4.0:Information of module
rdr6-11
In comparison with elevated CO2 high Mg shoot help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 3.089e-30
GO:0010243 response to organonitrogen compound BP 1.297e-29
GO:1901698 response to nitrogen compound BP 2.397e-22
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 1.627e-67
GO:0019684 photosynthesis, light reaction BP 3.971e-64
GO:0006091 generation of precursor metabolites and ... BP 8.170e-55
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rdr6-11		 Log2 signal ratio
elevated CO2 high Mg shoot
1 AT2G21360 AT2G21360 [tRNA-Pro (anticodon: CGG)] 5.959 -0.467
2 AT4G21370 AT4G21370 pseudogene 4.674 -0.467
3 AT4G33100 AT4G33100 unknown 3.445 -0.039
4 AT2G15340 AT2G15340 [glycine-rich protein] 3.383 -0.467
5 AT5G40020 AT5G40020 [Pathogenesis-related thaumatin superfamily protein] 3.200 0.620
6 AT2G04990 AT2G04990 unknown 3.056 -0.467
7 AT3G44096 AT3G44096 [non-LTR retrotransposon family (LINE), has a 4.8e-23 P-value blast match to GB:AAA67727 reverse transcriptase (LINE-element) (Mus musculus)] 2.914 0.055
8 AT3G42600 AT3G42600 unknown 2.859 -0.467
9 AT3G43640 AT3G43640 [copia-like retrotransposon family, has a 1.4e-25 P-value blast match to gb|AAG52950.1| putative envelope protein (Endovir1-1) (Arabidopsis thaliana) (Ty1_Copia-family)] 2.779 -0.467
10 AT1G62045 AT1G62045 unknown 2.743 -0.923
11 AT3G26610 AT3G26610 [Pectin lyase-like superfamily protein] 2.702 -0.467
12 AT1G43660 AT1G43660 unknown 2.697 -0.467
13 AT1G77640 AT1G77640 [Integrase-type DNA-binding superfamily protein] 2.692 2.447
14 AT4G04635 AT4G04635 unknown 2.692 -0.467
15 AT5G37080 AT5G37080 unknown 2.665 -0.467
16 AT1G64340 AT1G64340 unknown 2.632 -0.467
17 AT3G28695 AT3G28695 [tRNA-Ala (anticodon: AGC)] 2.603 -0.467
18 AT4G23387 AT4G23387 MIR845A, microRNA845A 2.547 -0.467
19 AT1G35140 AT1G35140 EXL1, EXORDIUM like 1, PHI-1, PHOSPHATE-INDUCED 1 2.544 -0.925
20 AT1G35940 AT1G35940 unknown 2.534 -0.467
21 AT4G06549 AT4G06549 [pseudogene] 2.515 -0.467
22 AT5G29058 AT5G29058 [pseudogene] 2.482 -0.467
23 AT2G07300 AT2G07300 unknown 2.481 -0.467
24 AT1G43763 AT1G43763 [copia-like retrotransposon family, has a 1.9e-96 P-value blast match to GB:AAB82754 retrofit (TY1_Copia-element) (Oryza longistaminata)] 2.433 -0.467
25 AT4G06496 AT4G06496 [pseudogene] 2.429 -0.467
26 AT5G35348 AT5G35348 [pseudogene] 2.424 -0.467
27 AT5G33990 AT5G33990 [gypsy-like retrotransposon family (Athila), has a 5.0e-73 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 2.393 -0.467
28 AT4G25810 AT4G25810 XTH23, xyloglucan endotransglucosylase/hydrolase 23, XTR6, xyloglucan endotransglycosylase 6 2.389 0.921
29 AT3G50350 AT3G50350 unknown 2.387 0.606
30 AT4G06522 AT4G06522 [non-LTR retrotransposon family (LINE), has a 1.2e-22 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus)] 2.373 -0.467
31 AT5G35475 AT5G35475 [General transcription factor 2-related zinc finger protein] 2.363 -0.467
32 AT2G12870 AT2G12870 [gypsy-like retrotransposon family, has a 3.8e-07 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 2.356 -0.467
33 AT5G35695 AT5G35695 unknown 2.336 -0.467
34 AT5G28527 AT5G28527 [pseudogene] 2.334 -0.467
35 AT3G42723 AT3G42723 [aminoacyl-tRNA ligases] 2.306 -0.467
36 AT5G35640 AT5G35640 [Putative endonuclease or glycosyl hydrolase] 2.298 -0.467
37 AT1G56675 AT1G56675 [copia-like retrotransposon family, has a 1.7e-196 P-value blast match to GB:AAC02666 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 2.286 -0.467
38 AT5G28667 AT5G28667 [pseudogene] 2.286 -0.467
39 AT3G33115 AT3G33115 [gypsy-like retrotransposon family, has a 2.9e-169 P-value blast match to GB:AAD11615 prpol (gypsy_Ty3-element) (Zea mays)] 2.280 -0.467
40 AT3G45840 AT3G45840 [Cysteine/Histidine-rich C1 domain family protein] 2.253 -0.467
41 AT5G28930 AT5G28930 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT2G07240.1)] 2.248 -0.467
42 AT5G35965 AT5G35965 [copia-like retrotransposon family, has a 5.9e-244 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] 2.240 -1.006
43 AT1G35990 AT1G35990 [non-LTR retrotransposon family (LINE), has a 1.2e-23 P-value blast match to GB:NP_038602 L1 repeat, Tf subfamily, member 18 (LINE-element) (Mus musculus)] 2.240 -0.467
44 AT4G07519 AT4G07519 [pseudogene] 2.223 -0.467
45 AT3G43260 AT3G43260 unknown 2.221 -0.467
46 AT4G18410 AT4G18410 [Mutator-like transposase family, has a 8.7e-30 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] 2.213 -1.398
47 AT3G33073 AT3G33073 transposable element gene 2.213 -0.467
48 AT5G35923 AT5G35923 [gypsy-like retrotransposon family (Athila), has a 2.6e-33 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 2.200 -0.467
49 AT1G37000 AT1G37000 [Beta-galactosidase related protein] 2.183 -0.467
50 AT3G42870 AT3G42870 unknown 2.179 -0.467
51 AT5G36300 AT5G36300 [Tetratricopeptide repeat (TPR)-like superfamily protein] 2.175 -0.467
52 AT3G43126 AT3G43126 [CACTA-like transposase family (En/Spm), has a 6.3e-145 P-value blast match to GB:AAD55677 putative transposase protein (CACTA-element) transposon=Shooter (Zea mays)] 2.174 -0.467
53 AT5G29591 AT5G29591 [Mutator-like transposase family, has a 1.4e-14 P-value blast match to Q9XE24 /118-277 Pfam PF03108 MuDR family transposase (MuDr-element domain)] 2.172 -0.467
54 AT3G29033 AT3G29033 [glycine-rich protein] 2.170 -0.467
55 AT5G32518 AT5G32518 [gypsy-like retrotransposon family, has a 1.5e-246 P-value blast match to GB:CAA73042 polyprotein (Gypsy_Ty3-element) (Ananas comosus)] 2.170 -0.467
56 AT3G53065 AT3G53065 [D-galactoside/L-rhamnose binding SUEL lectin protein] 2.167 -2.175
57 AT5G35720 AT5G35720 [non-LTR retrotransposon family (LINE), has a 6.9e-12 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] 2.133 -0.467
58 AT5G66070 AT5G66070 [RING/U-box superfamily protein] 2.132 -0.334
59 AT2G14390 AT2G14390 unknown 2.130 -0.467
60 AT4G06570 AT4G06570 [CACTA-like transposase family (Ptta/En/Spm), has a 4.3e-26 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 2.118 -0.467
61 AT2G12340 AT2G12340 [non-LTR retrotransposon family (LINE), has a 2.6e-31 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus)] 2.113 -0.467
62 AT1G62670 AT1G62670 RPF2, rna processing factor 2 2.112 0.415
63 AT4G03835 AT4G03835 [gypsy-like retrotransposon family, has a 6.1e-78 P-value blast match to GB:BAA84458 GAG-POL precursor (gypsy_Ty3-element) (Oryza sativa)gi|5902445|dbj|BAA84458.1| GAG-POL precursor (Oryza sativa (japonica cultivar-group)) (RIRE2) (Gypsy_Ty3-family)] 2.104 -0.467
64 AT3G44230 AT3G44230 unknown 2.102 -0.467
65 AT4G06556 AT4G06556 [CACTA-like transposase family (Tnp2/En/Spm), has a 3.3e-152 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative] 2.076 -0.467
66 AT5G03400 AT5G03400 unknown 2.075 -0.467
67 AT3G30213 AT3G30213 [gypsy-like retrotransposon family (Athila), has a 3.2e-53 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 2.066 -0.467
68 AT5G35526 AT5G35526 unknown 2.062 -0.467
69 AT4G06497 AT4G06497 [non-LTR retrotransposon family (LINE), has a 5.0e-48 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)] 2.057 -0.467
70 AT3G33124 AT3G33124 [gypsy-like retrotransposon family (Athila), has a 6.5e-171 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 2.051 -0.467
71 AT5G28821 AT5G28821 unknown 2.044 -0.467
72 AT3G31402 AT3G31402 [General transcription factor 2-related zinc finger protein] 2.039 -0.467
73 AT4G06597 AT4G06597 [pseudogene] 2.039 -0.556
74 AT4G06595 AT4G06595 [copia-like retrotransposon family, has a 5.3e-49 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] 2.032 -0.467
75 AT2G06110 AT2G06110 [gypsy-like retrotransposon family (Athila), has a 6.4e-72 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 2.030 -0.467
76 AT3G30560 AT3G30560 [similar to AT hook motif-containing protein-related [Arabidopsis thaliana] (TAIR:AT1G35940.1)] 2.029 -0.467
77 AT3G33079 AT3G33079 [gypsy-like retrotransposon family (Athila), has a 1.7e-203 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 2.016 -0.467
78 AT1G67105 AT1G67105 other RNA 2.014 0.782
79 AT1G21202 AT1G21202 MIR781A, microRNA781A 2.012 -0.467
80 AT1G41790 AT1G41790 [gypsy-like retrotransposon family, has a 0.00017 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 1.996 -0.467
81 AT4G10980 AT4G10980 [copia-like retrotransposon family, has a 2.7e-44 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] 1.991 -0.467
82 AT5G31496 AT5G31496 [gypsy-like retrotransposon family, has a 8.1e-10 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 1.991 -0.467
83 AT1G41810 AT1G41810 unknown 1.990 -0.467
84 AT4G07425 AT4G07425 [CACTA-like transposase family (Tnp1/En/Spm), has a 2.5e-22 P-value blast match to ref|NP_189784.1| TNP1-related protein (Arabidopsis thaliana) (CACTA-element)] 1.989 -0.467
85 AT5G32590 AT5G32590 [myosin heavy chain-related] 1.978 -0.467
86 AT5G28970 AT5G28970 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G35110.1)] 1.974 -0.467
87 AT1G42605 AT1G42605 [gypsy-like retrotransposon family, has a 5.9e-318 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 1.960 -0.467
88 AT5G29337 AT5G29337 [gypsy-like retrotransposon family (Athila), has a 2.7e-77 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 1.952 -0.467
89 AT4G14504 AT4G14504 MIR852A, microRNA852A 1.952 -0.467
90 AT3G30703 AT3G30703 [gypsy-like retrotransposon family, has a 6.1e-20 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 1.941 -0.467
91 AT1G47360 AT1G47360 [copia-like retrotransposon family, has a 1.2e-307 P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 1.940 -0.467
92 AT4G06488 AT4G06488 [gypsy-like retrotransposon family, has a 3.5e-167 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 1.939 -0.467
93 AT2G11168 AT2G11168 [pseudogene] 1.939 -0.467
94 AT4G21940 AT4G21940 CPK15, calcium-dependent protein kinase 15 1.937 -0.426
95 AT5G30218 AT5G30218 [gypsy-like retrotransposon family (Athila), has a 3.3e-30 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 1.937 -0.467
96 AT1G35617 AT1G35617 unknown 1.934 -0.467
97 AT4G07733 AT4G07733 [gypsy-like retrotransposon family (Athila), has a 2.5e-37 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 1.929 -0.467
98 AT4G03690 AT4G03690 unknown 1.928 -0.467
99 AT2G10320 AT2G10320 [gypsy-like retrotransposon family (Athila), has a 2.3e-75 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 1.924 -0.467
100 AT3G44115 AT3G44115 unknown 1.923 -0.467
101 AT1G48840 AT1G48840 unknown 1.922 0.499
102 AT1G43330 AT1G43330 [Homeodomain-like superfamily protein] 1.919 -0.467
103 AT4G07528 AT4G07528 [gypsy-like retrotransposon family, has a 1.6e-141 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 1.912 -0.467
104 AT5G36080 AT5G36080 unknown 1.906 -0.467
105 AT4G03670 AT4G03670 unknown 1.903 -0.467
106 AT3G42445 AT3G42445 [Athila retroelement ORF2 -related] 1.901 -0.467
107 AT2G13710 AT2G13710 [Mariner-like transposase family, has a 3.3e-55 P-value blast match to GB:AAC28384 mariner transposase (Mariner_TC1-element) (Glycine max)] 1.901 -0.467
108 AT5G28535 AT5G28535 [Mariner-like transposase family, has a 1.2e-97 P-value blast match to GB:AAC28384 mariner transposase (Mariner_TC1-element) (Glycine max)] 1.897 -0.467
109 AT2G13040 AT2G13040 [pseudogene] 1.892 -0.467
110 AT3G32091 AT3G32091 [gypsy-like retrotransposon family, has a 1.3e-109 P-value blast match to F1M23 reverse transcriptase (from Dan Voytas http://www.public.iastate.edu/~voytas) (Gypsy_Ty3-family)] 1.883 -0.467
111 AT5G27480 AT5G27480 [pseudogene] 1.883 -0.467
112 AT4G04550 AT4G04550 [copia-like retrotransposon family, has a 1.9e-10 P-value blast match to gb|AAG52950.1| putative envelope protein (Endovir1-1) (Arabidopsis thaliana) (Ty1_Copia-family)] 1.881 -0.467
113 AT4G06639 AT4G06639 unknown 1.877 -0.467
114 AT4G05632 AT4G05632 unknown 1.876 -0.467
115 AT1G36230 AT1G36230 unknown 1.876 -0.467
116 AT5G28820 AT5G28820 unknown 1.876 -0.467
117 AT5G32515 AT5G32515 [pseudogene] 1.876 -0.467
118 AT4G04310 AT4G04310 [pseudogene] 1.871 0.055
119 AT5G35470 AT5G35470 unknown 1.870 -0.467
120 AT1G40103 AT1G40103 [pseudogene] 1.870 -0.467
121 AT1G35614 AT1G35614 unknown 1.870 -0.467
122 AT3G10930 AT3G10930 unknown 1.870 -1.329
123 AT4G30110 AT4G30110 ATHMA2, ARABIDOPSIS HEAVY METAL ATPASE 2, HMA2, heavy metal atpase 2 1.863 1.251
124 AT5G36015 AT5G36015 [pseudogene] 1.863 -0.467
125 AT1G31358 AT1G31358 MIR404, microRNA404 1.862 -0.467
126 AT2G10833 AT2G10833 [pseudogene] 1.859 -0.467
127 AT5G57560 AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 1.847 -1.468
128 AT3G44170 AT3G44170 unknown 1.834 -0.467
129 AT3G48057 AT3G48057 MIR843A, microRNA843A 1.830 -0.467
130 AT4G04230 AT4G04230 [gypsy-like retrotransposon family, has a 1.3e-95 P-value blast match to T27D20 reverse transcriptase (from Dan Voytas http://www.public.iastate.edu/~voytas) (Gypsy_Ty3-family)] 1.828 -0.467
131 AT4G06479 AT4G06479 [zinc ion binding] 1.828 -0.467
132 AT5G28141 AT5G28141 [hAT-like transposase family (hobo/Ac/Tam3), has a 5.0e-54 P-value blast match to GB:CAA38906 Tam3-transposase (hAT-element) (Antirrhinum majus)] 1.828 -0.467
133 AT1G66640 AT1G66640 [RNI-like superfamily protein] 1.828 -0.467
134 AT4G19240 AT4G19240 unknown 1.828 -0.467
135 AT4G07490 AT4G07490 [transposon protein -related] 1.828 -0.467
136 AT2G16610 AT2G16610 [CACTA-like transposase family (En/Spm), has a 6.1e-89 P-value blast match to GB:BAA20532 ORF of transposon Tdc1 (CACTA-element) (Daucus carota)] 1.828 -0.467
137 AT2G10253 AT2G10253 [pseudogene] 1.828 -1.398
138 AT4G06564 AT4G06564 [gypsy-like retrotransposon family (Athila), has a 2.5e-114 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 1.828 -0.467
139 AT4G05616 AT4G05616 unknown 1.828 -0.467
140 AT5G32520 AT5G32520 [pseudogene] 1.810 -0.467
141 AT3G30668 AT3G30668 [gypsy-like retrotransposon family (Athila), has a 6.6e-229 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 1.807 -0.467
142 AT4G06682 AT4G06682 [copia-like retrotransposon family, has a 1.2e-196 P-value blast match to gb|AAG52949.1| gag/pol polyprotein (Endovir1-1) (Arabidopsis thaliana) (Ty1_Copia-family)] 1.801 -0.467
143 AT2G24070 AT2G24070 QWRF4, QWRF domain containing 4 1.801 -1.398
144 AT5G46195 AT5G46195 [hAT-like transposase family (hobo/Ac/Tam3), has a 8.8e-38 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)] 1.798 -0.467
145 AT1G28370 AT1G28370 ATERF11, ERF DOMAIN PROTEIN 11, ERF11, ERF domain protein 11 1.796 -1.178
146 AT2G11430 AT2G11430 [gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 1.796 -0.467
147 AT5G29037 AT5G29037 [gypsy-like retrotransposon family, has a 2.2e-209 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 1.794 -0.467
148 AT5G34845 AT5G34845 [pseudogene] 1.793 -0.467
149 AT3G42560 AT3G42560 [Pentatricopeptide repeat (PPR) superfamily protein] 1.793 -0.467
150 AT1G42080 AT1G42080 unknown 1.792 -0.467
151 AT4G05505 AT4G05505 [CACTA-like transposase family (Ptta/En/Spm), has a 1.2e-35 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 1.789 -0.467
152 AT5G33422 AT5G33422 [CACTA-like transposase family (Tnp2/En/Spm), has a 3.5e-121 P-value blast match to GB:CAA40555 TNP2 (CACTA-element) (Antirrhinum majus)] 1.785 -0.467
153 AT3G30650 AT3G30650 unknown 1.784 -0.467
154 AT3G28958 AT3G28958 [Cupredoxin superfamily protein] 1.784 -1.006
155 AT5G30406 AT5G30406 [gypsy-like retrotransposon family (Athila), has a 8.8e-131 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 1.779 -0.467
156 AT4G12915 AT4G12915 [gypsy-like retrotransposon family (Athila), has a 1.4e-20 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 1.778 -0.467
157 AT3G29727 AT3G29727 [non-LTR retrotransposon family (LINE), has a 5.9e-09 P-value blast match to GB:AAA67727 reverse transcriptase (LINE-element) (Mus musculus)] 1.778 -0.467
158 AT5G35926 AT5G35926 [Protein with RNI-like/FBD-like domains] 1.778 2.067
159 AT1G32040 AT1G32040 unknown 1.776 -0.467
160 AT4G06594 AT4G06594 [gypsy-like retrotransposon family, has a 5.1e-215 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 1.773 -0.467
161 AT3G33009 AT3G33009 [pseudogene] 1.770 -0.467
162 AT3G33163 AT3G33163 [pseudogene] 1.769 -0.467
163 ATCG01160 ATCG01160 RRN5S, ribosomal RNA5S -6.710 -0.901
164 AT2G27400 AT2G27400 TAS1A, trans-acting siRNA1A -6.262 0.819
165 AT2G39681 AT2G39681 TAS2, trans-acting siRNA2 -6.216 0.468
166 AT1G50055 AT1G50055 TAS1B, trans-acting siRNA1B -6.072 0.030
167 AT2G39675 AT2G39675 TAS1C, trans-acting siRNA1C -6.071 2.227
168 AT3G25795 AT3G25795 TAS4, trans acting siRNA 4 -5.340 -0.467
169 AT5G42980 AT5G42980 ATH3, thioredoxin H-type 3, ATTRX3, thioredoxin 3, ATTRXH3, TRX3, thioredoxin 3, TRXH3, THIOREDOXIN H3 -5.035 0.333
170 AT1G63150 AT1G63150 [Tetratricopeptide repeat (TPR)-like superfamily protein] -4.157 -0.252
171 AT3G17185 AT3G17185 ATTAS3, TAS3, trans-acting siRNA3, TASIR-ARF -3.720 0.060
172 AT5G49615 AT5G49615 TAS3b, trans-acting siRNA3B -3.551 -0.467
173 AT1G63630 AT1G63630 [Tetratricopeptide repeat (TPR)-like superfamily protein] -3.378 -0.467
174 AT1G63080 AT1G63080 [Pentatricopeptide repeat (PPR) superfamily protein] -3.353 -0.694
175 AT5G38850 AT5G38850 [Disease resistance protein (TIR-NBS-LRR class)] -2.864 0.759
176 AT3G49500 AT3G49500 RDR6, RNA-dependent RNA polymerase 6, SDE1, SILENCING DEFECTIVE 1, SGS2, SUPPRESSOR OF GENE SILENCING 2 -2.824 0.360
177 AT1G63130 AT1G63130 [Tetratricopeptide repeat (TPR)-like superfamily protein] -2.753 0.376
178 AT2G01020 AT2G01020 [5.8SrRNA] -2.016 0.897
179 AT4G16590 AT4G16590 ATCSLA01, cellulose synthase-like A01, ATCSLA1, CELLULOSE SYNTHASE-LIKE A1, CSLA01, CSLA01, cellulose synthase-like A01 -2.005 0.065
180 AT2G46070 AT2G46070 ATMPK12, MAPK12, MPK12, mitogen-activated protein kinase 12 -1.924 0.272
181 AT1G62930 AT1G62930 RPF3, RNA processing factor 3 -1.874 0.133
182 AT5G57735 AT5G57735 TASIR-ARF -1.717 -0.467
183 AT1G03530 AT1G03530 ATNAF1, NAF1, nuclear assembly factor 1 -1.669 0.897
184 AT5G43740 AT5G43740 [Disease resistance protein (CC-NBS-LRR class) family] -1.613 0.122
185 AT4G15210 AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 -1.598 0.600
186 AT2G01010 AT2G01010 [18SrRNA] -1.369 0.453
187 AT2G37240 AT2G37240 [Thioredoxin superfamily protein] -1.312 -0.247
188 AT5G25090 AT5G25090 AtENODL13, ENODL13, early nodulin-like protein 13 -1.312 -1.006
189 AT3G55500 AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 -1.243 1.360
190 AT1G14250 AT1G14250 [GDA1/CD39 nucleoside phosphatase family protein] -1.140 0.009
191 AT3G19810 AT3G19810 unknown -1.111 0.241
192 AT1G11160 AT1G11160 [Transducin/WD40 repeat-like superfamily protein] -1.073 0.989
193 AT4G01080 AT4G01080 TBL26, TRICHOME BIREFRINGENCE-LIKE 26 -1.053 -0.190
194 AT3G10690 AT3G10690 GYRA, DNA GYRASE A -0.916 0.723
195 AT3G17170 AT3G17170 RFC3, REGULATOR OF FATTY-ACID COMPOSITION 3 -0.875 0.900
196 AT3G11660 AT3G11660 NHL1, NDR1/HIN1-like 1 -0.860 0.404
197 AT3G18390 AT3G18390 EMB1865, embryo defective 1865 -0.815 -0.136
198 AT5G49940 AT5G49940 ATCNFU2, CHLOROPLAST-LOCALIZED NIFU-LIKE PROTEIN 2, NFU2, NIFU-like protein 2 -0.793 -0.037
199 AT1G69530 AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 -0.788 -0.288
200 AT5G17710 AT5G17710 EMB1241, embryo defective 1241 -0.737 -0.258
201 AT3G16250 AT3G16250 NDF4, NDH-dependent cyclic electron flow 1, PnsB3, Photosynthetic NDH subcomplex B 3 -0.719 0.291
202 AT3G04550 AT3G04550 unknown -0.706 -0.179
203 AT1G14370 AT1G14370 APK2A, protein kinase 2A, Kin1, kinase 1, PBL2, PBS1-like 2 -0.704 0.829
204 AT4G34035 AT4G34035 [tRNA-Arg (anticodon: TCT)] -0.698 -0.467
205 AT1G51060 AT1G51060 HTA10, histone H2A 10 -0.686 0.130
206 AT5G34790 AT5G34790 [CACTA-like transposase family (Ptta/En/Spm), has a 2.9e-11 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -0.641 0.946
207 AT2G22280 AT2G22280 [tRNA-Arg (anticodon: ACG)] -0.625 -0.467
208 AT3G47650 AT3G47650 [DnaJ/Hsp40 cysteine-rich domain superfamily protein] -0.612 0.418
209 AT3G02715 AT3G02715 [tRNA-Ser (anticodon: AGA)] -0.605 -0.467
210 ATCG00370 ATCG00370 TRNS.3 -0.602 -0.004
211 AT5G15970 AT5G15970 AtCor6.6, COR6.6, COLD-RESPONSIVE 6.6, KIN2 -0.591 0.343
212 AT5G13630 AT5G13630 ABAR, ABA-BINDING PROTEIN, CCH, CONDITIONAL CHLORINA, CCH1, CHLH, H SUBUNIT OF MG-CHELATASE, GUN5, GENOMES UNCOUPLED 5 -0.586 -0.120
213 AT3G26570 AT3G26570 ORF02, PHT2;1, phosphate transporter 2;1 -0.567 0.252
214 AT4G39800 AT4G39800 ATIPS1, INOSITOL 3-PHOSPHATE SYNTHASE 1, ATMIPS1, MYO-INOSITOL-1-PHOSPHATE SYNTHASE 1, MI-1-P SYNTHASE, MIPS1, D-myo-Inositol 3-Phosphate Synthase 1, MIPS1, myo-inositol-1-phosphate synthase 1 -0.566 0.230
215 AT5G49910 AT5G49910 cpHsc70-2, chloroplast heat shock protein 70-2, HSC70-7, HEAT SHOCK PROTEIN 70-7 -0.546 0.323
216 AT2G26080 AT2G26080 AtGLDP2, glycine decarboxylase P-protein 2, GLDP2, glycine decarboxylase P-protein 2 -0.529 -0.380
217 AT1G09780 AT1G09780 iPGAM1, 2,3-biphosphoglycerate-independent phosphoglycerate mutase 1 -0.520 0.037
218 AT5G56030 AT5G56030 AtHsp90.2, HEAT SHOCK PROTEIN 90.2, ERD8, EARLY-RESPONSIVE TO DEHYDRATION 8, HSP81-2, heat shock protein 81-2, HSP81.2, heat shock protein 81.2, HSP90.2, HEAT SHOCK PROTEIN 90.2 -0.518 0.472
219 ATCG00250 ATCG00250 TRNE -0.514 0.537
220 AT1G62390 AT1G62390 CLMP1, CLUMPED CHLOROPLASTS 1, Phox2, Phox2 -0.508 -0.082
221 AT3G09440 AT3G09440 [Heat shock protein 70 (Hsp 70) family protein] -0.507 0.436
222 AT5G52310 AT5G52310 COR78, COLD REGULATED 78, LTI140, LTI78, LOW-TEMPERATURE-INDUCED 78, RD29A, RESPONSIVE TO DESSICATION 29A -0.500 -0.031
223 AT4G29840 AT4G29840 Pyridoxal-5'-phosphate-dependent enzyme family protein -0.496 0.049
224 AT5G47110 AT5G47110 LIL3:2 -0.493 -0.077
225 AT2G47450 AT2G47450 CAO, CHAOS, CPSRP43, CHLOROPLAST SIGNAL RECOGNITION PARTICLE 43 -0.493 0.555
226 AT4G29060 AT4G29060 emb2726, embryo defective 2726 -0.492 -0.467
227 AT5G58495 AT5G58495 [tRNA-Ser (anticodon: CGA)] -0.492 -0.467
228 ATCG00490 ATCG00490 RBCL -0.487 -0.607
229 AT3G54050 AT3G54050 HCEF1, high cyclic electron flow 1 -0.474 -0.270
230 AT3G56910 AT3G56910 PSRP5, plastid-specific 50S ribosomal protein 5 -0.465 0.009
231 AT5G56010 AT5G56010 AtHsp90-3, HEAT SHOCK PROTEIN 90-3, AtHsp90.3, HEAT SHOCK PROTEIN 90.3, HSP81-3, heat shock protein 81-3, Hsp81.3, HEAT SHOCK PROTEIN 81.3 -0.463 0.641
232 AT5G12860 AT5G12860 DiT1, dicarboxylate transporter 1 -0.450 -0.293
233 AT1G10522 AT1G10522 PRIN2, PLASTID REDOX INSENSITIVE 2 -0.435 1.364
234 AT3G16140 AT3G16140 PSAH-1, photosystem I subunit H-1 -0.428 0.465
235 AT4G27440 AT4G27440 PORB, protochlorophyllide oxidoreductase B -0.416 1.547
236 AT2G29630 AT2G29630 PY, PYRIMIDINE REQUIRING, THIC, thiaminC -0.411 -0.186
237 AT1G61520 AT1G61520 LHCA3, photosystem I light harvesting complex gene 3 -0.403 0.380
238 AT2G28000 AT2G28000 CH-CPN60A, CHLOROPLAST CHAPERONIN 60ALPHA, CPN60A, chaperonin-60alpha, Cpn60alpha1, chaperonin-60alpha1, SLP, SCHLEPPERLESS -0.399 0.246
239 AT1G15090 AT1G15090 [tRNA-Asn (anticodon: GTT)] -0.398 -0.467
240 ATMG00020 ATMG00020 RRN26, ribosomal RNA26S -0.390 -0.061
241 AT1G12900 AT1G12900 GAPA-2, glyceraldehyde 3-phosphate dehydrogenase A subunit 2 -0.383 -0.029
242 AT1G06680 AT1G06680 OE23, OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA, OEE2, OXYGEN-EVOLVING ENHANCER PROTEIN 2, PSBP-1, photosystem II subunit P-1, PSII-P, PHOTOSYSTEM II SUBUNIT P -0.378 0.620
243 AT4G33010 AT4G33010 AtGLDP1, glycine decarboxylase P-protein 1, GLDP1, glycine decarboxylase P-protein 1 -0.377 -0.098
244 AT3G47470 AT3G47470 CAB4, LHCA4, light-harvesting chlorophyll-protein complex I subunit A4 -0.373 0.494
245 AT5G23665 AT5G23665 [tRNA-Gln (anticodon: TTG)] -0.365 -0.467
246 ATCG00550 ATCG00550 PSBJ, photosystem II reaction center protein J -0.364 0.640
247 AT2G37220 AT2G37220 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.360 -0.097
248 AT5G26000 AT5G26000 AtTGG1, BGLU38, BETA GLUCOSIDASE 38, TGG1, thioglucoside glucohydrolase 1 -0.359 -0.122
249 AT3G42240 AT3G42240 unknown -0.356 -0.467
250 AT5G01530 AT5G01530 LHCB4.1, light harvesting complex photosystem II -0.355 0.588
251 ATCG01060 ATCG01060 PSAC -0.343 0.161
252 AT5G38410 AT5G38410 RBCS3B, Rubisco small subunit 3B -0.338 -0.028
253 AT4G34950 AT4G34950 [Major facilitator superfamily protein] -0.332 0.726
254 AT4G10340 AT4G10340 LHCB5, light harvesting complex of photosystem II 5 -0.324 0.446