4.0:Information of module
stele pSHR 8h BL
In comparison with root cap pGL2(QC pSCRBRI1) 8h BL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015698 inorganic anion transport BP 6.565e-14
GO:1901700 response to oxygen-containing compound BP 7.145e-14
GO:0010167 response to nitrate BP 1.396e-13
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009628 response to abiotic stimulus BP 3.061e-08
GO:0010817 regulation of hormone levels BP 1.014e-06
GO:0009812 flavonoid metabolic process BP 1.273e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
stele pSHR 8h BL		 Log2 signal ratio
root cap pGL2(QC pSCRBRI1) 8h BL
1 AT5G24640 AT5G24640 unknown 4.986 -1.028
2 AT2G04050 AT2G04050 [MATE efflux family protein] 4.348 -0.108
3 AT4G08620 AT4G08620 SULTR1;1, sulphate transporter 1;1 4.301 0.908
4 AT1G13710 AT1G13710 CYP78A5, cytochrome P450, family 78, subfamily A, polypeptide 5, KLU, KLUH 3.639 -0.108
5 AT1G60050 AT1G60050 UMAMIT35, Usually multiple acids move in and out Transporters 35 3.561 0.571
6 AT1G18400 AT1G18400 BEE1, BR enhanced expression 1 2.772 0.758
7 AT3G07250 AT3G07250 [nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein] 2.655 1.297
8 AT5G18910 AT5G18910 [Protein kinase superfamily protein] 2.445 0.630
9 AT3G18890 AT3G18890 AtTic62, translocon at the inner envelope membrane of chloroplasts 62, Tic62, translocon at the inner envelope membrane of chloroplasts 62 2.396 -0.687
10 AT3G28750 AT3G28750 unknown 2.330 0.420
11 AT1G15330 AT1G15330 [Cystathionine beta-synthase (CBS) protein] 2.312 1.648
12 AT2G17680 AT2G17680 unknown 2.248 -0.055
13 AT1G28160 AT1G28160 [Integrase-type DNA-binding superfamily protein] 2.219 -1.588
14 AT3G19320 AT3G19320 [Leucine-rich repeat (LRR) family protein] 2.145 1.580
15 AT3G61400 AT3G61400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 2.006 1.250
16 AT3G48390 AT3G48390 [MA3 domain-containing protein] 1.962 -0.283
17 AT1G23060 AT1G23060 MDP40, MICROTUBULE DESTABILIZING PROTEIN 40 1.924 0.100
18 AT3G46270 AT3G46270 [receptor protein kinase-related] 1.878 0.479
19 AT4G26260 AT4G26260 MIOX4, myo-inositol oxygenase 4 1.877 1.988
20 AT5G04120 AT5G04120 [Phosphoglycerate mutase family protein] 1.780 0.673
21 AT4G28900 AT4G28900 [copia-like retrotransposon family, has a 7.7e-236 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays)] 1.733 0.441
22 AT5G60810 AT5G60810 GLV11, GOLVEN 11, RGF1, root meristem growth factor 1 1.669 0.450
23 AT3G56000 AT3G56000 ATCSLA14, ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE A14, CSLA14, cellulose synthase like A14 1.643 0.604
24 AT1G53700 AT1G53700 PK3AT, PROTEIN KINASE 3 ARABIDOPSIS THALIANA, WAG1, WAG 1 1.629 1.152
25 AT5G15290 AT5G15290 CASP5, Casparian strip membrane domain protein 5 1.616 0.925
26 AT5G54790 AT5G54790 unknown 1.595 0.661
27 AT2G39010 AT2G39010 PIP2;6, PLASMA MEMBRANE INTRINSIC PROTEIN 2;6, PIP2E, plasma membrane intrinsic protein 2E 1.587 -0.182
28 AT2G44370 AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] 1.582 1.776
29 AT1G76800 AT1G76800 [Vacuolar iron transporter (VIT) family protein] 1.577 -0.404
30 AT4G01430 AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 1.566 0.163
31 AT1G60095 AT1G60095 [Mannose-binding lectin superfamily protein] 1.557 1.189
32 AT1G14540 AT1G14540 PER4, peroxidase 4 1.534 1.735
33 AT4G29180 AT4G29180 RHS16, root hair specific 16 1.508 0.565
34 AT4G37390 AT4G37390 AUR3, AUXIN UPREGULATED 3, BRU6, GH3-2, GH3.2, YDK1, YADOKARI 1 1.492 1.240
35 AT1G21525 AT1G21525 [expressed protein] 1.491 0.578
36 AT2G03760 AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 1.452 -0.377
37 AT3G18200 AT3G18200 UMAMIT4, Usually multiple acids move in and out Transporters 4 1.451 0.490
38 AT1G09932 AT1G09932 [Phosphoglycerate mutase family protein] 1.439 2.174
39 AT2G05540 AT2G05540 [Glycine-rich protein family] 1.433 -1.374
40 AT4G25560 AT4G25560 AtMYB18, myb domain protein 18, LAF1, LONG AFTER FAR-RED LIGHT 1, MYB18, myb domain protein 18 1.419 1.302
41 AT5G19560 AT5G19560 ATROPGEF10, ARABIDOPSIS THALIANA ROP UANINE NUCLEOTIDE EXCHANGE FACTOR 10, GEF10, guanine exchange factor 10, ROPGEF10, ROP (rho of plants) guanine nucleotide exchange factor 10 1.407 0.304
42 AT5G49360 AT5G49360 ATBXL1, BETA-XYLOSIDASE 1, BXL1, beta-xylosidase 1 1.377 0.324
43 AT4G01390 AT4G01390 [TRAF-like family protein] 1.371 0.643
44 AT3G02000 AT3G02000 ROXY1 1.367 1.629
45 AT1G11080 AT1G11080 scpl31, serine carboxypeptidase-like 31 1.348 0.152
46 AT4G38400 AT4G38400 ATEXLA2, expansin-like A2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, expansin-like A2, EXPL2, EXPANSIN L2 1.346 1.687
47 AT4G08950 AT4G08950 EXO, EXORDIUM 1.328 1.438
48 AT2G39510 AT2G39510 UMAMIT14, Usually multiple acids move in and out Transporters 14 1.308 0.220
49 AT3G62320 AT3G62320 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -4.344 -0.127
50 AT2G15780 AT2G15780 [Cupredoxin superfamily protein] -4.097 -0.123
51 AT5G38940 AT5G38940 [RmlC-like cupins superfamily protein] -3.687 -1.523
52 AT5G22580 AT5G22580 [Stress responsive A/B Barrel Domain] -3.662 -0.346
53 AT3G62760 AT3G62760 ATGSTF13 -3.354 -1.727
54 AT1G70680 AT1G70680 [Caleosin-related family protein] -3.136 -0.108
55 AT5G62210 AT5G62210 [Embryo-specific protein 3, (ATS3)] -2.952 -2.337
56 AT3G26120 AT3G26120 terminal EAR1-like 1 -2.818 0.065
57 AT4G33145 AT4G33145 unknown -2.795 -1.411
58 AT2G05330 AT2G05330 [BTB/POZ domain-containing protein] -2.765 -0.446
59 AT3G19500 AT3G19500 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -2.612 -1.111
60 AT2G46850 AT2G46850 [Protein kinase superfamily protein] -2.552 -0.468
61 AT5G24780 AT5G24780 ATVSP1, VSP1, vegetative storage protein 1 -2.452 -0.937
62 AT3G09120 AT3G09120 unknown -2.443 -0.122
63 AT5G66080 AT5G66080 APD9, Arabidopsis Pp2c clade D 9 -2.434 -0.982
64 AT3G09110 AT3G09110 unknown -2.380 -0.114
65 AT5G57785 AT5G57785 unknown -2.343 -1.190
66 AT3G15670 AT3G15670 [Late embryogenesis abundant protein (LEA) family protein] -2.311 1.390
67 AT4G09940 AT4G09940 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -2.261 -0.122
68 AT3G27950 AT3G27950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -2.257 -0.774
69 AT4G31380 AT4G31380 FLP1, FPF1-like protein 1 -2.186 -0.108
70 AT3G22120 AT3G22120 CWLP, cell wall-plasma membrane linker protein -2.008 -0.384
71 AT1G74500 AT1G74500 ATBS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, bHLH135, basic helix-loop-helix protein 135, BS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, PRE3, PACLOBUTRAZOL RESISTANCE 3, TMO7, TARGET OF MONOPTEROS 7 -1.905 -0.565
72 AT5G47600 AT5G47600 [HSP20-like chaperones superfamily protein] -1.882 -1.042
73 AT3G16300 AT3G16300 [Uncharacterised protein family (UPF0497)] -1.853 -0.661
74 AT2G04025 AT2G04025 GLV7, GOLVEN 7, RGF3, root meristem growth factor 3 -1.815 -0.732
75 AT1G68825 AT1G68825 DVL5, DEVIL 5, RTFL15, ROTUNDIFOLIA like 15 -1.732 -0.809
76 AT1G05835 AT1G05835 [PHD finger protein] -1.709 -0.927
77 AT2G24270 AT2G24270 ALDH11A3, aldehyde dehydrogenase 11A3 -1.674 -0.343
78 AT4G33800 AT4G33800 unknown -1.603 -0.355
79 AT3G30725 AT3G30725 AtGDU6, glutamine dumper 6, GDU6, glutamine dumper 6 -1.603 -0.421
80 AT3G50610 AT3G50610 unknown -1.595 -1.461
81 AT5G48100 AT5G48100 ATLAC15, AtTT10, LAC15, LACCASE-LIKE 15, TT10, TRANSPARENT TESTA 10 -1.558 0.420
82 AT5G38020 AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -1.513 -1.510
83 AT1G59940 AT1G59940 ARR3, response regulator 3 -1.503 -0.928
84 AT4G28703 AT4G28703 [RmlC-like cupins superfamily protein] -1.488 0.187
85 AT2G05510 AT2G05510 [Glycine-rich protein family] -1.474 -0.717
86 AT5G15725 AT5G15725 GLV9, GOLVEN 9 -1.459 -0.626
87 AT2G17080 AT2G17080 unknown -1.418 -0.733
88 AT2G41990 AT2G41990 unknown -1.347 -0.346
89 AT4G11190 AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -1.322 -1.809
90 AT1G28190 AT1G28190 unknown -1.292 -0.277
91 AT3G30180 AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 -1.272 -1.436
92 AT1G26680 AT1G26680 [transcriptional factor B3 family protein] -1.269 0.499
93 AT1G67090 AT1G67090 RBCS1A, ribulose bisphosphate carboxylase small chain 1A -1.250 -0.080
94 AT2G22590 AT2G22590 [UDP-Glycosyltransferase superfamily protein] -1.230 -1.150
95 AT1G30530 AT1G30530 UGT78D1, UDP-glucosyl transferase 78D1 -1.165 -1.207