4.0:Information of module
QC pSCR 3h BL
In comparison with root columella root cap 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009642 response to light intensity BP 6.184e-05
GO:0009733 response to auxin BP 5.747e-04
GO:0009644 response to high light intensity BP 6.812e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0032870 cellular response to hormone stimulus BP 9.584e-08
GO:0071495 cellular response to endogenous stimulus BP 1.037e-07
GO:0009719 response to endogenous stimulus BP 1.103e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
QC pSCR 3h BL		 Log2 signal ratio
root columella root cap 40 mM NaCl
1 AT1G52690 AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 3.347 0.480
2 AT4G12410 AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 2.934 0.487
3 AT2G26150 AT2G26150 ATHSFA2, heat shock transcription factor A2, HSFA2, heat shock transcription factor A2 2.917 0.264
4 AT1G29500 AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 2.521 -0.011
5 AT4G21745 AT4G21745 [PAK-box/P21-Rho-binding family protein] 2.487 no data
6 AT3G05936 AT3G05936 unknown 2.303 no data
7 AT2G31540 AT2G31540 [GDSL-like Lipase/Acylhydrolase superfamily protein] 2.303 no data
8 AT1G19530 AT1G19530 unknown 2.088 0.081
9 AT1G26210 AT1G26210 ATSOFL1, SOB FIVE-LIKE 1, SOFL1, SOB five-like 1 1.978 0.005
10 AT4G21870 AT4G21870 [HSP20-like chaperones superfamily protein] 1.916 0.028
11 AT3G14370 AT3G14370 WAG2 1.767 -0.333
12 AT5G66080 AT5G66080 APD9, Arabidopsis Pp2c clade D 9 -3.711 -0.085
13 AT1G68825 AT1G68825 DVL5, DEVIL 5, RTFL15, ROTUNDIFOLIA like 15 -3.125 no data
14 AT1G28360 AT1G28360 ATERF12, ERF DOMAIN PROTEIN 12, ERF12, ERF domain protein 12 -2.935 -0.067
15 AT3G12900 AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -2.880 -0.088
16 AT1G03800 AT1G03800 ATERF10, ARABIDOPSIS THALIANA RF DOMAIN PROTEIN 10, ERF10, ERF domain protein 10 -2.745 no data
17 AT3G49630 AT3G49630 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -2.716 -0.067
18 AT3G62760 AT3G62760 ATGSTF13 -2.650 -0.136
19 AT5G22580 AT5G22580 [Stress responsive A/B Barrel Domain] -2.597 0.031
20 AT1G26870 AT1G26870 ANAC009, Arabidopsis NAC domain containing protein 9, FEZ, FEZ -2.391 -0.396
21 AT3G26120 AT3G26120 terminal EAR1-like 1 -2.377 0.050