4.0:Information of module
Mutant cry1
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010162 seed dormancy process BP 1.360e-05
GO:0022611 dormancy process BP 1.360e-05
GO:0010431 seed maturation BP 6.252e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009812 flavonoid metabolic process BP 1.171e-06
GO:0009813 flavonoid biosynthetic process BP 1.311e-06
GO:0009695 jasmonic acid biosynthetic process BP 4.153e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant cry1		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 253767_at AT4G28520 CRC, CRUCIFERIN C, CRU3, cruciferin 3 0.884 -1.048
2 257947_at AT3G21720 ICL, isocitrate lyase 0.303 -0.855
3 247474_at AT5G62280 unknown 0.276 -0.499
4 250013_at AT5G18040 unknown 0.268 1.604
5 255048_at AT4G09600 GASA3, GAST1 protein homolog 3 0.267 -0.993
6 253689_at AT4G29770 unknown 0.266 -1.103
7 264734_at AT1G62280 SLAH1, SLAC1 homologue 1 0.264 -0.973
8 247643_at AT5G60450 ARF4, auxin response factor 4 0.263 0.969
9 259578_at AT1G27990 unknown 0.246 -0.743
10 246299_at AT3G51810 AT3, ATEM1, ARABIDOPSIS THALIANA LATE EMBRYOGENESIS ABUNDANT 1, EM1, LATE EMBRYOGENESIS ABUNDANT 1, GEA1, GUANINE NUCLEOTIDE EXCHANGE FACTOR FOR ADP RIBOSYLATION FACTORS 1 0.233 -0.302
11 250327_at AT5G12050 unknown 0.228 -0.615
12 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 0.226 -0.475
13 251013_at AT5G02540 [NAD(P)-binding Rossmann-fold superfamily protein] 0.199 0.114
14 262388_at AT1G49320 unknown 0.174 -0.690
15 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.169 -1.104
16 267452_at AT2G33860 ARF3, AUXIN RESPONSE TRANSCRIPTION FACTOR 3, ETT, ETTIN 0.165 1.229
17 257994_at AT3G19920 unknown 0.164 -0.043
18 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) 0.160 0.168
19 254743_at AT4G13420 ATHAK5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, HAK5, high affinity K+ transporter 5 0.159 -0.382
20 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 0.159 -0.001
21 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.154 -0.907
22 252965_at AT4G38860 SAUR16, SMALL AUXIN UPREGULATED RNA 16 0.149 -0.666
23 246932_at AT5G25190 ESE3, ethylene and salt inducible 3 0.140 -0.652
24 253723_at AT4G29240 [Leucine-rich repeat (LRR) family protein] 0.133 0.079
25 256454_at AT1G75280 [NmrA-like negative transcriptional regulator family protein] -1.256 0.078
26 256453_at AT1G75270 DHAR2, dehydroascorbate reductase 2 -1.108 0.092
27 255068_at AT4G08920 ATCRY1, BLU1, BLUE LIGHT UNINHIBITED 1, CRY1, cryptochrome 1, HY4, ELONGATED HYPOCOTYL 4, OOP2, OUT OF PHASE 2 -0.987 0.374
28 256452_at AT1G75240 AtHB33, homeobox protein 33, HB33, homeobox protein 33, ZHD5, zinc-finger homeodomain 5 -0.746 0.753
29 249843_at AT5G23570 ATSGS3, SUPPRESSOR OF GENE SILENCING 3, SGS3, SUPPRESSOR OF GENE SILENCING 3 -0.487 0.639
30 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 -0.412 -0.653
31 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 -0.383 -0.723
32 256509_at AT1G75300 [NmrA-like negative transcriptional regulator family protein] -0.309 0.139
33 265510_at AT2G05630 ATG8D -0.294 0.371
34 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 -0.235 -0.835
35 256710_at AT3G30350 GLV3, GOLVEN 3, RGF4, root meristem growth factor 4 -0.229 -0.421
36 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] -0.203 0.124
37 265569_at AT2G05620 AtPGR5, PGR5, proton gradient regulation 5 -0.189 0.721
38 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A -0.177 -0.045
39 247459_at AT5G62200 [Embryo-specific protein 3, (ATS3)] -0.170 0.288
40 258982_at AT3G08870 LecRK-VI.1, L-type lectin receptor kinase VI.1 -0.138 -0.815
41 247577_at AT5G61290 [Flavin-binding monooxygenase family protein] -0.131 0.257
42 266561_at AT2G23960 [Class I glutamine amidotransferase-like superfamily protein] -0.127 -1.171
43 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.125 0.189
44 261012_at AT1G26600 CLE9, CLAVATA3/ESR-RELATED 9 -0.117 -1.146
45 257034_at AT3G19184 [AP2/B3-like transcriptional factor family protein] -0.116 0.585
46 245460_at AT4G16990 RLM3, RESISTANCE TO LEPTOSPHAERIA MACULANS 3 -0.114 -0.173
47 252733_at AT3G43120 SAUR39, SMALL AUXIN UPREGULATED RNA 39 -0.112 -1.043