.187
4 253689_at AT4G29770 unknown 0.455 0.083
5 260957_at AT1G06080 ADS1, delta 9 desaturase 1, AtADS1 0.449 -0.182
6 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 0.439 0.044
7 256418_at AT3G06160 [AP2/B3-like transcriptional factor family protein] 0.408 -0.017
8 259839_at AT1G52190 AtNPF1.2, NPF1.2, NRT1/ PTR family 1.2, NRT1.11, nitrate transporter 1.11 0.385 -0.045
9 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 0.384 -0.256
10 265817_at AT2G18050 HIS1-3, histone H1-3 0.345 -0.087
11 247643_at AT5G60450 ARF4, auxin response factor 4 0.333 -0.012
12 250327_at AT5G12050 unknown 0.332 -0.244
13 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 0.326 -0.337
14 259373_at AT1G69160 unknown 0.301 -0.240
15 259104_at AT3G02170 LNG2, LONGIFOLIA2, TRM1, TON1 Recruiting Motif 1 0.278 -0.100
16 248839_at AT5G46690 bHLH071, beta HLH protein 71 0.240 -0.224
17 253493_at AT4G31820 ENP, ENHANCER OF PINOID, MAB4, MACCHI-BOU 4, NPY1, NAKED PINS IN YUC MUTANTS 1 0.239 -0.160
18 259398_at AT1G17700 PRA1.F1, prenylated RAB acceptor 1.F1 0.238 -0.102
19 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.237 -0.186
20 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 0.236 -0.075
21 256980_at AT3G26932 DRB3, dsRNA-binding protein 3 0.227 -0.183
22 247474_at AT5G62280 unknown 0.218 -0.008
23 267452_at AT2G33860 ARF3, AUXIN RESPONSE TRANSCRIPTION FACTOR 3, ETT, ETTIN 0.210 -0.029
24 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 0.208 0.169
25 261480_at AT1G14280 PKS2, phytochrome kinase substrate 2 0.208 -0.134
26 247754_at AT5G59080 unknown 0.198 -0.172
27 261502_at AT1G14440 AtHB31, homeobox protein 31, FTM2, FLORAL TRANSITION AT THE MERISTEM2, HB31, homeobox protein 31, ZHD4, ZINC FINGER HOMEODOMAIN 4 0.194 0.017
28 254609_at AT4G18970 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.193 -0.014
29 250013_at AT5G18040 unknown 0.192 0.030
30 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 0.187 -0.029
31 251575_at AT3G58120 ATBZIP61, BZIP61 0.182 -0.137
32 263002_at AT1G54200 unknown 0.180 -0.135
33 265249_at AT2G01940 ATIDD15, ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15, SGR5, SHOOT GRAVITROPISM 5 0.176 -0.112
34 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.176 -0.051
35 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 0.173 0.041
36 265726_at AT2G32010 CVL1, CVP2 like 1 0.170 -0.155
37 259689_x_at AT1G63130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.168 -0.017
38 266899_at AT2G34620 [Mitochondrial transcription termination factor family protein] 0.167 -0.157
39 253207_at AT4G34770 SAUR1, SMALL AUXIN UPREGULATED RNA 1 0.166 0.071
40 260266_at AT1G68520 BBX14, B-box domain protein 14 0.166 -0.037
41 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] 0.163 0.214
42 245242_at AT1G44446 ATCAO, ARABIDOPSIS THALIANA CHLOROPHYLL A OXYGENASE, CAO, CHLOROPHYLL A OXYGENASE, CH1, CHLORINA 1 0.159 -0.160
43 248208_at AT5G53980 ATHB52, homeobox protein 52, HB52, homeobox protein 52 0.159 0.026
44 246142_at AT5G19970 unknown 0.158 -0.086
45 262399_at AT1G49500 unknown 0.158 -0.152
46 253812_at AT4G28240 [Wound-responsive family protein] 0.156 -0.046
47 267158_at AT2G37640 ATEXP3, EXPANSIN 3, ATEXPA3, ARABIDOPSIS THALIANA EXPANSIN A3, ATHEXP ALPHA 1.9, EXP3 0.156 0.017
48 267580_at AT2G41990 unknown 0.154 -0.204
49 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 0.153 -0.026
50 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 0.150 -0.172
51 255648_at AT4G00910 [Aluminium activated malate transporter family protein] 0.149 0.008
52 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.147 -0.037
53 248167_at AT5G54530 unknown 0.141 -0.034
54 259182_at AT3G01750 [Ankyrin repeat family protein] 0.141 -0.183
55 267271_at AT2G02540 ATHB21, homeobox protein 21, HB21, homeobox protein 21, ZFHD4, ZINC FINGER HOMEODOMAIN 4, ZHD3, ZINC FINGER HOMEODOMAIN 3 0.140 -0.039
56 255652_at AT4G00950 MEE47, maternal effect embryo arrest 47 0.140 -0.078
57 256454_at AT1G75280 [NmrA-like negative transcriptional regulator family protein] -1.434 0.116
58 256453_at AT1G75270 DHAR2, dehydroascorbate reductase 2 -1.190 0.187
59 255068_at AT4G08920 ATCRY1, BLU1, BLUE LIGHT UNINHIBITED 1, CRY1, cryptochrome 1, HY4, ELONGATED HYPOCOTYL 4, OOP2, OUT OF PHASE 2 -0.836 -0.147
60 256452_at AT1G75240 AtHB33, homeobox protein 33, HB33, homeobox protein 33, ZHD5, zinc-finger homeodomain 5 -0.683 -0.030
61 257595_at AT3G24750 unknown -0.539 -0.009
62 249843_at AT5G23570 ATSGS3, SUPPRESSOR OF GENE SILENCING 3, SGS3, SUPPRESSOR OF GENE SILENCING 3 -0.486 0.048
63 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 -0.471 0.134
64 256509_at AT1G75300 [NmrA-like negative transcriptional regulator family protein] -0.438 0.329
65 253496_at AT4G31870 ATGPX7, GLUTATHIONE PEROXIDASE 7, GPX7, glutathione peroxidase 7 -0.430 0.172
66 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] -0.410 0.096
67 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.322 0.005
68 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] -0.304 0.392
69 256386_at AT1G66540 [Cytochrome P450 superfamily protein] -0.301 0.100
70 246966_at AT5G24850 CRY3, cryptochrome 3 -0.297 0.079
71 250049_at AT5G17780 [alpha/beta-Hydrolases superfamily protein] -0.295 0.300
72 265510_at AT2G05630 ATG8D -0.292 0.026
73 245560_at AT4G15480 UGT84A1 -0.278 0.032
74 248347_at AT5G52250 EFO1, EARLY FLOWERING BY OVEREXPRESSION 1, RUP1, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 -0.277 -0.084
75 245126_at AT2G47460 ATMYB12, MYB DOMAIN PROTEIN 12, MYB12, myb domain protein 12, PFG1, PRODUCTION OF FLAVONOL GLYCOSIDES 1 -0.264 -0.008
76 265634_at AT2G25530 [AFG1-like ATPase family protein] -0.260 0.135
77 264752_at AT1G23010 LPR1, Low Phosphate Root1 -0.254 0.107
78 262750_at AT1G28710 [Nucleotide-diphospho-sugar transferase family protein] -0.250 -0.042
79 267036_at AT2G38465 unknown -0.246 0.013
80 249497_at AT5G39220 [alpha/beta-Hydrolases superfamily protein] -0.235 0.008
81 247463_at AT5G62210 [Embryo-specific protein 3, (ATS3)] -0.225 0.195
82 267070_at AT2G41000 [Chaperone DnaJ-domain superfamily protein] -0.218 0.036
83 247641_at AT5G60540 ATPDX2, PYRIDOXINE BIOSYNTHESIS 2, EMB2407, EMBRYO DEFECTIVE 2407, PDX2, pyridoxine biosynthesis 2 -0.216 0.031
84 258349_at AT3G17609 HYH, HY5-homolog -0.208 0.014
85 261443_at AT1G28480 GRX480, roxy19 -0.206 0.005
86 263918_at AT2G36590 ATPROT3, PROLINE TRANSPORTER 3, ProT3, proline transporter 3 -0.205 0.069
87 254327_at AT4G22490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.204 -0.035
88 250420_at AT5G11260 HY5, ELONGATED HYPOCOTYL 5, TED 5, REVERSAL OF THE DET PHENOTYPE 5 -0.202 0.003
89 254430_at AT4G20820 [FAD-binding Berberine family protein] -0.202 -0.093
90 264287_at AT1G61930 unknown -0.201 0.110
91 248049_at AT5G56090 COX15, cytochrome c oxidase 15 -0.201 0.144
92 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.200 0.334
93 260035_at AT1G68850 [Peroxidase superfamily protein] -0.195 -0.005
94 256816_at AT3G21400 unknown -0.191 0.070
95 266383_at AT2G14580 ATPRB1, basic pathogenesis-related protein 1, PRB1, basic pathogenesis-related protein 1 -0.189 0.091
96 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 -0.188 0.329
97 252383_at AT3G47780 ABCA7, ATP-binding cassette A7, ATATH6, A. THALIANA ABC2 HOMOLOG 6, ATH6, ABC2 homolog 6 -0.176 0.126
98 267066_at AT2G41040 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.175 0.044
99 259537_at AT1G12370 PHR1, photolyase 1, UVR2, UV RESISTANCE 2 -0.173 0.053
100 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 -0.171 -0.026
101 247326_at AT5G64110 [Peroxidase superfamily protein] -0.171 -0.150
102 251020_at AT5G02270 ABCI20, ATP-binding cassette I20, ATNAP9, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 9, NAP9, non-intrinsic ABC protein 9 -0.166 0.056
103 251062_at AT5G01840 ATOFP1, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, OFP1, ovate family protein 1 -0.166 -0.030
104 252010_at AT3G52740 unknown -0.163 0.003
105 255596_at AT4G01720 AtWRKY47, WRKY47 -0.163 0.002
106 252629_at AT3G44970 [Cytochrome P450 superfamily protein] -0.162 -0.034
107 264637_at AT1G65560 [Zinc-binding dehydrogenase family protein] -0.162 0.077
108 261514_at AT1G71870 [MATE efflux family protein] -0.162 -0.017
109 262748_at AT1G28610 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.162 0.193
110 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 -0.161 0.235
111 251422_at AT3G60540 [Preprotein translocase Sec, Sec61-beta subunit protein] -0.156 -0.017