4.0:Information of module
Mutant NahG(leaf)
In comparison with Red/FR Light45min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006950 response to stress BP 3.725e-10
GO:0050896 response to stimulus BP 2.424e-09
GO:1901700 response to oxygen-containing compound BP 2.276e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 8.458e-62
GO:0045087 innate immune response BP 1.254e-60
GO:0002376 immune system process BP 1.979e-60
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Mutant NahG(leaf)		 Log2 signal ratio
Red/FR Light45min
1 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 1.388 0.004
2 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 1.075 -0.016
3 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 1.020 -0.019
4 265586_at AT2G19990 PR-1-LIKE, pathogenesis-related protein-1-like 0.994 -0.032
5 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 0.906 0.093
6 256527_at AT1G66100 [Plant thionin] 0.885 0.040
7 245422_at AT4G17470 [alpha/beta-Hydrolases superfamily protein] 0.879 0.009
8 259802_at AT1G72260 THI2.1, thionin 2.1, THI2.1.1 0.831 -0.049
9 252639_at AT3G44550 FAR5, fatty acid reductase 5 0.819 -0.008
10 256577_at AT3G28220 [TRAF-like family protein] 0.764 0.052
11 257365_x_at AT2G26020 PDF1.2b, plant defensin 1.2b 0.693 -0.008
12 249052_at AT5G44420 LCR77, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 77, PDF1.2, plant defensin 1.2, PDF1.2A, PLANT DEFENSIN 1.2A 0.687 0.011
13 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 0.679 0.006
14 266215_at AT2G06850 EXGT-A1, endoxyloglucan transferase A1, EXT, ENDOXYLOGLUCAN TRANSFERASE, XTH4, xyloglucan endotransglucosylase/hydrolase 4 0.671 0.007
15 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 0.666 0.017
16 259009_at AT3G09260 BGLU23, LEB, LONG ER BODY, PSR3.1, PYK10 0.662 0.008
17 265083_at AT1G03820 unknown 0.655 -0.010
18 254726_at AT4G13660 ATPRR2, PRR2, pinoresinol reductase 2 0.647 0.017
19 263431_at AT2G22170 PLAT2, PLAT domain protein 2 0.613 -0.005
20 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 0.606 0.006
21 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.606 -0.011
22 266989_at AT2G39330 JAL23, jacalin-related lectin 23 0.602 -0.047
23 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 0.580 0.038
24 260028_at AT1G29980 unknown 0.566 -0.021
25 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.549 0.012
26 266168_at AT2G38870 [Serine protease inhibitor, potato inhibitor I-type family protein] 0.525 -0.030
27 256159_at AT1G30135 JAZ8, jasmonate-zim-domain protein 8, TIFY5A 0.475 0.014
28 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 0.475 0.023
29 255186_at AT4G07750 [CACTA-like transposase family (Tnp2/En/Spm), has a 2.9e-168 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative] 0.474 0.002
30 257673_at AT3G20370 [TRAF-like family protein] 0.462 0.008
31 259383_at AT3G16470 JAL35, jacalin-related lectin 35, JR1, JASMONATE RESPONSIVE 1 0.460 0.017
32 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 0.459 0.018
33 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 0.430 0.005
34 263031_at AT1G24070 ATCSLA10, cellulose synthase-like A10, CSLA10, CELLULOSE SYNTHASE LIKE A10, CSLA10, cellulose synthase-like A10 0.424 -0.011
35 260560_at AT2G43590 [Chitinase family protein] 0.404 -0.043
36 246550_at AT5G14920 GASA14, A-stimulated in Arabidopsis 14 0.396 0.002
37 263515_at AT2G21640 unknown 0.372 0.002
38 255285_at AT4G04630 unknown 0.366 -0.046
39 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.364 -0.018
40 256321_at AT1G55020 ATLOX1, ARABIDOPSIS LIPOXYGENASE 1, LOX1, lipoxygenase 1 0.362 -0.038
41 249073_at AT5G44020 [HAD superfamily, subfamily IIIB acid phosphatase ] 0.352 0.003
42 253073_at AT4G37410 CYP81F4, cytochrome P450, family 81, subfamily F, polypeptide 4 0.349 0.016
43 257809_at AT3G27060 ATTSO2, TSO2, TSO MEANING 'UGLY' IN CHINESE 2 0.345 -0.010
44 245393_at AT4G16260 [Glycosyl hydrolase superfamily protein] 0.338 -0.029
45 250443_at AT5G10520 RBK1, ROP binding protein kinases 1 0.326 0.007
46 266418_at AT2G38750 ANNAT4, annexin 4, AtANN4 0.322 0.014
47 254815_at AT4G12420 SKU5 0.321 -0.021
48 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.321 -0.045
49 254761_at AT4G13195 CLE44, CLAVATA3/ESR-RELATED 44 0.317 -0.055
50 266905_at AT2G34560 AtCCP1, CCP1, conserved in ciliated species and in the land plants 1 0.307 0.031
51 257946_at AT3G21710 unknown 0.305 0.034
52 260541_at AT2G43530 [Scorpion toxin-like knottin superfamily protein] 0.301 -0.009
53 246030_at AT5G21105 [Plant L-ascorbate oxidase] 0.297 0.002
54 259375_at AT3G16370 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.295 0.001
55 253617_at AT4G30410 [sequence-specific DNA binding transcription factors] 0.292 0.005
56 256441_at AT3G10940 LSF2, LIKE SEX4 2 0.285 0.027
57 263693_at AT1G31200 ATPP2-A9, phloem protein 2-A9, PP2-A9, phloem protein 2-A9 0.279 -0.019
58 247577_at AT5G61290 [Flavin-binding monooxygenase family protein] 0.277 -0.019
59 258054_at AT3G16240 AQP1, ATTIP2;1, DELTA-TIP, delta tonoplast integral protein, DELTA-TIP1, TIP2;1 0.275 -0.008
60 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 0.270 0.017
61 247069_at AT5G66920 sks17, SKU5 similar 17 0.261 0.008
62 256913_at AT3G23870 unknown 0.260 -0.008
63 262637_at AT1G06640 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.253 0.010
64 255104_at AT4G08685 SAH7 0.247 0.005
65 247162_at AT5G65730 XTH6, xyloglucan endotransglucosylase/hydrolase 6 0.246 -0.020
66 262414_at AT1G49430 LACS2, long-chain acyl-CoA synthetase 2, LRD2, LATERAL ROOT DEVELOPMENT 2 0.245 -0.007
67 254914_at AT4G11290 [Peroxidase superfamily protein] 0.241 -0.001
68 252391_at AT3G47860 CHL, chloroplastic lipocalin 0.241 0.028
69 248622_at AT5G49360 ATBXL1, BETA-XYLOSIDASE 1, BXL1, beta-xylosidase 1 0.225 0.004
70 257206_at AT3G16530 [Legume lectin family protein] 0.225 -0.061
71 253627_at AT4G30650 [Low temperature and salt responsive protein family] 0.223 0.025
72 265149_at AT1G51400 [Photosystem II 5 kD protein] 0.223 0.017
73 259384_at AT3G16450 JAL33, Jacalin-related lectin 33 0.221 -0.000
74 259431_at AT1G01620 PIP1;3, PLASMA MEMBRANE INTRINSIC PROTEIN 1;3, PIP1C, plasma membrane intrinsic protein 1C, TMP-B 0.221 -0.007
75 253049_at AT4G37300 MEE59, maternal effect embryo arrest 59 0.217 -0.014
76 259366_at AT1G13280 AOC4, allene oxide cyclase 4 0.213 -0.009
77 265114_at AT1G62440 LRX2, leucine-rich repeat/extensin 2 0.208 0.019
78 248139_at AT5G54970 unknown 0.208 0.006
79 262694_at AT1G62790 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.208 0.014
80 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 -1.322 0.028
81 248322_at AT5G52760 [Copper transport protein family] -1.293 -0.042
82 256593_at AT3G28510 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -1.255 -0.027
83 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 -1.241 0.012
84 250942_at AT5G03350 [Legume lectin family protein] -1.238 -0.041
85 259559_at AT1G21240 WAK3, wall associated kinase 3 -1.234 -0.017
86 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 -1.231 -0.028
87 261221_at AT1G19960 unknown -1.224 -0.074
88 248169_at AT5G54610 ANK, ankyrin, BDA1, bian da 2 (becoming big in Chinese) -1.206 0.004
89 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA -1.160 -0.056
90 257100_at AT3G25010 AtRLP41, receptor like protein 41, RLP41, receptor like protein 41 -1.116 0.011
91 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 -1.110 0.017
92 259385_at AT1G13470 unknown -1.082 -0.018
93 260116_at AT1G33960 AIG1, AVRRPT2-INDUCED GENE 1 -1.073 0.048
94 245035_at AT2G26400 ARD, ACIREDUCTONE DIOXYGENASE, ARD3, acireductone dioxygenase 3, ATARD3, acireductone dioxygenase 3 -1.052 -0.020
95 253730_at AT4G29480 [Mitochondrial ATP synthase subunit G protein] -1.021 0.018
96 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 -1.005 -0.007
97 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 -0.976 -0.018
98 255341_at AT4G04500 CRK37, cysteine-rich RLK (RECEPTOR-like protein kinase) 37 -0.950 0.007
99 265161_at AT1G30900 BP80-3;3, binding protein of 80 kDa 3;3, VSR3;3, VACUOLAR SORTING RECEPTOR 3;3, VSR6, VACUOLAR SORTING RECEPTOR 6 -0.946 0.002
100 267546_at AT2G32680 AtRLP23, receptor like protein 23, RLP23, receptor like protein 23 -0.944 0.036
101 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 -0.939 0.028
102 254229_at AT4G23610 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.918 -0.031
103 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 -0.916 -0.010
104 254975_at AT4G10500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.908 0.023
105 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 -0.898 -0.002
106 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 -0.895 -0.033
107 248062_at AT5G55450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.893 -0.024
108 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] -0.876 -0.052
109 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] -0.857 -0.061
110 257591_at AT3G24900 AtRLP39, receptor like protein 39, RLP39, receptor like protein 39 -0.857 0.012
111 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 -0.857 -0.008
112 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 -0.855 -0.029
113 252060_at AT3G52430 ATPAD4, ARABIDOPSIS PHYTOALEXIN DEFICIENT 4, PAD4, PHYTOALEXIN DEFICIENT 4 -0.832 -0.049
114 254231_at AT4G23810 ATWRKY53, WRKY53 -0.816 -0.013
115 254869_at AT4G11890 ARCK1, ABA- AND OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1, CRK45, cysteine-rich receptor-like protein kinase 45 -0.799 -0.009
116 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 -0.796 -0.032
117 255595_at AT4G01700 [Chitinase family protein] -0.790 0.003
118 247684_at AT5G59670 [Leucine-rich repeat protein kinase family protein] -0.789 -0.017
119 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana -0.778 0.004
120 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 -0.752 -0.031
121 245052_at AT2G26440 PME12, pectin methylesterase 12 -0.750 -0.091
122 252345_at AT3G48640 unknown -0.742 -0.032
123 249417_at AT5G39670 [Calcium-binding EF-hand family protein] -0.742 -0.088
124 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 -0.737 -0.022
125 250302_at AT5G11920 AtcwINV6, 6-&1-fructan exohydrolase, cwINV6, 6-&1-fructan exohydrolase -0.732 -0.018
126 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 -0.730 -0.024
127 247314_at AT5G64000 ATSAL2, SAL2 -0.723 0.017
128 247602_at AT5G60900 RLK1, receptor-like protein kinase 1 -0.722 -0.013
129 249743_at AT5G24540 BGLU31, beta glucosidase 31 -0.717 0.014
130 259550_at AT1G35230 AGP5, arabinogalactan protein 5 -0.716 -0.037
131 252417_at AT3G47480 [Calcium-binding EF-hand family protein] -0.709 -0.029
132 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] -0.695 -0.015
133 249918_at AT5G19240 [Glycoprotein membrane precursor GPI-anchored] -0.694 0.036
134 264434_at AT1G10340 [Ankyrin repeat family protein] -0.694 -0.038
135 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis -0.690 0.027
136 248321_at AT5G52740 [Copper transport protein family] -0.655 0.014
137 251970_at AT3G53150 UGT73D1, UDP-glucosyl transferase 73D1 -0.651 -0.052
138 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] -0.649 -0.089
139 246405_at AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.627 -0.035
140 249777_at AT5G24210 [alpha/beta-Hydrolases superfamily protein] -0.618 -0.026
141 254416_at AT4G21380 ARK3, receptor kinase 3, RK3, receptor kinase 3 -0.615 -0.026
142 259805_at AT1G47890 AtRLP7, receptor like protein 7, RLP7, receptor like protein 7 -0.609 -0.026
143 256366_at AT1G66880 [Protein kinase superfamily protein] -0.601 0.003
144 262666_at AT1G14080 ATFUT6, FUT6, fucosyltransferase 6 -0.598 -0.002
145 261443_at AT1G28480 GRX480, roxy19 -0.591 -0.007
146 259560_at AT1G21270 WAK2, wall-associated kinase 2 -0.584 0.001
147 266761_at AT2G47130 AtSDR3, SDR3, short-chain dehydrogenase/reductase 2 -0.579 0.026
148 265723_at AT2G32140 [transmembrane receptors] -0.575 0.032
149 263852_at AT2G04450 ATNUDT6, nudix hydrolase homolog 6, ATNUDX6, Arabidopsis thaliana nucleoside diphosphate linked to some moiety X 6, NUDT6, nudix hydrolase homolog 6, NUDX6, nucleoside diphosphates linked to some moiety X 6 -0.575 -0.018
150 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 -0.575 -0.060
151 266782_at AT2G29120 ATGLR2.7, glutamate receptor 2.7, GLR2.7, GLUTAMATE RECEPTOR 2.7, GLR2.7, glutamate receptor 2.7 -0.570 -0.080
152 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 -0.565 -0.042
153 264223_s_at AT3G16030 CES101, CALLUS EXPRESSION OF RBCS 101, RFO3, RESISTANCE TO FUSARIUM OXYSPORUM 3 -0.563 0.038
154 246988_at AT5G67340 [ARM repeat superfamily protein] -0.552 -0.044
155 262507_at AT1G11330 [S-locus lectin protein kinase family protein] -0.549 -0.003
156 254660_at AT4G18250 [receptor serine/threonine kinase, putative] -0.543 -0.010
157 252373_at AT3G48090 ATEDS1, EDS1, enhanced disease susceptibility 1 -0.534 -0.008